RNA–Protein interactions for RNA: YPL083C

SEN54, Transcript of Subunit of the tRNA splicing endonuclease, yeastyeast

Gene SEN54, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN54YPL083C MTC1P47018 478 aaKnown RBP12.13□□□□□ -0.47
SEN54YPL083C DRS1P32892 752 aaKnown RBP11.08□□□□□ -0.64
SEN54YPL083C FAP1P53971 965 aa10.99□□□□□ -0.65
SEN54YPL083C PRY3P47033 881 aa10.35□□□□□ -0.75
SEN54YPL083C PRI1P10363 409 aa10.33□□□□□ -0.76
SEN54YPL083C AAD16Q02895 342 aa10.28□□□□□ -0.76
SEN54YPL083C ISW2Q08773 1120 aa10.07□□□□□ -0.8
SEN54YPL083C RPG1P38249 964 aaKnown RBP9.94□□□□□ -0.82
SEN54YPL083C YCK3P39962 524 aa9.86□□□□□ -0.83
SEN54YPL083C DIP2Q12220 943 aaPredicted RBP9.81□□□□□ -0.84
SEN54YPL083C HAA1Q12753 694 aaKnown RBP9.8□□□□□ -0.84
SEN54YPL083C TSR3Q12094 313 aaKnown RBP9.68□□□□□ -0.86
SEN54YPL083C RSE1Q04693 1361 aaKnown RBP9.55□□□□□ -0.88
SEN54YPL083C AVT3P36062 692 aa9.45□□□□□ -0.9
SEN54YPL083C MRPL32P25348 183 aa9.34□□□□□ -0.91
SEN54YPL083C RPL17AP05740 184 aaKnown RBP9.22□□□□□ -0.93
SEN54YPL083C RPL17BP46990 184 aaKnown RBP9.22□□□□□ -0.93
SEN54YPL083C REB1P21538 810 aa9.18□□□□□ -0.94
SEN54YPL083C BFR2Q06631 534 aaKnown RBP9.14□□□□□ -0.95
SEN54YPL083C YGL015CP33199 130 aa9.05□□□□□ -0.96
SEN54YPL083C SPT21P35209 758 aa8.88□□□□□ -0.99
SEN54YPL083C CDC27P38042 758 aa8.85□□□□□ -0.99
SEN54YPL083C YKR023WP36119 530 aaKnown RBP8.8□□□□□ -1
SEN54YPL083C UBP10P53874 792 aaPredicted RBP8.69□□□□□ -1.02
SEN54YPL083C TFC8Q12308 588 aa8.63□□□□□ -1.03
SEN54YPL083C MAP2P38174 421 aaKnown RBP8.58□□□□□ -1.04
SEN54YPL083C HOP09932 586 aa8.55□□□□□ -1.04
SEN54YPL083C RIM101P33400 625 aa8.54□□□□□ -1.04
SEN54YPL083C DCD1P06773 312 aa8.48□□□□□ -1.05
SEN54YPL083C BUD31P25337 157 aaPredicted RBP8.38□□□□□ -1.07
SEN54YPL083C SCY1P53009 804 aa8.37□□□□□ -1.07
SEN54YPL083C BCH2P36122 765 aa8.32□□□□□ -1.08
SEN54YPL083C SLX5P32828 619 aaKnown RBP8.3□□□□□ -1.08
SEN54YPL083C TIF4632P39936 914 aaKnown RBP8.3□□□□□ -1.08
SEN54YPL083C TGL3P40308 642 aa8.29□□□□□ -1.08
SEN54YPL083C OXP1P28273 1286 aa8.21□□□□□ -1.09
SEN54YPL083C EPS1P40557 701 aa8.1□□□□□ -1.11
SEN54YPL083C BDF1P35817 686 aa8.07□□□□□ -1.12
SEN54YPL083C UBP9P39967 754 aa8.07□□□□□ -1.12
SEN54YPL083C YIL055CP40523 627 aaKnown RBP8.05□□□□□ -1.12
SEN54YPL083C PTP3P40048 928 aa8.03□□□□□ -1.12
SEN54YPL083C TFA1P36100 482 aa8.02□□□□□ -1.13
SEN54YPL083C RSM7P47150 247 aa7.98□□□□□ -1.13
SEN54YPL083C MST1P07236 462 aa7.97□□□□□ -1.13
SEN54YPL083C NSR1P27476 414 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
SEN54YPL083C BBC1P47068 1157 aa7.93□□□□□ -1.14
SEN54YPL083C AI2P03876 854 aa7.9□□□□□ -1.14
SEN54YPL083C SIS1P25294 352 aaKnown RBP7.9□□□□□ -1.14
SEN54YPL083C YOR238WQ08634 303 aa7.87□□□□□ -1.15
SEN54YPL083C YAH1Q12184 172 aaKnown RBP7.86□□□□□ -1.15
SEN54YPL083C YLR271WQ06152 274 aa7.8□□□□□ -1.16
SEN54YPL083C YAP5P40574 245 aa7.79□□□□□ -1.16
SEN54YPL083C PSD2P53037 1138 aaKnown RBP7.75□□□□□ -1.17
SEN54YPL083C YBL029C-AQ3E756 94 aa7.75□□□□□ -1.17
SEN54YPL083C VNX1P42839 908 aa7.71□□□□□ -1.17
SEN54YPL083C SSP1P38871 571 aa7.68□□□□□ -1.18
SEN54YPL083C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
SEN54YPL083C SPP1Q03012 353 aa7.61□□□□□ -1.19
SEN54YPL083C MRM1P25270 412 aa7.59□□□□□ -1.19
SEN54YPL083C TIF11P38912 153 aaKnown RBP7.58□□□□□ -1.2
SEN54YPL083C GTT3P39996 337 aa7.58□□□□□ -1.2
SEN54YPL083C WSC3Q12215 556 aa7.58□□□□□ -1.2
SEN54YPL083C MGA2P40578 1113 aa7.52□□□□□ -1.2
SEN54YPL083C FKH1P40466 484 aa7.52□□□□□ -1.21
SEN54YPL083C CST9Q06032 482 aa7.5□□□□□ -1.21
SEN54YPL083C MSB4Q12317 492 aa7.5□□□□□ -1.21
SEN54YPL083C AIR2Q12476 344 aaKnown RBP7.5□□□□□ -1.21
SEN54YPL083C VPS29P38759 282 aa7.49□□□□□ -1.21
SEN54YPL083C YMR1P47147 688 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
SEN54YPL083C PIB1Q06651 286 aa7.47□□□□□ -1.21
SEN54YPL083C IOC2Q12072 812 aa7.47□□□□□ -1.21
SEN54YPL083C RTG3P38165 486 aa7.46□□□□□ -1.21
SEN54YPL083C ULI1P43604 169 aa7.45□□□□□ -1.22
SEN54YPL083C EAP1P36041 632 aaKnown RBP7.43□□□□□ -1.22
SEN54YPL083C LDB19Q12502 818 aa7.43□□□□□ -1.22
SEN54YPL083C DBP1P24784 617 aaKnown RBP7.42□□□□□ -1.22
SEN54YPL083C YOL036WQ08206 761 aa7.4□□□□□ -1.22
SEN54YPL083C SAM3Q08986 587 aa7.4□□□□□ -1.22
SEN54YPL083C STS1P38637 319 aa7.39□□□□□ -1.23
SEN54YPL083C YJL171CP46992 396 aa7.39□□□□□ -1.23
SEN54YPL083C VMA1P17255 1071 aaKnown RBP7.37□□□□□ -1.23
SEN54YPL083C SET4P42948 560 aa7.34□□□□□ -1.23
SEN54YPL083C YFR006WP43590 535 aa7.34□□□□□ -1.23
SEN54YPL083C TRP5P00931 707 aaKnown RBP7.33□□□□□ -1.24
SEN54YPL083C RCR1P38212 213 aa7.32□□□□□ -1.24
SEN54YPL083C BMT6Q12291 365 aa7.32□□□□□ -1.24
SEN54YPL083C ABP1P15891 592 aaKnown RBP7.29□□□□□ -1.24
SEN54YPL083C RTG1P32607 177 aa7.29□□□□□ -1.24
SEN54YPL083C SEC61P32915 480 aa7.29□□□□□ -1.24
SEN54YPL083C YNL035CP53962 389 aaKnown RBP7.29□□□□□ -1.24
SEN54YPL083C NCR1Q12200 1170 aa7.26□□□□□ -1.25
SEN54YPL083C JIP4Q03361 876 aa7.22□□□□□ -1.25
SEN54YPL083C GYP5Q12344 894 aa7.22□□□□□ -1.25
SEN54YPL083C DAN4P47179 1161 aa7.21□□□□□ -1.25
SEN54YPL083C HTA1P04911 132 aaKnown RBP7.18□□□□□ -1.26
SEN54YPL083C HTA2P04912 132 aa7.18□□□□□ -1.26
SEN54YPL083C TFG1P41895 735 aaPredicted RBP7.15□□□□□ -1.27
SEN54YPL083C MAK11P20484 414 aaKnown RBP7.14□□□□□ -1.27
SEN54YPL083C PTC4P38089 393 aa7.14□□□□□ -1.27
SEN54YPL083C RAM2P29703 316 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms