RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
SBSPON-201ENST00000297354 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
SBSPON-201ENST00000297354 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
SBSPON-201ENST00000297354 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
SBSPON-201ENST00000297354 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
SBSPON-201ENST00000297354 HRCP23327 699 aa27.67■■■□□ 2.02
SBSPON-201ENST00000297354 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
SBSPON-201ENST00000297354 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
SBSPON-201ENST00000297354 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.91
SBSPON-201ENST00000297354 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
SBSPON-201ENST00000297354 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
SBSPON-201ENST00000297354 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
SBSPON-201ENST00000297354 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
SBSPON-201ENST00000297354 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
SBSPON-201ENST00000297354 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
SBSPON-201ENST00000297354 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
SBSPON-201ENST00000297354 ZEB1P37275 1124 aaPredicted RBP26.12■■□□□ 1.77
SBSPON-201ENST00000297354 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
SBSPON-201ENST00000297354 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
SBSPON-201ENST00000297354 CENPBP07199 599 aaPredicted RBP25.97■■□□□ 1.75
SBSPON-201ENST00000297354 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.74
SBSPON-201ENST00000297354 MYT1Q01538 1121 aa25.9■■□□□ 1.74
SBSPON-201ENST00000297354 NEUROD1Q13562 356 aa25.83■■□□□ 1.72
SBSPON-201ENST00000297354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.81■■□□□ 1.72
SBSPON-201ENST00000297354 ACIN1Q9UKV3 1341 aaKnown RBP25.77■■□□□ 1.72
SBSPON-201ENST00000297354 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
SBSPON-201ENST00000297354 DIEXFQ68CQ4 756 aaKnown RBP25.61■■□□□ 1.69
SBSPON-201ENST00000297354 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
SBSPON-201ENST00000297354 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SBSPON-201ENST00000297354 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
SBSPON-201ENST00000297354 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
SBSPON-201ENST00000297354 BCANQ96GW7 911 aa24.88■■□□□ 1.57
SBSPON-201ENST00000297354 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
SBSPON-201ENST00000297354 MIER1Q8N108 512 aa24.82■■□□□ 1.56
SBSPON-201ENST00000297354 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
SBSPON-201ENST00000297354 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
SBSPON-201ENST00000297354 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
SBSPON-201ENST00000297354 APLP2Q06481 763 aa24.55■■□□□ 1.52
SBSPON-201ENST00000297354 ERICH6Q7L0X2 663 aa24.54■■□□□ 1.52
SBSPON-201ENST00000297354 ANP32EQ9BTT0 268 aa24.38■■□□□ 1.49
SBSPON-201ENST00000297354 NEFLP07196 543 aa24.36■■□□□ 1.49
SBSPON-201ENST00000297354 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
SBSPON-201ENST00000297354 ITGAEP38570 1179 aa24.3■■□□□ 1.48
SBSPON-201ENST00000297354 SUPT16HQ9Y5B9 1047 aaKnown RBP24.3■■□□□ 1.48
SBSPON-201ENST00000297354 FKBP8Q14318 412 aa24.22■■□□□ 1.47
SBSPON-201ENST00000297354 TSHZ2Q9NRE2 1034 aa24.16■■□□□ 1.46
SBSPON-201ENST00000297354 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
SBSPON-201ENST00000297354 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.42
SBSPON-201ENST00000297354 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
SBSPON-201ENST00000297354 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
SBSPON-201ENST00000297354 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
SBSPON-201ENST00000297354 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
SBSPON-201ENST00000297354 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
SBSPON-201ENST00000297354 RBM19Q9Y4C8 960 aaKnown RBP23.79■■□□□ 1.4
SBSPON-201ENST00000297354 ATP1B4Q9UN42 357 aaPredicted RBP23.76■■□□□ 1.39
SBSPON-201ENST00000297354 NBR1Q14596 966 aa23.75■■□□□ 1.39
SBSPON-201ENST00000297354 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
SBSPON-201ENST00000297354 CEP162Q5TB80 1403 aa23.7■■□□□ 1.38
SBSPON-201ENST00000297354 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
SBSPON-201ENST00000297354 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.37
SBSPON-201ENST00000297354 SCRIBQ14160 1630 aa23.64■■□□□ 1.37
SBSPON-201ENST00000297354 ABCC9O60706 1549 aa23.62■■□□□ 1.37
SBSPON-201ENST00000297354 ANP32CO43423 234 aa23.54■■□□□ 1.36
SBSPON-201ENST00000297354 RTN4Q9NQC3 1192 aaKnown RBP23.52■■□□□ 1.36
SBSPON-201ENST00000297354 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
SBSPON-201ENST00000297354 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
SBSPON-201ENST00000297354 DEKP35659 375 aaKnown RBP23.42■■□□□ 1.34
SBSPON-201ENST00000297354 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
SBSPON-201ENST00000297354 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
SBSPON-201ENST00000297354 SOGA1O94964 1423 aa23.4■■□□□ 1.34
SBSPON-201ENST00000297354 PRKCSHP14314 528 aaPredicted RBP23.39■■□□□ 1.33
SBSPON-201ENST00000297354 POLR3GLQ9BT43 218 aa23.36■■□□□ 1.33
SBSPON-201ENST00000297354 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
SBSPON-201ENST00000297354 CCDC136Q96JN2 1154 aa23.32■■□□□ 1.32
SBSPON-201ENST00000297354 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
SBSPON-201ENST00000297354 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
SBSPON-201ENST00000297354 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
SBSPON-201ENST00000297354 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
SBSPON-201ENST00000297354 MSH5O43196 834 aa23.27■■□□□ 1.32
SBSPON-201ENST00000297354 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
SBSPON-201ENST00000297354 B4GALNT3Q6L9W6 998 aa23.23■■□□□ 1.31
SBSPON-201ENST00000297354 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
SBSPON-201ENST00000297354 ANO8Q9HCE9 1232 aaPredicted RBP23.23■■□□□ 1.31
SBSPON-201ENST00000297354 CLIP1P30622 1438 aa23.22■■□□□ 1.31
SBSPON-201ENST00000297354 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
SBSPON-201ENST00000297354 ABCC8Q09428 1581 aa23.2■■□□□ 1.31
SBSPON-201ENST00000297354 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
SBSPON-201ENST00000297354 ANP32AP39687 249 aaKnown RBP23.1■■□□□ 1.29
SBSPON-201ENST00000297354 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
SBSPON-201ENST00000297354 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
SBSPON-201ENST00000297354 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
SBSPON-201ENST00000297354 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
SBSPON-201ENST00000297354 NOP58Q9Y2X3 529 aaKnown RBP23.03■■□□□ 1.28
SBSPON-201ENST00000297354 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
SBSPON-201ENST00000297354 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
SBSPON-201ENST00000297354 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
SBSPON-201ENST00000297354 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
SBSPON-201ENST00000297354 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
SBSPON-201ENST00000297354 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
SBSPON-201ENST00000297354 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms