RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeastyeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC59YMR013C MTC1P47018 478 aaKnown RBP10.92□□□□□ -0.66
SEC59YMR013C DRS1P32892 752 aaKnown RBP10.23□□□□□ -0.77
SEC59YMR013C FAP1P53971 965 aa9.89□□□□□ -0.83
SEC59YMR013C PRY3P47033 881 aa9.33□□□□□ -0.92
SEC59YMR013C PRI1P10363 409 aa9.19□□□□□ -0.94
SEC59YMR013C AAD16Q02895 342 aa9.15□□□□□ -0.95
SEC59YMR013C ISW2Q08773 1120 aa9.06□□□□□ -0.96
SEC59YMR013C RPG1P38249 964 aaKnown RBP8.97□□□□□ -0.97
SEC59YMR013C DIP2Q12220 943 aaPredicted RBP8.95□□□□□ -0.98
SEC59YMR013C YCK3P39962 524 aa8.81□□□□□ -1
SEC59YMR013C BFR2Q06631 534 aaKnown RBP8.79□□□□□ -1
SEC59YMR013C TSR3Q12094 313 aaKnown RBP8.72□□□□□ -1.01
SEC59YMR013C HAA1Q12753 694 aaKnown RBP8.68□□□□□ -1.02
SEC59YMR013C RSE1Q04693 1361 aaKnown RBP8.66□□□□□ -1.02
SEC59YMR013C TFA1P36100 482 aa8.63□□□□□ -1.03
SEC59YMR013C AVT3P36062 692 aa8.62□□□□□ -1.03
SEC59YMR013C RPL17AP05740 184 aaKnown RBP8.4□□□□□ -1.06
SEC59YMR013C RPL17BP46990 184 aaKnown RBP8.4□□□□□ -1.06
SEC59YMR013C REB1P21538 810 aa8.37□□□□□ -1.07
SEC59YMR013C MRPL32P25348 183 aa8.37□□□□□ -1.07
SEC59YMR013C BUD31P25337 157 aaPredicted RBP8.15□□□□□ -1.1
SEC59YMR013C YGL015CP33199 130 aa8.01□□□□□ -1.13
SEC59YMR013C SPT21P35209 758 aa8.01□□□□□ -1.13
SEC59YMR013C CDC27P38042 758 aa7.95□□□□□ -1.14
SEC59YMR013C YKR023WP36119 530 aaKnown RBP7.92□□□□□ -1.14
SEC59YMR013C RQC2Q12532 1038 aaKnown RBP7.87□□□□□ -1.15
SEC59YMR013C HOP09932 586 aa7.78□□□□□ -1.16
SEC59YMR013C TFC8Q12308 588 aa7.76□□□□□ -1.17
SEC59YMR013C DCD1P06773 312 aa7.75□□□□□ -1.17
SEC59YMR013C RIM101P33400 625 aa7.73□□□□□ -1.17
SEC59YMR013C MAP2P38174 421 aaKnown RBP7.71□□□□□ -1.18
SEC59YMR013C UBP10P53874 792 aaPredicted RBP7.71□□□□□ -1.18
SEC59YMR013C SCY1P53009 804 aa7.56□□□□□ -1.2
SEC59YMR013C BCH2P36122 765 aa7.5□□□□□ -1.21
SEC59YMR013C OXP1P28273 1286 aa7.47□□□□□ -1.21
SEC59YMR013C SIS1P25294 352 aaKnown RBP7.46□□□□□ -1.21
SEC59YMR013C SLX5P32828 619 aaKnown RBP7.46□□□□□ -1.22
SEC59YMR013C TIF4632P39936 914 aaKnown RBP7.4□□□□□ -1.22
SEC59YMR013C PTP3P40048 928 aa7.38□□□□□ -1.23
SEC59YMR013C YIL055CP40523 627 aaKnown RBP7.38□□□□□ -1.23
SEC59YMR013C TGL3P40308 642 aa7.35□□□□□ -1.23
SEC59YMR013C DMA1P38823 416 aa7.34□□□□□ -1.23
SEC59YMR013C EPS1P40557 701 aa7.33□□□□□ -1.24
SEC59YMR013C YAH1Q12184 172 aaKnown RBP7.3□□□□□ -1.24
SEC59YMR013C BDF1P35817 686 aa7.29□□□□□ -1.24
SEC59YMR013C RSM7P47150 247 aa7.27□□□□□ -1.25
SEC59YMR013C BBC1P47068 1157 aa7.2□□□□□ -1.26
SEC59YMR013C AI2P03876 854 aa7.2□□□□□ -1.26
SEC59YMR013C TAF7Q05021 590 aa7.16□□□□□ -1.26
SEC59YMR013C UBP9P39967 754 aa7.14□□□□□ -1.27
SEC59YMR013C YLR271WQ06152 274 aa7.13□□□□□ -1.27
SEC59YMR013C SSP1P38871 571 aa7.06□□□□□ -1.28
SEC59YMR013C YOR238WQ08634 303 aa7.04□□□□□ -1.28
SEC59YMR013C MST1P07236 462 aa7.02□□□□□ -1.29
SEC59YMR013C NSR1P27476 414 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
SEC59YMR013C PSD2P53037 1138 aaKnown RBP7.02□□□□□ -1.29
SEC59YMR013C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
SEC59YMR013C YAP5P40574 245 aa6.99□□□□□ -1.29
SEC59YMR013C MRM1P25270 412 aa6.95□□□□□ -1.3
SEC59YMR013C YBL029C-AQ3E756 94 aa6.95□□□□□ -1.3
SEC59YMR013C LEO1P38439 464 aa6.93□□□□□ -1.3
SEC59YMR013C CST9Q06032 482 aa6.9□□□□□ -1.31
SEC59YMR013C MGA2P40578 1113 aa6.88□□□□□ -1.31
SEC59YMR013C WSC3Q12215 556 aa6.88□□□□□ -1.31
SEC59YMR013C GTT3P39996 337 aa6.87□□□□□ -1.31
SEC59YMR013C VNX1P42839 908 aa6.87□□□□□ -1.31
SEC59YMR013C PIB1Q06651 286 aa6.86□□□□□ -1.31
SEC59YMR013C SPP1Q03012 353 aa6.82□□□□□ -1.32
SEC59YMR013C RTG3P38165 486 aa6.78□□□□□ -1.32
SEC59YMR013C VPS29P38759 282 aa6.78□□□□□ -1.32
SEC59YMR013C YMR1P47147 688 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
SEC59YMR013C TIF11P38912 153 aaKnown RBP6.76□□□□□ -1.33
SEC59YMR013C DBP1P24784 617 aaKnown RBP6.74□□□□□ -1.33
SEC59YMR013C YFR006WP43590 535 aa6.74□□□□□ -1.33
SEC59YMR013C SAS10Q12136 610 aaPredicted RBP6.74□□□□□ -1.33
SEC59YMR013C LEU3P08638 886 aa6.73□□□□□ -1.33
SEC59YMR013C RCR1P38212 213 aa6.73□□□□□ -1.33
SEC59YMR013C STS1P38637 319 aa6.7□□□□□ -1.34
SEC59YMR013C ULI1P43604 169 aa6.69□□□□□ -1.34
SEC59YMR013C YOL036WQ08206 761 aa6.67□□□□□ -1.34
SEC59YMR013C SET4P42948 560 aa6.66□□□□□ -1.34
SEC59YMR013C MSB4Q12317 492 aa6.66□□□□□ -1.34
SEC59YMR013C VMA1P17255 1071 aaKnown RBP6.65□□□□□ -1.34
SEC59YMR013C LDB19Q12502 818 aa6.65□□□□□ -1.34
SEC59YMR013C FKH1P40466 484 aa6.65□□□□□ -1.35
SEC59YMR013C IOC2Q12072 812 aa6.65□□□□□ -1.35
SEC59YMR013C RGA2Q06407 1009 aa6.64□□□□□ -1.35
SEC59YMR013C EAP1P36041 632 aaKnown RBP6.63□□□□□ -1.35
SEC59YMR013C AIR2Q12476 344 aaKnown RBP6.63□□□□□ -1.35
SEC59YMR013C SAM3Q08986 587 aa6.61□□□□□ -1.35
SEC59YMR013C YJL171CP46992 396 aa6.6□□□□□ -1.35
SEC59YMR013C TRP5P00931 707 aaKnown RBP6.59□□□□□ -1.35
SEC59YMR013C RTG1P32607 177 aa6.55□□□□□ -1.36
SEC59YMR013C RAM2P29703 316 aa6.53□□□□□ -1.36
SEC59YMR013C GYP5Q12344 894 aa6.53□□□□□ -1.36
SEC59YMR013C YNL035CP53962 389 aaKnown RBP6.52□□□□□ -1.37
SEC59YMR013C BMT6Q12291 365 aa6.52□□□□□ -1.37
SEC59YMR013C MAK11P20484 414 aaKnown RBP6.5□□□□□ -1.37
SEC59YMR013C DCW1P36091 449 aa6.5□□□□□ -1.37
SEC59YMR013C RPN1P38764 993 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms