RNA–Protein interactions for RNA: ENST00000376279.7

PCCA-201, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-201ENST00000376279 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
PCCA-201ENST00000376279 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.15
PCCA-201ENST00000376279 ZCCHC6Q5VYS8 1495 aaKnown RBP34.26■■■■□ 3.08
PCCA-201ENST00000376279 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
PCCA-201ENST00000376279 DCAF8L2P0C7V8 631 aa33.64■■■□□ 2.98
PCCA-201ENST00000376279 SUPT5HO00267 1087 aaKnown RBP33.42■■■□□ 2.94
PCCA-201ENST00000376279 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
PCCA-201ENST00000376279 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
PCCA-201ENST00000376279 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
PCCA-201ENST00000376279 CHIC1Q5VXU3 224 aa32.37■■■□□ 2.77
PCCA-201ENST00000376279 ABCC9O60706 1549 aa32.36■■■□□ 2.77
PCCA-201ENST00000376279 NACADO15069 1562 aa32.17■■■□□ 2.74
PCCA-201ENST00000376279 RSF1Q96T23 1441 aaPredicted RBP31.97■■■□□ 2.71
PCCA-201ENST00000376279 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
PCCA-201ENST00000376279 CECR2Q9BXF3 1484 aa31.64■■■□□ 2.66
PCCA-201ENST00000376279 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
PCCA-201ENST00000376279 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
PCCA-201ENST00000376279 WIZO95785 1651 aa31.31■■■□□ 2.6
PCCA-201ENST00000376279 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.59
PCCA-201ENST00000376279 TRIM41Q8WV44 630 aa31.2■■■□□ 2.59
PCCA-201ENST00000376279 UNC13AQ9UPW8 1703 aa31.18■■■□□ 2.58
PCCA-201ENST00000376279 SMARCA4P51532 1647 aa30.97■■■□□ 2.55
PCCA-201ENST00000376279 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.55
PCCA-201ENST00000376279 FAM9AQ8IZU1 332 aaPredicted RBP30.87■■■□□ 2.53
PCCA-201ENST00000376279 TOP2AP11388 1531 aaKnown RBP30.86■■■□□ 2.53
PCCA-201ENST00000376279 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.53
PCCA-201ENST00000376279 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
PCCA-201ENST00000376279 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.51
PCCA-201ENST00000376279 HRCP23327 699 aa30.74■■■□□ 2.51
PCCA-201ENST00000376279 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
PCCA-201ENST00000376279 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
PCCA-201ENST00000376279 EHMT2Q96KQ7 1210 aa30.57■■■□□ 2.48
PCCA-201ENST00000376279 TRIM26Q12899 539 aaPredicted RBP30.51■■■□□ 2.47
PCCA-201ENST00000376279 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
PCCA-201ENST00000376279 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
PCCA-201ENST00000376279 ATAD2BQ9ULI0 1458 aa30.27■■■□□ 2.44
PCCA-201ENST00000376279 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
PCCA-201ENST00000376279 SOGA1O94964 1423 aa30.12■■■□□ 2.41
PCCA-201ENST00000376279 PPARGC1BQ86YN6 1023 aaKnown RBP30.11■■■□□ 2.41
PCCA-201ENST00000376279 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
PCCA-201ENST00000376279 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
PCCA-201ENST00000376279 EEA1Q15075 1411 aa29.97■■■□□ 2.39
PCCA-201ENST00000376279 CSRNP3Q8WYN3 585 aa29.94■■■□□ 2.38
PCCA-201ENST00000376279 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
PCCA-201ENST00000376279 TNIKQ9UKE5 1360 aa29.84■■■□□ 2.37
PCCA-201ENST00000376279 CEP162Q5TB80 1403 aa29.83■■■□□ 2.37
PCCA-201ENST00000376279 NCAPD3P42695 1498 aa29.76■■■□□ 2.36
PCCA-201ENST00000376279 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
PCCA-201ENST00000376279 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
PCCA-201ENST00000376279 GOLGA3Q08378 1498 aa29.72■■■□□ 2.35
PCCA-201ENST00000376279 ZEB1P37275 1124 aaPredicted RBP29.69■■■□□ 2.34
PCCA-201ENST00000376279 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
PCCA-201ENST00000376279 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
PCCA-201ENST00000376279 KIF21BO75037 1637 aa29.56■■■□□ 2.32
PCCA-201ENST00000376279 TTBK1Q5TCY1 1321 aaPredicted RBP29.5■■■□□ 2.31
PCCA-201ENST00000376279 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
PCCA-201ENST00000376279 CFTRP13569 1480 aa29.42■■■□□ 2.3
PCCA-201ENST00000376279 RAPGEF2Q9Y4G8 1499 aa29.41■■■□□ 2.3
PCCA-201ENST00000376279 CUX1P39880 1505 aa29.36■■■□□ 2.29
PCCA-201ENST00000376279 CLIP1P30622 1438 aa29.35■■■□□ 2.29
PCCA-201ENST00000376279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.32■■■□□ 2.28
PCCA-201ENST00000376279 CCER1Q8TC90 406 aaPredicted RBP29.23■■■□□ 2.27
PCCA-201ENST00000376279 RANGAP1P46060 587 aaPredicted RBP29.21■■■□□ 2.27
PCCA-201ENST00000376279 PRXQ9BXM0 1461 aa29.2■■■□□ 2.26
PCCA-201ENST00000376279 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
PCCA-201ENST00000376279 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
PCCA-201ENST00000376279 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
PCCA-201ENST00000376279 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
PCCA-201ENST00000376279 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
PCCA-201ENST00000376279 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
PCCA-201ENST00000376279 APLP2Q06481 763 aa29.03■■■□□ 2.24
PCCA-201ENST00000376279 ARAP1Q96P48 1450 aa28.93■■■□□ 2.22
PCCA-201ENST00000376279 CUX2O14529 1486 aa28.93■■■□□ 2.22
PCCA-201ENST00000376279 FGD5Q6ZNL6 1462 aa28.89■■■□□ 2.22
PCCA-201ENST00000376279 IGF1RP08069 1367 aa28.87■■■□□ 2.21
PCCA-201ENST00000376279 HNRNPUL2Q1KMD3 747 aaKnown RBP28.86■■■□□ 2.21
PCCA-201ENST00000376279 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
PCCA-201ENST00000376279 ARHGAP35Q9NRY4 1499 aa28.75■■■□□ 2.19
PCCA-201ENST00000376279 NESP48681 1621 aa28.74■■■□□ 2.19
PCCA-201ENST00000376279 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
PCCA-201ENST00000376279 KANK4Q5T7N3 995 aaPredicted RBP28.71■■■□□ 2.19
PCCA-201ENST00000376279 DNMBPQ6XZF7 1577 aa28.68■■■□□ 2.18
PCCA-201ENST00000376279 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
PCCA-201ENST00000376279 RAD54L2Q9Y4B4 1467 aa28.63■■■□□ 2.17
PCCA-201ENST00000376279 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
PCCA-201ENST00000376279 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
PCCA-201ENST00000376279 SCAF1Q9H7N4 1312 aaKnown RBP28.55■■■□□ 2.16
PCCA-201ENST00000376279 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
PCCA-201ENST00000376279 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
PCCA-201ENST00000376279 RRBP1Q9P2E9 1410 aaKnown RBP28.46■■■□□ 2.15
PCCA-201ENST00000376279 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
PCCA-201ENST00000376279 DIEXFQ68CQ4 756 aaKnown RBP28.44■■■□□ 2.14
PCCA-201ENST00000376279 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
PCCA-201ENST00000376279 P3H3Q8IVL6 736 aa28.37■■■□□ 2.13
PCCA-201ENST00000376279 TIAM1Q13009 1591 aa28.37■■■□□ 2.13
PCCA-201ENST00000376279 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
PCCA-201ENST00000376279 ZNF316A6NFI3 1004 aaPredicted RBP28.37■■■□□ 2.13
PCCA-201ENST00000376279 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
PCCA-201ENST00000376279 CUL7Q14999 1698 aa28.36■■■□□ 2.13
PCCA-201ENST00000376279 MAP3K1Q13233 1512 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms