RNA–Protein interactions for RNA: YPL180W

TCO89, Transcript of Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p), yeast

Gene TCO89, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCO89	YPL180W	RQC2	Q12532	1038 aa	Known RBP	6.98	□□□□□ -1.29
TCO89	YPL180W	BFR2	Q06631	534 aa	Known RBP	6.51	□□□□□ -1.37
TCO89	YPL180W	TAF7	Q05021	590 aa		6.48	□□□□□ -1.37
TCO89	YPL180W	MTC1	P47018	478 aa	Known RBP	6.38	□□□□□ -1.39
TCO89	YPL180W	TFA1	P36100	482 aa		6.25	□□□□□ -1.41
TCO89	YPL180W	DRS1	P32892	752 aa	Known RBP	6.2	□□□□□ -1.42
TCO89	YPL180W	URN1	Q06525	465 aa	Known RBP	6.1	□□□□□ -1.43
TCO89	YPL180W	SIS2	P36024	562 aa		5.76	□□□□□ -1.49
TCO89	YPL180W	EBP2	P36049	427 aa	Known RBP	5.68	□□□□□ -1.5
TCO89	YPL180W	NAP1	P25293	417 aa	Known RBP	5.67	□□□□□ -1.5
TCO89	YPL180W	LEO1	P38439	464 aa		5.66	□□□□□ -1.5
TCO89	YPL180W	YRB30	P53107	440 aa	Predicted RBP	5.66	□□□□□ -1.5
TCO89	YPL180W	YFR016C	P43597	1233 aa	Known RBP	5.65	□□□□□ -1.5
TCO89	YPL180W	CAB3	P36076	571 aa		5.65	□□□□□ -1.51
TCO89	YPL180W	IOC4	Q04213	475 aa		5.62	□□□□□ -1.51
TCO89	YPL180W	FAP1	P53971	965 aa		5.58	□□□□□ -1.52
TCO89	YPL180W	NOP2	P40991	618 aa	Known RBP	5.57	□□□□□ -1.52
TCO89	YPL180W	AVT3	P36062	692 aa		5.54	□□□□□ -1.52
TCO89	YPL180W	DMA1	P38823	416 aa		5.54	□□□□□ -1.52
TCO89	YPL180W	DIP2	Q12220	943 aa	Predicted RBP	5.54	□□□□□ -1.52
TCO89	YPL180W	KRI1	P42846	591 aa	Known RBP	5.53	□□□□□ -1.52
TCO89	YPL180W	RPS0B	P46654	252 aa	Known RBP	5.53	□□□□□ -1.52
TCO89	YPL180W	AIM44	Q99299	758 aa		5.52	□□□□□ -1.53
TCO89	YPL180W	IFH1	P39520	1085 aa		5.43	□□□□□ -1.54
TCO89	YPL180W	MNN4	P36044	1178 aa		5.4	□□□□□ -1.54
TCO89	YPL180W	SNU71	P53207	620 aa	Known RBP	5.38	□□□□□ -1.55
TCO89	YPL180W	TOP1	P04786	769 aa		5.38	□□□□□ -1.55
TCO89	YPL180W	PRI1	P10363	409 aa		5.36	□□□□□ -1.55
TCO89	YPL180W	ORC1	P54784	914 aa	Predicted RBP	5.35	□□□□□ -1.55
TCO89	YPL180W	CWC22	P53333	577 aa	Known RBP	5.34	□□□□□ -1.56
TCO89	YPL180W	PRY3	P47033	881 aa		5.29	□□□□□ -1.56
TCO89	YPL180W	YPR148C	Q06523	435 aa		5.29	□□□□□ -1.56
TCO89	YPL180W	YCK3	P39962	524 aa		5.29	□□□□□ -1.56
TCO89	YPL180W	AAD16	Q02895	342 aa		5.27	□□□□□ -1.57
TCO89	YPL180W	DEF1	P35732	738 aa	Known RBP	5.26	□□□□□ -1.57
TCO89	YPL180W	PSH1	Q12161	406 aa		5.26	□□□□□ -1.57
TCO89	YPL180W	MDG1	P53885	366 aa		5.25	□□□□□ -1.57
TCO89	YPL180W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.25	□□□□□ -1.57	not detected
TCO89	YPL180W	RLP24	Q07915	199 aa	Known RBP	5.24	□□□□□ -1.57
TCO89	YPL180W	RPG1	P38249	964 aa	Known RBP	5.22	□□□□□ -1.57
TCO89	YPL180W	ISW2	Q08773	1120 aa		5.19	□□□□□ -1.58
TCO89	YPL180W	GIN4	Q12263	1142 aa		5.17	□□□□□ -1.58
TCO89	YPL180W	LEU3	P08638	886 aa		5.17	□□□□□ -1.58
TCO89	YPL180W	ABP1	P15891	592 aa	Known RBP	5.15	□□□□□ -1.58
TCO89	YPL180W	SWE1	P32944	819 aa		5.15	□□□□□ -1.58
TCO89	YPL180W	ENV11	P53246	860 aa		5.15	□□□□□ -1.58
TCO89	YPL180W	DMA2	P53924	522 aa		5.14	□□□□□ -1.59
TCO89	YPL180W	TOA1	P32773	286 aa		5.14	□□□□□ -1.59
TCO89	YPL180W	BRL1	P38770	471 aa		5.14	□□□□□ -1.59
TCO89	YPL180W	HIF1	Q12373	385 aa		5.13	□□□□□ -1.59
TCO89	YPL180W	RPN1	P38764	993 aa	Known RBP	5.12	□□□□□ -1.59
TCO89	YPL180W	SUB1	P54000	292 aa	Known RBP	5.11	□□□□□ -1.59
TCO89	YPL180W	NUG1	P40010	520 aa	Known RBP	5.1	□□□□□ -1.59
TCO89	YPL180W	RLF2	Q12495	606 aa		5.1	□□□□□ -1.59
TCO89	YPL180W	RSE1	Q04693	1361 aa	Known RBP	5.09	□□□□□ -1.59
TCO89	YPL180W	SPT2	P06843	333 aa	Predicted RBP	5.09	□□□□□ -1.59
TCO89	YPL180W	RPS0A	P32905	252 aa	Known RBP	5.08	□□□□□ -1.6
TCO89	YPL180W	VPS72	Q03388	795 aa		5.08	□□□□□ -1.6
TCO89	YPL180W	FPR3	P38911	411 aa	Known RBP	5.07	□□□□□ -1.6
TCO89	YPL180W	HSP82	P02829	709 aa	Known RBP	5.07	□□□□□ -1.6
TCO89	YPL180W	ATG36	P46983	293 aa		5.07	□□□□□ -1.6
TCO89	YPL180W	PLP2	Q12017	286 aa		5.06	□□□□□ -1.6
TCO89	YPL180W	TSR3	Q12094	313 aa	Known RBP	5.06	□□□□□ -1.6
TCO89	YPL180W	TCB2	P48231	1178 aa		5.06	□□□□□ -1.6
TCO89	YPL180W	TPO2	P53283	614 aa		5.06	□□□□□ -1.6
TCO89	YPL180W	NHA1	Q99271	985 aa		5.06	□□□□□ -1.6
TCO89	YPL180W	SSA1	P10591	642 aa	Known RBP	5.05	□□□□□ -1.6
TCO89	YPL180W	SSA2	P10592	639 aa	Known RBP	5.05	□□□□□ -1.6
TCO89	YPL180W	ASF1	P32447	279 aa		5.05	□□□□□ -1.6
TCO89	YPL180W	TIF4632	P39936	914 aa	Known RBP	5.04	□□□□□ -1.6
TCO89	YPL180W	NOP53	Q12080	455 aa	Known RBP	5.04	□□□□□ -1.6
TCO89	YPL180W	TLG1	Q03322	224 aa		5.03	□□□□□ -1.6
TCO89	YPL180W	BRN1	P38170	754 aa		5.02	□□□□□ -1.61
TCO89	YPL180W	SPT7	P35177	1332 aa		5.01	□□□□□ -1.61
TCO89	YPL180W	SPT16	P32558	1035 aa	Known RBP	5.01	□□□□□ -1.61
TCO89	YPL180W	ENP1	P38333	483 aa	Known RBP	5.01	□□□□□ -1.61
TCO89	YPL180W	RNA1	P11745	407 aa	Known RBP	5	□□□□□ -1.61
TCO89	YPL180W	OSW7	P43611	510 aa		4.99	□□□□□ -1.61
TCO89	YPL180W	MPP10	P47083	593 aa	Known RBP	4.99	□□□□□ -1.61
TCO89	YPL180W	ISW1	P38144	1129 aa		4.99	□□□□□ -1.61
TCO89	YPL180W	LAM6	Q08001	693 aa		4.99	□□□□□ -1.61
TCO89	YPL180W	SAS10	Q12136	610 aa	Predicted RBP	4.98	□□□□□ -1.61
TCO89	YPL180W	RTS3	P53289	263 aa		4.98	□□□□□ -1.61
TCO89	YPL180W	QCR6	P00127	147 aa		4.97	□□□□□ -1.61
TCO89	YPL180W	FUN12	P39730	1002 aa	Known RBP	4.97	□□□□□ -1.61
TCO89	YPL180W	HAA1	Q12753	694 aa	Known RBP	4.97	□□□□□ -1.61
TCO89	YPL180W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected
TCO89	YPL180W	GRX3	Q03835	250 aa		4.96	□□□□□ -1.61
TCO89	YPL180W	SPT21	P35209	758 aa		4.95	□□□□□ -1.62
TCO89	YPL180W	YML020W	Q03722	664 aa		4.95	□□□□□ -1.62
TCO89	YPL180W	FPR4	Q06205	392 aa	Predicted RBP	4.95	□□□□□ -1.62
TCO89	YPL180W	NOP8	Q08287	484 aa	Predicted RBP	4.95	□□□□□ -1.62
TCO89	YPL180W	YGR130C	P53278	816 aa		4.94	□□□□□ -1.62
TCO89	YPL180W	BUD21	Q08492	214 aa	Predicted RBP	4.94	□□□□□ -1.62
TCO89	YPL180W	SSP1	P38871	571 aa		4.94	□□□□□ -1.62
TCO89	YPL180W	KIP3	P53086	805 aa	Known RBP	4.94	□□□□□ -1.62
TCO89	YPL180W	FAR11	P53917	953 aa		4.94	□□□□□ -1.62
TCO89	YPL180W	DAL5	P15365	543 aa		4.93	□□□□□ -1.62
TCO89	YPL180W	TAF13	P11747	167 aa		4.93	□□□□□ -1.62
TCO89	YPL180W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms