RNA–Protein interactions for RNA: ENST00000278886.10

NINL-201, Transcript of ninein like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NINL, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-201ENST00000278886 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
NINL-201ENST00000278886 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.55
NINL-201ENST00000278886 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
NINL-201ENST00000278886 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
NINL-201ENST00000278886 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
NINL-201ENST00000278886 FAM9AQ8IZU1 332 aaPredicted RBP27.83■■■□□ 2.05
NINL-201ENST00000278886 APLP2Q06481 763 aa27.76■■■□□ 2.03
NINL-201ENST00000278886 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
NINL-201ENST00000278886 PCGF6Q9BYE7 350 aa27.35■■□□□ 1.97
NINL-201ENST00000278886 TTBK1Q5TCY1 1321 aaPredicted RBP27.32■■□□□ 1.96
NINL-201ENST00000278886 RANGAP1P46060 587 aaPredicted RBP27.18■■□□□ 1.94
NINL-201ENST00000278886 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
NINL-201ENST00000278886 ATP1B4Q9UN42 357 aaPredicted RBP26.87■■□□□ 1.89
NINL-201ENST00000278886 PELP1Q8IZL8 1130 aaKnown RBP26.84■■□□□ 1.89
NINL-201ENST00000278886 ZEB1P37275 1124 aaPredicted RBP26.81■■□□□ 1.88
NINL-201ENST00000278886 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
NINL-201ENST00000278886 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
NINL-201ENST00000278886 ABCC9O60706 1549 aa26.54■■□□□ 1.84
NINL-201ENST00000278886 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
NINL-201ENST00000278886 LOC105371045A0A1W2PR82 267 aa26.4■■□□□ 1.82
NINL-201ENST00000278886 TRIM26Q12899 539 aaPredicted RBP26.38■■□□□ 1.81
NINL-201ENST00000278886 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
NINL-201ENST00000278886 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.799e-7■■■■■ 29.6
NINL-201ENST00000278886 ITGAEP38570 1179 aa26.04■■□□□ 1.76
NINL-201ENST00000278886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
NINL-201ENST00000278886 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
NINL-201ENST00000278886 HRCP23327 699 aa25.98■■□□□ 1.75
NINL-201ENST00000278886 YTHDC1Q96MU7 727 aaKnown RBP25.89■■□□□ 1.74
NINL-201ENST00000278886 NEFLP07196 543 aa25.76■■□□□ 1.71
NINL-201ENST00000278886 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
NINL-201ENST00000278886 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
NINL-201ENST00000278886 ERICH6Q7L0X2 663 aa25.61■■□□□ 1.69
NINL-201ENST00000278886 POLR3GLQ9BT43 218 aa25.51■■□□□ 1.67
NINL-201ENST00000278886 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
NINL-201ENST00000278886 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
NINL-201ENST00000278886 FAM50AQ14320 339 aaKnown RBP25.48■■□□□ 1.67
NINL-201ENST00000278886 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.65
NINL-201ENST00000278886 TRIM52Q96A61 297 aa25.25■■□□□ 1.63
NINL-201ENST00000278886 FBLN2P98095 1184 aa25.25■■□□□ 1.63
NINL-201ENST00000278886 CNGB1Q14028 1251 aaPredicted RBP25.24■■□□□ 1.63
NINL-201ENST00000278886 DIEXFQ68CQ4 756 aaKnown RBP25.23■■□□□ 1.63
NINL-201ENST00000278886 NEUROD1Q13562 356 aa25.14■■□□□ 1.61
NINL-201ENST00000278886 P3H3Q8IVL6 736 aa25.13■■□□□ 1.61
NINL-201ENST00000278886 SLC4A1APQ9BWU0 796 aaKnown RBP24.98■■□□□ 1.59
NINL-201ENST00000278886 ARID3CA6NKF2 412 aa24.95■■□□□ 1.58
NINL-201ENST00000278886 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
NINL-201ENST00000278886 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
NINL-201ENST00000278886 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
NINL-201ENST00000278886 RSF1Q96T23 1441 aaPredicted RBP24.81■■□□□ 1.56
NINL-201ENST00000278886 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
NINL-201ENST00000278886 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
NINL-201ENST00000278886 NACADO15069 1562 aa24.78■■□□□ 1.56
NINL-201ENST00000278886 DAXXQ9UER7 740 aaPredicted RBP24.77■■□□□ 1.56
NINL-201ENST00000278886 ANP32CO43423 234 aa24.75■■□□□ 1.55
NINL-201ENST00000278886 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
NINL-201ENST00000278886 MYT1Q01538 1121 aa24.59■■□□□ 1.53
NINL-201ENST00000278886 CLIP1P30622 1438 aa24.5■■□□□ 1.51
NINL-201ENST00000278886 EEA1Q15075 1411 aa24.49■■□□□ 1.51
NINL-201ENST00000278886 BAZ1BQ9UIG0 1483 aaKnown RBP24.48■■□□□ 1.51
NINL-201ENST00000278886 GTF3C3Q9Y5Q9 886 aa24.48■■□□□ 1.51
NINL-201ENST00000278886 CLSPNQ9HAW4 1339 aa24.48■■□□□ 1.51
NINL-201ENST00000278886 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
NINL-201ENST00000278886 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
NINL-201ENST00000278886 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
NINL-201ENST00000278886 BCANQ96GW7 911 aa24.42■■□□□ 1.5
NINL-201ENST00000278886 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
NINL-201ENST00000278886 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
NINL-201ENST00000278886 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
NINL-201ENST00000278886 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
NINL-201ENST00000278886 CHIC2Q9UKJ5 165 aa24.37■■□□□ 1.49
NINL-201ENST00000278886 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
NINL-201ENST00000278886 CECR2Q9BXF3 1484 aa24.34■■□□□ 1.49
NINL-201ENST00000278886 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
NINL-201ENST00000278886 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
NINL-201ENST00000278886 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
NINL-201ENST00000278886 TSPY4P0CV99 314 aa24.24■■□□□ 1.47
NINL-201ENST00000278886 TSPY10P0CW01 314 aa24.24■■□□□ 1.47
NINL-201ENST00000278886 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
NINL-201ENST00000278886 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
NINL-201ENST00000278886 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
NINL-201ENST00000278886 DDX10Q13206 875 aaKnown RBP24.18■■□□□ 1.46
NINL-201ENST00000278886 NEFMP07197 916 aa24.17■■□□□ 1.46
NINL-201ENST00000278886 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
NINL-201ENST00000278886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.469e-8■■■□□ 16.4
NINL-201ENST00000278886 RTL5Q5HYW3 569 aaPredicted RBP24.16■■□□□ 1.46
NINL-201ENST00000278886 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
NINL-201ENST00000278886 STAG3Q9UJ98 1225 aa24.11■■□□□ 1.45
NINL-201ENST00000278886 ZBTB47Q9UFB7 747 aaPredicted RBP24.08■■□□□ 1.44
NINL-201ENST00000278886 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
NINL-201ENST00000278886 PLEKHD1A6NEE1 506 aa24.04■■□□□ 1.44
NINL-201ENST00000278886 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
NINL-201ENST00000278886 SLC24A1O60721 1099 aa24.01■■□□□ 1.43
NINL-201ENST00000278886 HNRNPUQ00839 825 aaKnown RBP eCLIP24.01■■□□□ 1.434e-6■■■□□ 16.7
NINL-201ENST00000278886 KDM2AQ9Y2K7 1162 aa23.99■■□□□ 1.43
NINL-201ENST00000278886 FAM9BQ8IZU0 186 aa23.97■■□□□ 1.43
NINL-201ENST00000278886 KCNH8Q96L42 1107 aa23.96■■□□□ 1.43
NINL-201ENST00000278886 SOGA1O94964 1423 aa23.92■■□□□ 1.42
NINL-201ENST00000278886 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
NINL-201ENST00000278886 CFDP1Q9UEE9 299 aaPredicted RBP23.89■■□□□ 1.41
NINL-201ENST00000278886 FKBP8Q14318 412 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms