RNA–Protein interactions for RNA: ENST00000358871.6

TFEB-203, Transcript of transcription factor EB, humanhuman

TSL 1 (best) BASIC

Gene TFEB, Length 2,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFEB-203ENST00000358871 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
TFEB-203ENST00000358871 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
TFEB-203ENST00000358871 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
TFEB-203ENST00000358871 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
TFEB-203ENST00000358871 DCAF1Q9Y4B6 1507 aa32.17■■■□□ 2.74
TFEB-203ENST00000358871 SUPT5HO00267 1087 aaKnown RBP32.12■■■□□ 2.73
TFEB-203ENST00000358871 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
TFEB-203ENST00000358871 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
TFEB-203ENST00000358871 MYO15BQ96JP2 1530 aa31.3■■■□□ 2.6
TFEB-203ENST00000358871 ABCC9O60706 1549 aa31.13■■■□□ 2.57
TFEB-203ENST00000358871 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
TFEB-203ENST00000358871 NACADO15069 1562 aa30.78■■■□□ 2.52
TFEB-203ENST00000358871 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
TFEB-203ENST00000358871 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
TFEB-203ENST00000358871 HRCP23327 699 aa30.33■■■□□ 2.45
TFEB-203ENST00000358871 LOC105371045A0A1W2PR82 267 aa30.27■■■□□ 2.44
TFEB-203ENST00000358871 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
TFEB-203ENST00000358871 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.42
TFEB-203ENST00000358871 PCGF6Q9BYE7 350 aa30.19■■■□□ 2.42
TFEB-203ENST00000358871 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
TFEB-203ENST00000358871 WIZO95785 1651 aa30.03■■■□□ 2.4
TFEB-203ENST00000358871 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
TFEB-203ENST00000358871 TRIM26Q12899 539 aaPredicted RBP29.83■■■□□ 2.37
TFEB-203ENST00000358871 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
TFEB-203ENST00000358871 EIF4G1Q04637 1599 aaKnown RBP29.76■■■□□ 2.35
TFEB-203ENST00000358871 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
TFEB-203ENST00000358871 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
TFEB-203ENST00000358871 FAM9AQ8IZU1 332 aaPredicted RBP29.61■■■□□ 2.33
TFEB-203ENST00000358871 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
TFEB-203ENST00000358871 SMARCA2P51531 1590 aa29.48■■■□□ 2.31
TFEB-203ENST00000358871 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.3
TFEB-203ENST00000358871 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
TFEB-203ENST00000358871 ABCC8Q09428 1581 aa29.27■■■□□ 2.28
TFEB-203ENST00000358871 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
TFEB-203ENST00000358871 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
TFEB-203ENST00000358871 EHMT2Q96KQ7 1210 aa29.19■■■□□ 2.26
TFEB-203ENST00000358871 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
TFEB-203ENST00000358871 EEA1Q15075 1411 aa29.07■■■□□ 2.24
TFEB-203ENST00000358871 WRNQ14191 1432 aaPredicted RBP eCLIP28.97■■■□□ 2.23
TFEB-203ENST00000358871 SOGA1O94964 1423 aa28.96■■■□□ 2.23
TFEB-203ENST00000358871 TNIKQ9UKE5 1360 aa28.91■■■□□ 2.22
TFEB-203ENST00000358871 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
TFEB-203ENST00000358871 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
TFEB-203ENST00000358871 CSRNP3Q8WYN3 585 aa28.84■■■□□ 2.21
TFEB-203ENST00000358871 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
TFEB-203ENST00000358871 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
TFEB-203ENST00000358871 GOLGA3Q08378 1498 aa28.77■■■□□ 2.2
TFEB-203ENST00000358871 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
TFEB-203ENST00000358871 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
TFEB-203ENST00000358871 KIF21BO75037 1637 aa28.67■■■□□ 2.18
TFEB-203ENST00000358871 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
TFEB-203ENST00000358871 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
TFEB-203ENST00000358871 TOP2BQ02880 1626 aa28.5■■■□□ 2.15
TFEB-203ENST00000358871 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
TFEB-203ENST00000358871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.47■■■□□ 2.15
TFEB-203ENST00000358871 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.15
TFEB-203ENST00000358871 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
TFEB-203ENST00000358871 NCAPD3P42695 1498 aa28.42■■■□□ 2.14
TFEB-203ENST00000358871 SCAF1Q9H7N4 1312 aaKnown RBP28.37■■■□□ 2.13
TFEB-203ENST00000358871 CLIP1P30622 1438 aa28.36■■■□□ 2.13
TFEB-203ENST00000358871 RAPGEF2Q9Y4G8 1499 aa28.31■■■□□ 2.12
TFEB-203ENST00000358871 VPS8Q8N3P4 1428 aa28.29■■■□□ 2.12
TFEB-203ENST00000358871 TTBK1Q5TCY1 1321 aaPredicted RBP28.28■■■□□ 2.12
TFEB-203ENST00000358871 ERICH3Q5RHP9 1530 aa28.24■■■□□ 2.11
TFEB-203ENST00000358871 PRXQ9BXM0 1461 aa28.16■■■□□ 2.1
TFEB-203ENST00000358871 CFTRP13569 1480 aa28.15■■■□□ 2.1
TFEB-203ENST00000358871 CUX1P39880 1505 aa28.15■■■□□ 2.1
TFEB-203ENST00000358871 PRDM2Q13029 1718 aa28.1■■■□□ 2.09
TFEB-203ENST00000358871 APLP2Q06481 763 aa28.02■■■□□ 2.08
TFEB-203ENST00000358871 KIF27Q86VH2 1401 aa28.02■■■□□ 2.08
TFEB-203ENST00000358871 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
TFEB-203ENST00000358871 DIEXFQ68CQ4 756 aaKnown RBP27.89■■■□□ 2.05
TFEB-203ENST00000358871 ACIN1Q9UKV3 1341 aaKnown RBP27.88■■■□□ 2.05
TFEB-203ENST00000358871 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
TFEB-203ENST00000358871 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
TFEB-203ENST00000358871 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
TFEB-203ENST00000358871 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
TFEB-203ENST00000358871 NEUROD1Q13562 356 aa27.74■■■□□ 2.03
TFEB-203ENST00000358871 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
TFEB-203ENST00000358871 CUX2O14529 1486 aa27.7■■■□□ 2.02
TFEB-203ENST00000358871 IGF1RP08069 1367 aa27.67■■■□□ 2.02
TFEB-203ENST00000358871 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
TFEB-203ENST00000358871 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
TFEB-203ENST00000358871 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
TFEB-203ENST00000358871 CLSPNQ9HAW4 1339 aa27.63■■■□□ 2.01
TFEB-203ENST00000358871 CENPBP07199 599 aaPredicted RBP27.62■■■□□ 2.01
TFEB-203ENST00000358871 KANK4Q5T7N3 995 aaPredicted RBP27.62■■■□□ 2.01
TFEB-203ENST00000358871 MAP3K1Q13233 1512 aa27.55■■■□□ 2
TFEB-203ENST00000358871 CARMIL1Q5VZK9 1371 aa27.54■■■□□ 2
TFEB-203ENST00000358871 GTF3C3Q9Y5Q9 886 aa27.54■■■□□ 2
TFEB-203ENST00000358871 MYT1Q01538 1121 aa27.52■■■□□ 2
TFEB-203ENST00000358871 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
TFEB-203ENST00000358871 DHX57Q6P158 1386 aaKnown RBP27.5■■□□□ 1.99
TFEB-203ENST00000358871 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
TFEB-203ENST00000358871 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
TFEB-203ENST00000358871 TIAM1Q13009 1591 aa27.46■■□□□ 1.99
TFEB-203ENST00000358871 ABCA10Q8WWZ4 1543 aa27.4■■□□□ 1.98
TFEB-203ENST00000358871 FHAD1B1AJZ9 1412 aa27.36■■□□□ 1.97
TFEB-203ENST00000358871 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
TFEB-203ENST00000358871 CFAP43Q8NDM7 1665 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms