RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
PRDM1-203ENST00000369096 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
PRDM1-203ENST00000369096 PELP1Q8IZL8 1130 aaKnown RBP25.53■■□□□ 1.68
PRDM1-203ENST00000369096 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
PRDM1-203ENST00000369096 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
PRDM1-203ENST00000369096 APLP2Q06481 763 aa24.65■■□□□ 1.54
PRDM1-203ENST00000369096 ERICH6Q7L0X2 663 aa24.6■■□□□ 1.53
PRDM1-203ENST00000369096 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
PRDM1-203ENST00000369096 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
PRDM1-203ENST00000369096 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
PRDM1-203ENST00000369096 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
PRDM1-203ENST00000369096 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
PRDM1-203ENST00000369096 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
PRDM1-203ENST00000369096 NEFLP07196 543 aa23.86■■□□□ 1.41
PRDM1-203ENST00000369096 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
PRDM1-203ENST00000369096 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
PRDM1-203ENST00000369096 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
PRDM1-203ENST00000369096 MYT1Q01538 1121 aa23.71■■□□□ 1.39
PRDM1-203ENST00000369096 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
PRDM1-203ENST00000369096 DAXXQ9UER7 740 aaPredicted RBP23.42■■□□□ 1.34
PRDM1-203ENST00000369096 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
PRDM1-203ENST00000369096 UBTFP17480 764 aaKnown RBP23.32■■□□□ 1.32
PRDM1-203ENST00000369096 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
PRDM1-203ENST00000369096 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
PRDM1-203ENST00000369096 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
PRDM1-203ENST00000369096 MYT1LQ9UL68 1186 aa22.94■■□□□ 1.26
PRDM1-203ENST00000369096 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
PRDM1-203ENST00000369096 ITGAEP38570 1179 aa22.85■■□□□ 1.25
PRDM1-203ENST00000369096 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
PRDM1-203ENST00000369096 CLSPNQ9HAW4 1339 aa22.79■■□□□ 1.24
PRDM1-203ENST00000369096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
PRDM1-203ENST00000369096 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
PRDM1-203ENST00000369096 HRCP23327 699 aa22.73■■□□□ 1.23
PRDM1-203ENST00000369096 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
PRDM1-203ENST00000369096 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
PRDM1-203ENST00000369096 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
PRDM1-203ENST00000369096 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
PRDM1-203ENST00000369096 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
PRDM1-203ENST00000369096 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
PRDM1-203ENST00000369096 BCANQ96GW7 911 aa22.26■■□□□ 1.15
PRDM1-203ENST00000369096 ZBTB47Q9UFB7 747 aaPredicted RBP22.25■■□□□ 1.15
PRDM1-203ENST00000369096 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
PRDM1-203ENST00000369096 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
PRDM1-203ENST00000369096 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
PRDM1-203ENST00000369096 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
PRDM1-203ENST00000369096 FAM50AQ14320 339 aaKnown RBP22.04■■□□□ 1.12
PRDM1-203ENST00000369096 SLC24A1O60721 1099 aa22.04■■□□□ 1.12
PRDM1-203ENST00000369096 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
PRDM1-203ENST00000369096 GTF3C3Q9Y5Q9 886 aa22■■□□□ 1.11
PRDM1-203ENST00000369096 ZNF326Q5BKZ1 582 aaKnown RBP21.98■■□□□ 1.11
PRDM1-203ENST00000369096 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
PRDM1-203ENST00000369096 ANP32CO43423 234 aa21.94■■□□□ 1.1
PRDM1-203ENST00000369096 EIF5BO60841 1220 aaKnown RBP21.91■■□□□ 1.1
PRDM1-203ENST00000369096 NEFMP07197 916 aa21.82■■□□□ 1.08
PRDM1-203ENST00000369096 ANP32AP39687 249 aaKnown RBP21.82■■□□□ 1.08
PRDM1-203ENST00000369096 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
PRDM1-203ENST00000369096 ANP32BQ92688 251 aaKnown RBP21.75■■□□□ 1.07
PRDM1-203ENST00000369096 HSP90AA1P07900 732 aaKnown RBP21.66■■□□□ 1.06
PRDM1-203ENST00000369096 GLIPR1L2Q4G1C9 344 aa21.56■■□□□ 1.04
PRDM1-203ENST00000369096 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
PRDM1-203ENST00000369096 UPF2Q9HAU5 1272 aaKnown RBP21.48■■□□□ 1.03
PRDM1-203ENST00000369096 ACIN1Q9UKV3 1341 aaKnown RBP21.46■■□□□ 1.03
PRDM1-203ENST00000369096 FBLN2P98095 1184 aa21.41■■□□□ 1.02
PRDM1-203ENST00000369096 FKBP8Q14318 412 aa21.39■■□□□ 1.01
PRDM1-203ENST00000369096 ARXQ96QS3 562 aa21.39■■□□□ 1.01
PRDM1-203ENST00000369096 ABCC9O60706 1549 aa21.32■■□□□ 1
PRDM1-203ENST00000369096 ARID3CA6NKF2 412 aa21.31■■□□□ 1
PRDM1-203ENST00000369096 NBR1Q14596 966 aa21.29■■□□□ 1
PRDM1-203ENST00000369096 SCRIBQ14160 1630 aa21.29■■□□□ 1
PRDM1-203ENST00000369096 HNRNPUQ00839 825 aaKnown RBP eCLIP21.27■■□□□ 1
PRDM1-203ENST00000369096 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
PRDM1-203ENST00000369096 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
PRDM1-203ENST00000369096 CDK11BP21127 795 aaKnown RBP21.24■□□□□ 0.99
PRDM1-203ENST00000369096 FAM9BQ8IZU0 186 aa21.22■□□□□ 0.99
PRDM1-203ENST00000369096 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
PRDM1-203ENST00000369096 CHGAP10645 457 aaKnown RBP21.2■□□□□ 0.98
PRDM1-203ENST00000369096 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.2■□□□□ 0.98
PRDM1-203ENST00000369096 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
PRDM1-203ENST00000369096 CCDC136Q96JN2 1154 aa21.19■□□□□ 0.98
PRDM1-203ENST00000369096 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
PRDM1-203ENST00000369096 STAG3Q9UJ98 1225 aa21.15■□□□□ 0.98
PRDM1-203ENST00000369096 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
PRDM1-203ENST00000369096 DDX10Q13206 875 aaKnown RBP21.08■□□□□ 0.96
PRDM1-203ENST00000369096 TONSLQ96HA7 1378 aa21.06■□□□□ 0.96
PRDM1-203ENST00000369096 TMC1Q8TDI8 760 aa21.06■□□□□ 0.96
PRDM1-203ENST00000369096 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
PRDM1-203ENST00000369096 WDR43Q15061 677 aaKnown RBP eCLIP20.98■□□□□ 0.95
PRDM1-203ENST00000369096 TRIM44Q96DX7 344 aaPredicted RBP20.98■□□□□ 0.95
PRDM1-203ENST00000369096 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
PRDM1-203ENST00000369096 MYH16Q9H6N6 1097 aa20.96■□□□□ 0.95
PRDM1-203ENST00000369096 A0A0G2JS52 829 aa20.96■□□□□ 0.95
PRDM1-203ENST00000369096 NACADO15069 1562 aa20.95■□□□□ 0.94
PRDM1-203ENST00000369096 NCLP19338 710 aaKnown RBP20.93■□□□□ 0.94
PRDM1-203ENST00000369096 MRS2Q9HD23 443 aa20.91■□□□□ 0.94
PRDM1-203ENST00000369096 TNNT2P45379 298 aaPredicted RBP20.91■□□□□ 0.94
PRDM1-203ENST00000369096 IRX6P78412 446 aaPredicted RBP20.91■□□□□ 0.94
PRDM1-203ENST00000369096 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
PRDM1-203ENST00000369096 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
PRDM1-203ENST00000369096 BECN1Q14457 450 aa20.85■□□□□ 0.93
PRDM1-203ENST00000369096 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms