Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RPN3YER021W 1572 nt3.91□□□□□ -1.78
YLR040CQ07988 LIF1YGL090W 1266 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)CtQ(UUG)C 72 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)D1tQ(UUG)D1 72 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)D2tQ(UUG)D2 72 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)D3tQ(UUG)D3 72 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)E1tQ(UUG)E1 72 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)HtQ(UUG)H 72 nt3.91□□□□□ -1.78
YLR040CQ07988 tQ(UUG)LtQ(UUG)L 72 nt3.91□□□□□ -1.78
YLR040CQ07988 MAM33YIL070C 801 nt3.91□□□□□ -1.78
YLR040CQ07988 ABM1YJR108W 372 nt3.91□□□□□ -1.78
YLR040CQ07988 JHD2YJR119C 2187 nt3.91□□□□□ -1.78
YLR040CQ07988 MSL5YLR116W 1431 nt3.91□□□□□ -1.78
YLR040CQ07988 CGI121YML036W 546 nt3.91□□□□□ -1.78
YLR040CQ07988 ARG80YMR042W 534 nt3.91□□□□□ -1.78
YLR040CQ07988 YPK9YOR291W 4419 nt3.91□□□□□ -1.78
YLR040CQ07988 SYF1YDR416W 2580 nt3.91□□□□□ -1.78
YLR040CQ07988 TCO89YPL180W 2400 nt3.91□□□□□ -1.78
YLR040CQ07988 MTR10YOR160W 2919 nt3.91□□□□□ -1.78
YLR040CQ07988 CDC55YGL190C 1581 nt3.9□□□□□ -1.78
YLR040CQ07988 HMRA2YCR096C 360 nt3.9□□□□□ -1.79
YLR040CQ07988 YDL071CYDL071C 375 nt3.9□□□□□ -1.79
YLR040CQ07988 SMB1YER029C 591 nt3.9□□□□□ -1.79
YLR040CQ07988 SPI1YER150W 447 nt3.9□□□□□ -1.79
YLR040CQ07988 VMA10YHR039C-A 345 nt3.9□□□□□ -1.79
YLR040CQ07988 MAK16YAL025C 921 nt3.9□□□□□ -1.79
YLR040CQ07988 YKL118WYKL118W 312 nt3.9□□□□□ -1.79
YLR040CQ07988 YLR364C-AYLR364C-A 123 nt3.9□□□□□ -1.79
YLR040CQ07988 PDP3YLR455W 915 nt3.9□□□□□ -1.79
YLR040CQ07988 CTR86YCR054C 1692 nt3.9□□□□□ -1.79
YLR040CQ07988 SKG6YHR149C 2205 nt3.9□□□□□ -1.79
YLR040CQ07988 SEC2YNL272C 2280 nt3.9□□□□□ -1.79
YLR040CQ07988 LST4YKL176C 2487 nt3.89□□□□□ -1.79
YLR040CQ07988 STP1YDR463W 1560 nt3.89□□□□□ -1.79
YLR040CQ07988 SEC59YMR013C 1560 nt3.89□□□□□ -1.79
YLR040CQ07988 RNA14YMR061W 2034 nt3.89□□□□□ -1.79
YLR040CQ07988 YGL039WYGL039W 1047 nt3.89□□□□□ -1.79
YLR040CQ07988 YGL088WYGL088W 366 nt3.89□□□□□ -1.79
YLR040CQ07988 PBA1YLR199C 831 nt3.89□□□□□ -1.79
YLR040CQ07988 PDR17YNL264C 1053 nt3.89□□□□□ -1.79
YLR040CQ07988 YOR203WYOR203W 354 nt3.89□□□□□ -1.79
YLR040CQ07988 YPL107WYPL107W 747 nt3.89□□□□□ -1.79
YLR040CQ07988 SHG1YBR258C 429 nt3.89□□□□□ -1.79
YLR040CQ07988 RSC3YDR303C 2658 nt3.89□□□□□ -1.79
YLR040CQ07988 TFB2YPL122C 1542 nt3.89□□□□□ -1.79
YLR040CQ07988 SEN54YPL083C 1404 nt3.88□□□□□ -1.79
YLR040CQ07988 VPS27YNR006W 1869 nt3.88□□□□□ -1.79
YLR040CQ07988 RIA1YNL163C 3333 nt3.88□□□□□ -1.79
YLR040CQ07988 YDR149CYDR149C 708 nt3.88□□□□□ -1.79
YLR040CQ07988 SLD5YDR489W 885 nt3.88□□□□□ -1.79
YLR040CQ07988 SPO73YER046W 432 nt3.88□□□□□ -1.79
YLR040CQ07988 MTM1YGR257C 1101 nt3.88□□□□□ -1.79
YLR040CQ07988 VPS63YLR261C 327 nt3.88□□□□□ -1.79
YLR040CQ07988 NKP2YLR315W 462 nt3.88□□□□□ -1.79
YLR040CQ07988 BSC3YLR465C 309 nt3.88□□□□□ -1.79
YLR040CQ07988 SUI1YNL244C 327 nt3.88□□□□□ -1.79
YLR040CQ07988 RRN11YML043C 1524 nt3.88□□□□□ -1.79
YLR040CQ07988 SNF2YOR290C 5112 nt3.88□□□□□ -1.79
YLR040CQ07988 AEP1YMR064W 1557 nt3.88□□□□□ -1.79
YLR040CQ07988 SMP3YOR149C 1551 nt3.88□□□□□ -1.79
YLR040CQ07988 GYP6YJL044C 1377 nt3.88□□□□□ -1.79
YLR040CQ07988 DAL5YJR152W 1632 nt3.88□□□□□ -1.79
YLR040CQ07988 PHO87YCR037C 2772 nt3.87□□□□□ -1.79
YLR040CQ07988 snR8snR8 190 nt3.87□□□□□ -1.79
YLR040CQ07988 PMI40YER003C 1290 nt3.87□□□□□ -1.79
YLR040CQ07988 SLX8YER116C 825 nt3.87□□□□□ -1.79
YLR040CQ07988 RGI2YIL057C 495 nt3.87□□□□□ -1.79
YLR040CQ07988 UTP30YKR060W 825 nt3.87□□□□□ -1.79
YLR040CQ07988 YNL276CYNL276C 396 nt3.87□□□□□ -1.79
YLR040CQ07988 YOR022CYOR022C 2148 nt3.87□□□□□ -1.79
YLR040CQ07988 SEN1YLR430W 6696 nt3.87□□□□□ -1.79
YLR040CQ07988 STE24YJR117W 1362 nt3.87□□□□□ -1.79
YLR040CQ07988 BUD6YLR319C 2367 nt3.87□□□□□ -1.79
YLR040CQ07988 SSH1YBR283C 1473 nt3.86□□□□□ -1.79
YLR040CQ07988 MIS1YBR084W 2928 nt3.86□□□□□ -1.79
YLR040CQ07988 PGS1YCL004W 1566 nt3.86□□□□□ -1.79
YLR040CQ07988 ERV1YGR029W 570 nt3.86□□□□□ -1.79
YLR040CQ07988 CFD1YIL003W 882 nt3.86□□□□□ -1.79
YLR040CQ07988 YJR079WYJR079W 330 nt3.86□□□□□ -1.79
YLR040CQ07988 YOL134CYOL134C 390 nt3.86□□□□□ -1.79
YLR040CQ07988 DPH6YLR143W 2058 nt3.86□□□□□ -1.79
YLR040CQ07988 BRE4YDL231C 3378 nt3.86□□□□□ -1.79
YLR040CQ07988 DIT2YDR402C 1470 nt3.86□□□□□ -1.79
YLR040CQ07988 NHX1YDR456W 1902 nt3.85□□□□□ -1.79
YLR040CQ07988 TPA1YER049W 1935 nt3.85□□□□□ -1.79
YLR040CQ07988 AIM14YGL160W 1713 nt3.85□□□□□ -1.79
YLR040CQ07988 YOL153CYOL153C 1746 nt3.85□□□□□ -1.79
YLR040CQ07988 YCR018C-AYCR018C-A 255 nt3.85□□□□□ -1.79
YLR040CQ07988 FMN1YDR236C 657 nt3.85□□□□□ -1.79
YLR040CQ07988 RPB3YIL021W 957 nt3.85□□□□□ -1.79
YLR040CQ07988 YKL069WYKL069W 543 nt3.85□□□□□ -1.79
YLR040CQ07988 RDN5-1RDN5-1 121 nt3.85□□□□□ -1.79
YLR040CQ07988 RDN5-6RDN5-6 121 nt3.85□□□□□ -1.79
YLR040CQ07988 ERG2YMR202W 669 nt3.85□□□□□ -1.79
YLR040CQ07988 YOR331CYOR331C 558 nt3.85□□□□□ -1.79
YLR040CQ07988 ACK1YDL203C 1872 nt3.85□□□□□ -1.79
YLR040CQ07988 FAS2YPL231W 5664 nt3.85□□□□□ -1.79
YLR040CQ07988 RAD54YGL163C 2697 nt3.85□□□□□ -1.79
YLR040CQ07988 PEX4YGR133W 552 nt3.84□□□□□ -1.79
YLR040CQ07988 CRG1YHR209W 876 nt3.84□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms