RNA–Protein interactions for RNA: ENST00000621483.4

MFSD11-220, Transcript of major facilitator superfamily domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MFSD11, Length 2,850 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD11-220ENST00000621483 NISCHQ9Y2I1 1504 aa36.46■■■■□ 3.43
MFSD11-220ENST00000621483 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
MFSD11-220ENST00000621483 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
MFSD11-220ENST00000621483 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
MFSD11-220ENST00000621483 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
MFSD11-220ENST00000621483 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
MFSD11-220ENST00000621483 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
MFSD11-220ENST00000621483 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
MFSD11-220ENST00000621483 DCAF1Q9Y4B6 1507 aa29.74■■■□□ 2.35
MFSD11-220ENST00000621483 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
MFSD11-220ENST00000621483 LOC105371045A0A1W2PR82 267 aa29.28■■■□□ 2.28
MFSD11-220ENST00000621483 HRCP23327 699 aa29.24■■■□□ 2.27
MFSD11-220ENST00000621483 SCRIBQ14160 1630 aa29.13■■■□□ 2.25
MFSD11-220ENST00000621483 ABCC9O60706 1549 aa29.07■■■□□ 2.24
MFSD11-220ENST00000621483 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
MFSD11-220ENST00000621483 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
MFSD11-220ENST00000621483 TRIM41Q8WV44 630 aa28.8■■■□□ 2.2
MFSD11-220ENST00000621483 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
MFSD11-220ENST00000621483 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
MFSD11-220ENST00000621483 EHMT2Q96KQ7 1210 aa28.62■■■□□ 2.17
MFSD11-220ENST00000621483 TRIM26Q12899 539 aaPredicted RBP28.61■■■□□ 2.17
MFSD11-220ENST00000621483 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
MFSD11-220ENST00000621483 NACADO15069 1562 aa28.52■■■□□ 2.16
MFSD11-220ENST00000621483 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
MFSD11-220ENST00000621483 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
MFSD11-220ENST00000621483 WIZO95785 1651 aa28.24■■■□□ 2.11
MFSD11-220ENST00000621483 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
MFSD11-220ENST00000621483 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
MFSD11-220ENST00000621483 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
MFSD11-220ENST00000621483 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
MFSD11-220ENST00000621483 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
MFSD11-220ENST00000621483 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
MFSD11-220ENST00000621483 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
MFSD11-220ENST00000621483 SCAF1Q9H7N4 1312 aaKnown RBP27.71■■■□□ 2.03
MFSD11-220ENST00000621483 SMARCA4P51532 1647 aa27.71■■■□□ 2.03
MFSD11-220ENST00000621483 TTBK1Q5TCY1 1321 aaPredicted RBP27.69■■■□□ 2.02
MFSD11-220ENST00000621483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
MFSD11-220ENST00000621483 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
MFSD11-220ENST00000621483 SOGA1O94964 1423 aa27.55■■■□□ 2
MFSD11-220ENST00000621483 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
MFSD11-220ENST00000621483 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
MFSD11-220ENST00000621483 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
MFSD11-220ENST00000621483 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
MFSD11-220ENST00000621483 CEP162Q5TB80 1403 aa27.43■■□□□ 1.98
MFSD11-220ENST00000621483 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
MFSD11-220ENST00000621483 MYT1Q01538 1121 aa27.39■■□□□ 1.98
MFSD11-220ENST00000621483 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
MFSD11-220ENST00000621483 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
MFSD11-220ENST00000621483 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.961e-6■■■■■ 58.5
MFSD11-220ENST00000621483 EEA1Q15075 1411 aa27.24■■□□□ 1.95
MFSD11-220ENST00000621483 GOLGA3Q08378 1498 aa27.15■■□□□ 1.94
MFSD11-220ENST00000621483 RANGAP1P46060 587 aaPredicted RBP27.09■■□□□ 1.93
MFSD11-220ENST00000621483 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
MFSD11-220ENST00000621483 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
MFSD11-220ENST00000621483 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
MFSD11-220ENST00000621483 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
MFSD11-220ENST00000621483 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
MFSD11-220ENST00000621483 DIEXFQ68CQ4 756 aaKnown RBP26.97■■□□□ 1.91
MFSD11-220ENST00000621483 HNRNPUL2Q1KMD3 747 aaKnown RBP26.95■■□□□ 1.91
MFSD11-220ENST00000621483 CLIP1P30622 1438 aa26.92■■□□□ 1.9
MFSD11-220ENST00000621483 APLP2Q06481 763 aa26.87■■□□□ 1.89
MFSD11-220ENST00000621483 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
MFSD11-220ENST00000621483 RAPGEF2Q9Y4G8 1499 aa26.84■■□□□ 1.89
MFSD11-220ENST00000621483 NEUROD1Q13562 356 aa26.82■■□□□ 1.88
MFSD11-220ENST00000621483 KIF21BO75037 1637 aa26.8■■□□□ 1.88
MFSD11-220ENST00000621483 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
MFSD11-220ENST00000621483 GTF3C3Q9Y5Q9 886 aa26.71■■□□□ 1.87
MFSD11-220ENST00000621483 ZNF316A6NFI3 1004 aaPredicted RBP26.7■■□□□ 1.86
MFSD11-220ENST00000621483 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
MFSD11-220ENST00000621483 CENPBP07199 599 aaPredicted RBP26.61■■□□□ 1.85
MFSD11-220ENST00000621483 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
MFSD11-220ENST00000621483 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
MFSD11-220ENST00000621483 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
MFSD11-220ENST00000621483 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
MFSD11-220ENST00000621483 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
MFSD11-220ENST00000621483 CUX1P39880 1505 aa26.42■■□□□ 1.82
MFSD11-220ENST00000621483 KIF27Q86VH2 1401 aa26.4■■□□□ 1.82
MFSD11-220ENST00000621483 MIER1Q8N108 512 aa26.39■■□□□ 1.81
MFSD11-220ENST00000621483 ARAP1Q96P48 1450 aa26.38■■□□□ 1.81
MFSD11-220ENST00000621483 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
MFSD11-220ENST00000621483 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
MFSD11-220ENST00000621483 CFTRP13569 1480 aa26.31■■□□□ 1.8
MFSD11-220ENST00000621483 ITGAEP38570 1179 aa26.29■■□□□ 1.8
MFSD11-220ENST00000621483 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
MFSD11-220ENST00000621483 CUX2O14529 1486 aa26.17■■□□□ 1.78
MFSD11-220ENST00000621483 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
MFSD11-220ENST00000621483 IGF1RP08069 1367 aa26.12■■□□□ 1.77
MFSD11-220ENST00000621483 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
MFSD11-220ENST00000621483 CCNB3Q8WWL7 1395 aa26.1■■□□□ 1.77
MFSD11-220ENST00000621483 RRBP1Q9P2E9 1410 aaKnown RBP26.09■■□□□ 1.77
MFSD11-220ENST00000621483 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.76
MFSD11-220ENST00000621483 P3H3Q8IVL6 736 aa26.05■■□□□ 1.76
MFSD11-220ENST00000621483 ATP1B4Q9UN42 357 aaPredicted RBP26.05■■□□□ 1.76
MFSD11-220ENST00000621483 CARMIL1Q5VZK9 1371 aa26.04■■□□□ 1.76
MFSD11-220ENST00000621483 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
MFSD11-220ENST00000621483 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
MFSD11-220ENST00000621483 RAB3GAP2Q9H2M9 1393 aa25.89■■□□□ 1.74
MFSD11-220ENST00000621483 TIAM1Q13009 1591 aa25.83■■□□□ 1.73
MFSD11-220ENST00000621483 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.72
MFSD11-220ENST00000621483 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms