RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C MTC1P47018 478 aaKnown RBP10.14□□□□□ -0.79
SHG1YBR258C DRS1P32892 752 aaKnown RBP10.13□□□□□ -0.79
SHG1YBR258C BFR2Q06631 534 aaKnown RBP8.77□□□□□ -1.01
SHG1YBR258C DIP2Q12220 943 aaPredicted RBP8.62□□□□□ -1.03
SHG1YBR258C AVT3P36062 692 aa8.58□□□□□ -1.04
SHG1YBR258C TFA1P36100 482 aa8.34□□□□□ -1.07
SHG1YBR258C ISW2Q08773 1120 aa8.21□□□□□ -1.1
SHG1YBR258C FAP1P53971 965 aa8.17□□□□□ -1.1
SHG1YBR258C RSE1Q04693 1361 aaKnown RBP8.15□□□□□ -1.1
SHG1YBR258C PRI1P10363 409 aa8.13□□□□□ -1.11
SHG1YBR258C RPG1P38249 964 aaKnown RBP8.07□□□□□ -1.12
SHG1YBR258C AAD16Q02895 342 aa7.97□□□□□ -1.13
SHG1YBR258C RPL17AP05740 184 aaKnown RBP7.82□□□□□ -1.16
SHG1YBR258C RPL17BP46990 184 aaKnown RBP7.82□□□□□ -1.16
SHG1YBR258C REB1P21538 810 aa7.69□□□□□ -1.18
SHG1YBR258C PRY3P47033 881 aa7.65□□□□□ -1.18
SHG1YBR258C TSR3Q12094 313 aaKnown RBP7.65□□□□□ -1.18
SHG1YBR258C SPT21P35209 758 aa7.63□□□□□ -1.19
SHG1YBR258C RIM101P33400 625 aa7.51□□□□□ -1.21
SHG1YBR258C MRPL32P25348 183 aa7.37□□□□□ -1.23
SHG1YBR258C YCK3P39962 524 aa7.37□□□□□ -1.23
SHG1YBR258C YKR023WP36119 530 aaKnown RBP7.34□□□□□ -1.23
SHG1YBR258C HAA1Q12753 694 aaKnown RBP7.31□□□□□ -1.24
SHG1YBR258C OXP1P28273 1286 aa7.25□□□□□ -1.25
SHG1YBR258C TFC8Q12308 588 aa7.19□□□□□ -1.26
SHG1YBR258C CDC27P38042 758 aa7.16□□□□□ -1.26
SHG1YBR258C SSP1P38871 571 aa7.15□□□□□ -1.26
SHG1YBR258C PTP3P40048 928 aa7.14□□□□□ -1.27
SHG1YBR258C HOP09932 586 aa7.12□□□□□ -1.27
SHG1YBR258C YIL055CP40523 627 aaKnown RBP7.08□□□□□ -1.28
SHG1YBR258C DCD1P06773 312 aa7.05□□□□□ -1.28
SHG1YBR258C YLR271WQ06152 274 aa7.05□□□□□ -1.28
SHG1YBR258C YAH1Q12184 172 aaKnown RBP7.05□□□□□ -1.28
SHG1YBR258C RQC2Q12532 1038 aaKnown RBP7.04□□□□□ -1.28
SHG1YBR258C RSM7P47150 247 aa7.03□□□□□ -1.28
SHG1YBR258C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
SHG1YBR258C BCH2P36122 765 aa6.96□□□□□ -1.3
SHG1YBR258C UBP10P53874 792 aaPredicted RBP6.93□□□□□ -1.3
SHG1YBR258C MGA2P40578 1113 aa6.91□□□□□ -1.3
SHG1YBR258C PSD2P53037 1138 aaKnown RBP6.9□□□□□ -1.3
SHG1YBR258C INO80P53115 1489 aa6.9□□□□□ -1.31
SHG1YBR258C AI2P03876 854 aa6.89□□□□□ -1.31
SHG1YBR258C YGL015CP33199 130 aa6.89□□□□□ -1.31
SHG1YBR258C EPS1P40557 701 aa6.85□□□□□ -1.31
SHG1YBR258C MON2P48563 1636 aaPredicted RBP6.85□□□□□ -1.31
SHG1YBR258C MAP2P38174 421 aaKnown RBP6.84□□□□□ -1.31
SHG1YBR258C BBC1P47068 1157 aa6.84□□□□□ -1.31
SHG1YBR258C SCY1P53009 804 aa6.82□□□□□ -1.32
SHG1YBR258C CST9Q06032 482 aa6.82□□□□□ -1.32
SHG1YBR258C BDF1P35817 686 aa6.8□□□□□ -1.32
SHG1YBR258C DMA1P38823 416 aa6.79□□□□□ -1.32
SHG1YBR258C SLX5P32828 619 aaKnown RBP6.72□□□□□ -1.33
SHG1YBR258C MRM1P25270 412 aa6.67□□□□□ -1.34
SHG1YBR258C RAM2P29703 316 aa6.6□□□□□ -1.35
SHG1YBR258C RTG3P38165 486 aa6.6□□□□□ -1.35
SHG1YBR258C NSR1P27476 414 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
SHG1YBR258C RCR1P38212 213 aa6.59□□□□□ -1.35
SHG1YBR258C TIF4632P39936 914 aaKnown RBP6.58□□□□□ -1.36
SHG1YBR258C DNA2P38859 1522 aa6.57□□□□□ -1.36
SHG1YBR258C VPS29P38759 282 aa6.56□□□□□ -1.36
SHG1YBR258C TGL3P40308 642 aa6.56□□□□□ -1.36
SHG1YBR258C SAS10Q12136 610 aaPredicted RBP6.55□□□□□ -1.36
SHG1YBR258C MAK11P20484 414 aaKnown RBP6.53□□□□□ -1.36
SHG1YBR258C YMR1P47147 688 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SHG1YBR258C STS1P38637 319 aa6.46□□□□□ -1.38
SHG1YBR258C YAP5P40574 245 aa6.45□□□□□ -1.38
SHG1YBR258C YOR238WQ08634 303 aa6.45□□□□□ -1.38
SHG1YBR258C SET1P38827 1080 aaKnown RBP6.44□□□□□ -1.38
SHG1YBR258C YPR148CQ06523 435 aa6.44□□□□□ -1.38
SHG1YBR258C NOP53Q12080 455 aaKnown RBP6.44□□□□□ -1.38
SHG1YBR258C MST1P07236 462 aa6.43□□□□□ -1.38
SHG1YBR258C DBP1P24784 617 aaKnown RBP6.43□□□□□ -1.38
SHG1YBR258C IFH1P39520 1085 aa6.41□□□□□ -1.38
SHG1YBR258C COQ8P27697 501 aa6.4□□□□□ -1.38
SHG1YBR258C EDS1P38073 919 aa6.37□□□□□ -1.39
SHG1YBR258C YFR006WP43590 535 aa6.37□□□□□ -1.39
SHG1YBR258C LEU3P08638 886 aa6.34□□□□□ -1.39
SHG1YBR258C VMA1P17255 1071 aaKnown RBP6.34□□□□□ -1.39
SHG1YBR258C CKB1P43639 278 aa6.33□□□□□ -1.4
SHG1YBR258C SAM3Q08986 587 aa6.33□□□□□ -1.4
SHG1YBR258C PTC3P34221 468 aaKnown RBP6.31□□□□□ -1.4
SHG1YBR258C MIF2P35201 549 aa6.31□□□□□ -1.4
SHG1YBR258C PIB1Q06651 286 aa6.3□□□□□ -1.4
SHG1YBR258C KOG1P38873 1557 aa6.3□□□□□ -1.4
SHG1YBR258C VPS70P47161 811 aa6.29□□□□□ -1.4
SHG1YBR258C SPA2P23201 1466 aaKnown RBP6.28□□□□□ -1.4
SHG1YBR258C SWR1Q05471 1514 aa6.24□□□□□ -1.41
SHG1YBR258C GTT3P39996 337 aa6.23□□□□□ -1.41
SHG1YBR258C ABP1P15891 592 aaKnown RBP6.22□□□□□ -1.41
SHG1YBR258C GUT1P32190 709 aa6.22□□□□□ -1.41
SHG1YBR258C LEO1P38439 464 aa6.22□□□□□ -1.41
SHG1YBR258C GRE2Q12068 342 aaKnown RBP6.22□□□□□ -1.41
SHG1YBR258C MSB4Q12317 492 aa6.22□□□□□ -1.41
SHG1YBR258C DSF2P38213 736 aa6.21□□□□□ -1.42
SHG1YBR258C REF2P42073 533 aaPredicted RBP6.2□□□□□ -1.42
SHG1YBR258C YOL036WQ08206 761 aa6.2□□□□□ -1.42
SHG1YBR258C ATH1P48016 1211 aa6.19□□□□□ -1.42
SHG1YBR258C GYP5Q12344 894 aa6.19□□□□□ -1.42
SHG1YBR258C MAK21Q12176 1025 aaKnown RBP6.18□□□□□ -1.42
SHG1YBR258C PBS2P08018 668 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms