RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF2YOR290C TFA1P36100 482 aa6.12□□□□□ -1.43
SNF2YOR290C RQC2Q12532 1038 aaKnown RBP6.06□□□□□ -1.44
SNF2YOR290C TY1B-DR4Q07793 1604 aa6.04□□□□□ -1.44
SNF2YOR290C MNN4P36044 1178 aa5.9□□□□□ -1.47
SNF2YOR290C AIM44Q99299 758 aa5.85□□□□□ -1.47
SNF2YOR290C DRS1P32892 752 aaKnown RBP5.82□□□□□ -1.48
SNF2YOR290C TAF7Q05021 590 aa5.8□□□□□ -1.48
SNF2YOR290C ASF1P32447 279 aa5.69□□□□□ -1.5
SNF2YOR290C BFR2Q06631 534 aaKnown RBP5.67□□□□□ -1.5
SNF2YOR290C TY1B-DR3Q99231 1755 aa5.63□□□□□ -1.51
SNF2YOR290C SPA2P23201 1466 aaKnown RBP5.63□□□□□ -1.51
SNF2YOR290C MON2P48563 1636 aaPredicted RBP5.62□□□□□ -1.51
SNF2YOR290C TY2B-LR1P0C2J3 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-FP0CX63 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-GR2P0CX64 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-CP25384 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-DR2Q03494 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY1B-DR1Q03855 1755 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-DR3Q07791 1770 aaKnown RBP5.6□□□□□ -1.51
SNF2YOR290C TY2B-OR1Q12113 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-DR1Q12472 1770 aa5.6□□□□□ -1.51
SNF2YOR290C TY2B-OR2Q12501 1770 aa5.6□□□□□ -1.51
SNF2YOR290C MTC1P47018 478 aaKnown RBP5.6□□□□□ -1.51
SNF2YOR290C SGS1P35187 1447 aa5.57□□□□□ -1.52
SNF2YOR290C SSN2P38931 1420 aa5.57□□□□□ -1.52
SNF2YOR290C HSL1P34244 1518 aa5.57□□□□□ -1.52
SNF2YOR290C TY2B-BQ12491 1770 aa5.55□□□□□ -1.52
SNF2YOR290C HIR3P47171 1648 aa5.49□□□□□ -1.53
SNF2YOR290C FPR3P38911 411 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-HO13535 1793 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-DR5P0C2I2 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-DR6P0C2I3 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-LR2P0C2I5 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-LR3P0C2I6 1755 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-PR1P0C2I9 1755 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-PR2P0C2J0 1756 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-PR3P0C2J1 1755 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-JR1P47098 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-ML2Q03434 1755 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-ER1Q03612 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-ML1Q04711 1755 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-BRQ12193 1756 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-GR2Q12269 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-OLQ12273 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-GR3Q12316 1755 aa5.49□□□□□ -1.53
SNF2YOR290C TY1B-PLQ12414 1755 aaKnown RBP5.49□□□□□ -1.53
SNF2YOR290C TY1B-ORQ92393 1755 aa5.49□□□□□ -1.53
SNF2YOR290C SWR1Q05471 1514 aa5.44□□□□□ -1.54
SNF2YOR290C ATG2P53855 1592 aa5.44□□□□□ -1.54
SNF2YOR290C SIS2P36024 562 aa5.42□□□□□ -1.54
SNF2YOR290C FPR4Q06205 392 aaPredicted RBP5.42□□□□□ -1.54
SNF2YOR290C PEP1P32319 1579 aa5.41□□□□□ -1.54
SNF2YOR290C SIN3P22579 1536 aa5.41□□□□□ -1.54
SNF2YOR290C ESP1Q03018 1630 aa5.41□□□□□ -1.54
SNF2YOR290C INO80P53115 1489 aa5.4□□□□□ -1.54
SNF2YOR290C SSK2P53599 1579 aa5.4□□□□□ -1.54
SNF2YOR290C YRB30P53107 440 aaPredicted RBP5.39□□□□□ -1.55
SNF2YOR290C POL5P39985 1022 aaKnown RBP5.38□□□□□ -1.55
SNF2YOR290C TY1B-JR2P47100 1755 aaKnown RBP5.37□□□□□ -1.55
SNF2YOR290C TY1B-ER2Q03619 1755 aa5.37□□□□□ -1.55
SNF2YOR290C TY1B-MR1Q04214 1755 aa5.37□□□□□ -1.55
SNF2YOR290C TY1B-MR2Q04670 1755 aaKnown RBP5.37□□□□□ -1.55
SNF2YOR290C TY1B-LR1Q12088 1755 aaKnown RBP5.37□□□□□ -1.55
SNF2YOR290C TY1B-NL1Q12112 1755 aa5.37□□□□□ -1.55
SNF2YOR290C TY1B-GR1Q12141 1755 aa5.37□□□□□ -1.55
SNF2YOR290C TY1B-BLQ12490 1755 aa5.37□□□□□ -1.55
SNF2YOR290C NOP2P40991 618 aaKnown RBP5.37□□□□□ -1.55
SNF2YOR290C FUN12P39730 1002 aaKnown RBP5.35□□□□□ -1.55
SNF2YOR290C TCB3Q03640 1545 aaKnown RBP5.34□□□□□ -1.55
SNF2YOR290C RNA1P11745 407 aaKnown RBP5.33□□□□□ -1.56
SNF2YOR290C NAB3P38996 802 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SNF2YOR290C URN1Q06525 465 aaKnown RBP5.29□□□□□ -1.56
SNF2YOR290C LEO1P38439 464 aa5.28□□□□□ -1.56
SNF2YOR290C SCT1P32784 759 aa5.27□□□□□ -1.57
SNF2YOR290C IFH1P39520 1085 aa5.25□□□□□ -1.57
SNF2YOR290C JIP3O13555 125 aa5.25□□□□□ -1.57
SNF2YOR290C REV3P14284 1504 aa5.25□□□□□ -1.57
SNF2YOR290C SPT6P23615 1451 aaKnown RBP5.24□□□□□ -1.57
SNF2YOR290C NUP170P38181 1502 aa5.24□□□□□ -1.57
SNF2YOR290C TOM1Q03280 3268 aa5.23□□□□□ -1.57
SNF2YOR290C TY3B-GQ99315 1547 aa5.21□□□□□ -1.57
SNF2YOR290C THO2P53552 1597 aaKnown RBP5.21□□□□□ -1.57
SNF2YOR290C MLP2P40457 1679 aa5.21□□□□□ -1.57
SNF2YOR290C SAS10Q12136 610 aaPredicted RBP5.2□□□□□ -1.58
SNF2YOR290C ULS1Q08562 1619 aa5.2□□□□□ -1.58
SNF2YOR290C NOP7P53261 605 aaKnown RBP5.2□□□□□ -1.58
SNF2YOR290C EAF7P53911 425 aaKnown RBP5.19□□□□□ -1.58
SNF2YOR290C YBT1P32386 1661 aa5.19□□□□□ -1.58
SNF2YOR290C NAP1P25293 417 aaKnown RBP5.19□□□□□ -1.58
SNF2YOR290C ESC1Q03661 1658 aaKnown RBP5.17□□□□□ -1.58
SNF2YOR290C COG8Q04632 607 aa5.16□□□□□ -1.58
SNF2YOR290C HSP82P02829 709 aaKnown RBP5.15□□□□□ -1.58
SNF2YOR290C XRN1P22147 1528 aaKnown RBP5.15□□□□□ -1.59
SNF2YOR290C BPT1P14772 1559 aa5.15□□□□□ -1.59
SNF2YOR290C YRF1-1P0CX20 1796 aa5.14□□□□□ -1.59
SNF2YOR290C YRF1-5P0CX21 1796 aa5.14□□□□□ -1.59
SNF2YOR290C YRF1-8P0CX22 1796 aa5.14□□□□□ -1.59
SNF2YOR290C KRI1P42846 591 aaKnown RBP5.14□□□□□ -1.59
SNF2YOR290C SVF1Q05515 481 aa5.14□□□□□ -1.59
SNF2YOR290C QCR6P00127 147 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 126 ms