RNA–Protein interactions for RNA: YLR116W

MSL5, Transcript of Component of commitment complex, yeastyeast

Gene MSL5, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL5YLR116W MTC1P47018 478 aaKnown RBP12.37□□□□□ -0.43
MSL5YLR116W DRS1P32892 752 aaKnown RBP11.38□□□□□ -0.59
MSL5YLR116W FAP1P53971 965 aa11.37□□□□□ -0.59
MSL5YLR116W PRY3P47033 881 aa10.67□□□□□ -0.7
MSL5YLR116W PRI1P10363 409 aa10.52□□□□□ -0.73
MSL5YLR116W AAD16Q02895 342 aa10.5□□□□□ -0.73
MSL5YLR116W ISW2Q08773 1120 aa10.34□□□□□ -0.75
MSL5YLR116W RPG1P38249 964 aaKnown RBP10.18□□□□□ -0.78
MSL5YLR116W DIP2Q12220 943 aaPredicted RBP10.04□□□□□ -0.8
MSL5YLR116W HAA1Q12753 694 aaKnown RBP10.03□□□□□ -0.8
MSL5YLR116W YCK3P39962 524 aa9.95□□□□□ -0.82
MSL5YLR116W TSR3Q12094 313 aaKnown RBP9.91□□□□□ -0.82
MSL5YLR116W RSE1Q04693 1361 aaKnown RBP9.77□□□□□ -0.84
MSL5YLR116W AVT3P36062 692 aa9.6□□□□□ -0.87
MSL5YLR116W MRPL32P25348 183 aa9.59□□□□□ -0.87
MSL5YLR116W REB1P21538 810 aa9.48□□□□□ -0.89
MSL5YLR116W RPL17AP05740 184 aaKnown RBP9.46□□□□□ -0.9
MSL5YLR116W RPL17BP46990 184 aaKnown RBP9.46□□□□□ -0.9
MSL5YLR116W BFR2Q06631 534 aaKnown RBP9.39□□□□□ -0.91
MSL5YLR116W YGL015CP33199 130 aa9.25□□□□□ -0.93
MSL5YLR116W SPT21P35209 758 aa9□□□□□ -0.97
MSL5YLR116W CDC27P38042 758 aa9□□□□□ -0.97
MSL5YLR116W YKR023WP36119 530 aaKnown RBP8.94□□□□□ -0.98
MSL5YLR116W UBP10P53874 792 aaPredicted RBP8.85□□□□□ -0.99
MSL5YLR116W TFC8Q12308 588 aa8.78□□□□□ -1
MSL5YLR116W HOP09932 586 aa8.77□□□□□ -1.01
MSL5YLR116W MAP2P38174 421 aaKnown RBP8.77□□□□□ -1.01
MSL5YLR116W DCD1P06773 312 aa8.71□□□□□ -1.01
MSL5YLR116W RIM101P33400 625 aa8.66□□□□□ -1.02
MSL5YLR116W SCY1P53009 804 aa8.57□□□□□ -1.04
MSL5YLR116W BUD31P25337 157 aaPredicted RBP8.54□□□□□ -1.04
MSL5YLR116W TIF4632P39936 914 aaKnown RBP8.53□□□□□ -1.04
MSL5YLR116W SLX5P32828 619 aaKnown RBP8.51□□□□□ -1.05
MSL5YLR116W BCH2P36122 765 aa8.48□□□□□ -1.05
MSL5YLR116W TGL3P40308 642 aa8.45□□□□□ -1.06
MSL5YLR116W OXP1P28273 1286 aa8.33□□□□□ -1.08
MSL5YLR116W YIL055CP40523 627 aaKnown RBP8.31□□□□□ -1.08
MSL5YLR116W UBP9P39967 754 aa8.29□□□□□ -1.08
MSL5YLR116W PTP3P40048 928 aa8.29□□□□□ -1.08
MSL5YLR116W EPS1P40557 701 aa8.27□□□□□ -1.09
MSL5YLR116W BDF1P35817 686 aa8.23□□□□□ -1.09
MSL5YLR116W TFA1P36100 482 aa8.21□□□□□ -1.09
MSL5YLR116W BBC1P47068 1157 aa8.16□□□□□ -1.1
MSL5YLR116W RSM7P47150 247 aa8.15□□□□□ -1.1
MSL5YLR116W SIS1P25294 352 aaKnown RBP8.13□□□□□ -1.11
MSL5YLR116W YAH1Q12184 172 aaKnown RBP8.11□□□□□ -1.11
MSL5YLR116W AI2P03876 854 aa8.08□□□□□ -1.12
MSL5YLR116W YOR238WQ08634 303 aa8.05□□□□□ -1.12
MSL5YLR116W MST1P07236 462 aa8.04□□□□□ -1.12
MSL5YLR116W NSR1P27476 414 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
MSL5YLR116W YAP5P40574 245 aa7.98□□□□□ -1.13
MSL5YLR116W YLR271WQ06152 274 aa7.95□□□□□ -1.14
MSL5YLR116W YBL029C-AQ3E756 94 aa7.95□□□□□ -1.14
MSL5YLR116W PSD2P53037 1138 aaKnown RBP7.86□□□□□ -1.15
MSL5YLR116W VNX1P42839 908 aa7.86□□□□□ -1.15
MSL5YLR116W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
MSL5YLR116W SSP1P38871 571 aa7.84□□□□□ -1.15
MSL5YLR116W GTT3P39996 337 aa7.83□□□□□ -1.16
MSL5YLR116W SPP1Q03012 353 aa7.82□□□□□ -1.16
MSL5YLR116W WSC3Q12215 556 aa7.81□□□□□ -1.16
MSL5YLR116W MRM1P25270 412 aa7.78□□□□□ -1.16
MSL5YLR116W TIF11P38912 153 aaKnown RBP7.73□□□□□ -1.17
MSL5YLR116W PIB1Q06651 286 aa7.7□□□□□ -1.18
MSL5YLR116W MGA2P40578 1113 aa7.69□□□□□ -1.18
MSL5YLR116W CST9Q06032 482 aa7.65□□□□□ -1.18
MSL5YLR116W FKH1P40466 484 aa7.63□□□□□ -1.19
MSL5YLR116W ULI1P43604 169 aa7.63□□□□□ -1.19
MSL5YLR116W YJL171CP46992 396 aa7.63□□□□□ -1.19
MSL5YLR116W YMR1P47147 688 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
MSL5YLR116W MSB4Q12317 492 aa7.63□□□□□ -1.19
MSL5YLR116W RTG3P38165 486 aa7.62□□□□□ -1.19
MSL5YLR116W AIR2Q12476 344 aaKnown RBP7.61□□□□□ -1.19
MSL5YLR116W EAP1P36041 632 aaKnown RBP7.61□□□□□ -1.19
MSL5YLR116W LDB19Q12502 818 aa7.61□□□□□ -1.19
MSL5YLR116W DBP1P24784 617 aaKnown RBP7.59□□□□□ -1.19
MSL5YLR116W VPS29P38759 282 aa7.58□□□□□ -1.2
MSL5YLR116W IOC2Q12072 812 aa7.57□□□□□ -1.2
MSL5YLR116W YOL036WQ08206 761 aa7.54□□□□□ -1.2
MSL5YLR116W SET4P42948 560 aa7.53□□□□□ -1.2
MSL5YLR116W YFR006WP43590 535 aa7.53□□□□□ -1.2
MSL5YLR116W VMA1P17255 1071 aaKnown RBP7.52□□□□□ -1.21
MSL5YLR116W STS1P38637 319 aa7.52□□□□□ -1.21
MSL5YLR116W BMT6Q12291 365 aa7.51□□□□□ -1.21
MSL5YLR116W TRP5P00931 707 aaKnown RBP7.48□□□□□ -1.21
MSL5YLR116W SAM3Q08986 587 aa7.48□□□□□ -1.21
MSL5YLR116W RCR1P38212 213 aa7.47□□□□□ -1.21
MSL5YLR116W RTG1P32607 177 aa7.46□□□□□ -1.21
MSL5YLR116W YNL035CP53962 389 aaKnown RBP7.44□□□□□ -1.22
MSL5YLR116W ABP1P15891 592 aaKnown RBP7.43□□□□□ -1.22
MSL5YLR116W NCR1Q12200 1170 aa7.43□□□□□ -1.22
MSL5YLR116W SEC61P32915 480 aa7.42□□□□□ -1.22
MSL5YLR116W TFG1P41895 735 aaPredicted RBP7.39□□□□□ -1.23
MSL5YLR116W GYP5Q12344 894 aa7.38□□□□□ -1.23
MSL5YLR116W JIP4Q03361 876 aa7.36□□□□□ -1.23
MSL5YLR116W HTA1P04911 132 aaKnown RBP7.35□□□□□ -1.23
MSL5YLR116W HTA2P04912 132 aa7.35□□□□□ -1.23
MSL5YLR116W DCW1P36091 449 aa7.31□□□□□ -1.24
MSL5YLR116W DAN4P47179 1161 aa7.3□□□□□ -1.24
MSL5YLR116W MAK11P20484 414 aaKnown RBP7.27□□□□□ -1.24
MSL5YLR116W PTC4P38089 393 aa7.27□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms