RNA–Protein interactions for RNA: YCL004W

PGS1, Transcript of Phosphatidylglycerolphosphate synthase, yeastyeast

Gene PGS1, Length 1,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGS1YCL004W FAP1P53971 965 aa12.71□□□□□ -0.37
PGS1YCL004W MTC1P47018 478 aaKnown RBP12.58□□□□□ -0.4
PGS1YCL004W PRY3P47033 881 aa12.05□□□□□ -0.48
PGS1YCL004W DRS1P32892 752 aaKnown RBP11.35□□□□□ -0.59
PGS1YCL004W YCK3P39962 524 aa11.35□□□□□ -0.59
PGS1YCL004W HAA1Q12753 694 aaKnown RBP11.18□□□□□ -0.62
PGS1YCL004W AAD16Q02895 342 aa11.01□□□□□ -0.65
PGS1YCL004W PRI1P10363 409 aa10.95□□□□□ -0.66
PGS1YCL004W ISW2Q08773 1120 aa10.53□□□□□ -0.72
PGS1YCL004W RPG1P38249 964 aaKnown RBP10.39□□□□□ -0.75
PGS1YCL004W TSR3Q12094 313 aaKnown RBP10.24□□□□□ -0.77
PGS1YCL004W BUD31P25337 157 aaPredicted RBP10.13□□□□□ -0.79
PGS1YCL004W DIP2Q12220 943 aaPredicted RBP10.09□□□□□ -0.79
PGS1YCL004W YGL015CP33199 130 aa9.92□□□□□ -0.82
PGS1YCL004W MRPL32P25348 183 aa9.91□□□□□ -0.82
PGS1YCL004W RSE1Q04693 1361 aaKnown RBP9.88□□□□□ -0.83
PGS1YCL004W AVT3P36062 692 aa9.64□□□□□ -0.87
PGS1YCL004W RPL17AP05740 184 aaKnown RBP9.56□□□□□ -0.88
PGS1YCL004W REB1P21538 810 aa9.56□□□□□ -0.88
PGS1YCL004W RPL17BP46990 184 aaKnown RBP9.56□□□□□ -0.88
PGS1YCL004W SIS1P25294 352 aaKnown RBP9.41□□□□□ -0.9
PGS1YCL004W BFR2Q06631 534 aaKnown RBP9.28□□□□□ -0.92
PGS1YCL004W CDC27P38042 758 aa9.24□□□□□ -0.93
PGS1YCL004W UBP10P53874 792 aaPredicted RBP9.19□□□□□ -0.94
PGS1YCL004W SPT21P35209 758 aa9.15□□□□□ -0.95
PGS1YCL004W YKR023WP36119 530 aaKnown RBP9.12□□□□□ -0.95
PGS1YCL004W MAP2P38174 421 aaKnown RBP9.04□□□□□ -0.96
PGS1YCL004W TFC8Q12308 588 aa8.94□□□□□ -0.98
PGS1YCL004W UBP9P39967 754 aa8.93□□□□□ -0.98
PGS1YCL004W HOP09932 586 aa8.9□□□□□ -0.99
PGS1YCL004W DCD1P06773 312 aa8.84□□□□□ -0.99
PGS1YCL004W TIF4632P39936 914 aaKnown RBP8.79□□□□□ -1
PGS1YCL004W TGL3P40308 642 aa8.77□□□□□ -1.01
PGS1YCL004W RIM101P33400 625 aa8.76□□□□□ -1.01
PGS1YCL004W SCY1P53009 804 aa8.73□□□□□ -1.01
PGS1YCL004W SLX5P32828 619 aaKnown RBP8.7□□□□□ -1.02
PGS1YCL004W BCH2P36122 765 aa8.61□□□□□ -1.03
PGS1YCL004W OXP1P28273 1286 aa8.42□□□□□ -1.06
PGS1YCL004W EPS1P40557 701 aa8.39□□□□□ -1.07
PGS1YCL004W BDF1P35817 686 aa8.35□□□□□ -1.07
PGS1YCL004W MST1P07236 462 aa8.34□□□□□ -1.07
PGS1YCL004W YIL055CP40523 627 aaKnown RBP8.31□□□□□ -1.08
PGS1YCL004W PTP3P40048 928 aa8.31□□□□□ -1.08
PGS1YCL004W YOR238WQ08634 303 aa8.23□□□□□ -1.09
PGS1YCL004W NSR1P27476 414 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
PGS1YCL004W YBL029C-AQ3E756 94 aa8.22□□□□□ -1.09
PGS1YCL004W BBC1P47068 1157 aa8.2□□□□□ -1.1
PGS1YCL004W RSM7P47150 247 aa8.2□□□□□ -1.1
PGS1YCL004W VNX1P42839 908 aa8.15□□□□□ -1.1
PGS1YCL004W AI2P03876 854 aa8.14□□□□□ -1.11
PGS1YCL004W YAP5P40574 245 aa8.1□□□□□ -1.11
PGS1YCL004W YAH1Q12184 172 aaKnown RBP8.1□□□□□ -1.11
PGS1YCL004W TFA1P36100 482 aa8.09□□□□□ -1.11
PGS1YCL004W SPP1Q03012 353 aa8.06□□□□□ -1.12
PGS1YCL004W AIR2Q12476 344 aaKnown RBP7.99□□□□□ -1.13
PGS1YCL004W FKH1P40466 484 aa7.98□□□□□ -1.13
PGS1YCL004W YJL171CP46992 396 aa7.98□□□□□ -1.13
PGS1YCL004W YLR271WQ06152 274 aa7.97□□□□□ -1.13
PGS1YCL004W TIF11P38912 153 aaKnown RBP7.97□□□□□ -1.13
PGS1YCL004W WSC3Q12215 556 aa7.96□□□□□ -1.14
PGS1YCL004W GTT3P39996 337 aa7.92□□□□□ -1.14
PGS1YCL004W PSD2P53037 1138 aaKnown RBP7.92□□□□□ -1.14
PGS1YCL004W RGA2Q06407 1009 aa7.86□□□□□ -1.15
PGS1YCL004W MRM1P25270 412 aa7.82□□□□□ -1.16
PGS1YCL004W LDB19Q12502 818 aa7.82□□□□□ -1.16
PGS1YCL004W SSP1P38871 571 aa7.81□□□□□ -1.16
PGS1YCL004W IOC2Q12072 812 aa7.81□□□□□ -1.16
PGS1YCL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
PGS1YCL004W ULI1P43604 169 aa7.8□□□□□ -1.16
PGS1YCL004W BMT6Q12291 365 aa7.8□□□□□ -1.16
PGS1YCL004W PIB1Q06651 286 aa7.78□□□□□ -1.16
PGS1YCL004W MSB4Q12317 492 aa7.76□□□□□ -1.17
PGS1YCL004W EAP1P36041 632 aaKnown RBP7.71□□□□□ -1.17
PGS1YCL004W YMR1P47147 688 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
PGS1YCL004W VPS29P38759 282 aa7.67□□□□□ -1.18
PGS1YCL004W RTG3P38165 486 aa7.67□□□□□ -1.18
PGS1YCL004W MGA2P40578 1113 aa7.67□□□□□ -1.18
PGS1YCL004W YOL036WQ08206 761 aa7.67□□□□□ -1.18
PGS1YCL004W CST9Q06032 482 aa7.66□□□□□ -1.18
PGS1YCL004W DBP1P24784 617 aaKnown RBP7.65□□□□□ -1.18
PGS1YCL004W SET4P42948 560 aa7.63□□□□□ -1.19
PGS1YCL004W RTG1P32607 177 aa7.62□□□□□ -1.19
PGS1YCL004W TRP5P00931 707 aaKnown RBP7.61□□□□□ -1.19
PGS1YCL004W VMA1P17255 1071 aaKnown RBP7.6□□□□□ -1.19
PGS1YCL004W SAM3Q08986 587 aa7.6□□□□□ -1.19
PGS1YCL004W NCR1Q12200 1170 aa7.59□□□□□ -1.19
PGS1YCL004W SEC61P32915 480 aa7.59□□□□□ -1.2
PGS1YCL004W STS1P38637 319 aa7.59□□□□□ -1.2
PGS1YCL004W YFR006WP43590 535 aa7.59□□□□□ -1.2
PGS1YCL004W YNL035CP53962 389 aaKnown RBP7.58□□□□□ -1.2
PGS1YCL004W ABP1P15891 592 aaKnown RBP7.51□□□□□ -1.21
PGS1YCL004W RCR1P38212 213 aa7.5□□□□□ -1.21
PGS1YCL004W JIP4Q03361 876 aa7.47□□□□□ -1.21
PGS1YCL004W TFG1P41895 735 aaPredicted RBP7.46□□□□□ -1.21
PGS1YCL004W DAN4P47179 1161 aa7.45□□□□□ -1.22
PGS1YCL004W GYP5Q12344 894 aa7.45□□□□□ -1.22
PGS1YCL004W BCK2P33306 851 aa7.42□□□□□ -1.22
PGS1YCL004W HTA1P04911 132 aaKnown RBP7.42□□□□□ -1.22
PGS1YCL004W HTA2P04912 132 aa7.42□□□□□ -1.22
PGS1YCL004W CHL1P22516 861 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms