RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeastyeast

Gene CFD1, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFD1YIL003W MTC1P47018 478 aaKnown RBP12.51□□□□□ -0.41
CFD1YIL003W FAP1P53971 965 aa11.68□□□□□ -0.54
CFD1YIL003W DRS1P32892 752 aaKnown RBP11.25□□□□□ -0.61
CFD1YIL003W PRY3P47033 881 aa11□□□□□ -0.65
CFD1YIL003W PRI1P10363 409 aa10.79□□□□□ -0.68
CFD1YIL003W AAD16Q02895 342 aa10.77□□□□□ -0.69
CFD1YIL003W ISW2Q08773 1120 aa10.47□□□□□ -0.73
CFD1YIL003W YCK3P39962 524 aa10.38□□□□□ -0.75
CFD1YIL003W HAA1Q12753 694 aaKnown RBP10.36□□□□□ -0.75
CFD1YIL003W RPG1P38249 964 aaKnown RBP10.34□□□□□ -0.75
CFD1YIL003W TSR3Q12094 313 aaKnown RBP10.13□□□□□ -0.79
CFD1YIL003W DIP2Q12220 943 aaPredicted RBP10.03□□□□□ -0.8
CFD1YIL003W RSE1Q04693 1361 aaKnown RBP9.82□□□□□ -0.84
CFD1YIL003W MRPL32P25348 183 aa9.77□□□□□ -0.85
CFD1YIL003W AVT3P36062 692 aa9.57□□□□□ -0.88
CFD1YIL003W REB1P21538 810 aa9.51□□□□□ -0.89
CFD1YIL003W YGL015CP33199 130 aa9.51□□□□□ -0.89
CFD1YIL003W RPL17AP05740 184 aaKnown RBP9.5□□□□□ -0.89
CFD1YIL003W RPL17BP46990 184 aaKnown RBP9.5□□□□□ -0.89
CFD1YIL003W CDC27P38042 758 aa9.19□□□□□ -0.94
CFD1YIL003W BFR2Q06631 534 aaKnown RBP9.16□□□□□ -0.94
CFD1YIL003W SPT21P35209 758 aa9.11□□□□□ -0.95
CFD1YIL003W YKR023WP36119 530 aaKnown RBP9.08□□□□□ -0.96
CFD1YIL003W UBP10P53874 792 aaPredicted RBP9.04□□□□□ -0.96
CFD1YIL003W MAP2P38174 421 aaKnown RBP8.95□□□□□ -0.98
CFD1YIL003W BUD31P25337 157 aaPredicted RBP8.9□□□□□ -0.98
CFD1YIL003W TFC8Q12308 588 aa8.9□□□□□ -0.98
CFD1YIL003W HOP09932 586 aa8.86□□□□□ -0.99
CFD1YIL003W DCD1P06773 312 aa8.82□□□□□ -1
CFD1YIL003W RIM101P33400 625 aa8.7□□□□□ -1.02
CFD1YIL003W SCY1P53009 804 aa8.7□□□□□ -1.02
CFD1YIL003W TIF4632P39936 914 aaKnown RBP8.67□□□□□ -1.02
CFD1YIL003W TGL3P40308 642 aa8.65□□□□□ -1.02
CFD1YIL003W SLX5P32828 619 aaKnown RBP8.64□□□□□ -1.03
CFD1YIL003W BCH2P36122 765 aa8.59□□□□□ -1.03
CFD1YIL003W TFA1P36100 482 aa8.51□□□□□ -1.05
CFD1YIL003W UBP9P39967 754 aa8.51□□□□□ -1.05
CFD1YIL003W SIS1P25294 352 aaKnown RBP8.41□□□□□ -1.06
CFD1YIL003W OXP1P28273 1286 aa8.36□□□□□ -1.07
CFD1YIL003W EPS1P40557 701 aa8.34□□□□□ -1.07
CFD1YIL003W BDF1P35817 686 aa8.33□□□□□ -1.08
CFD1YIL003W MST1P07236 462 aa8.25□□□□□ -1.09
CFD1YIL003W PTP3P40048 928 aa8.25□□□□□ -1.09
CFD1YIL003W YIL055CP40523 627 aaKnown RBP8.25□□□□□ -1.09
CFD1YIL003W NSR1P27476 414 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
CFD1YIL003W YOR238WQ08634 303 aa8.18□□□□□ -1.1
CFD1YIL003W BBC1P47068 1157 aa8.15□□□□□ -1.1
CFD1YIL003W RSM7P47150 247 aa8.14□□□□□ -1.11
CFD1YIL003W YBL029C-AQ3E756 94 aa8.12□□□□□ -1.11
CFD1YIL003W AI2P03876 854 aa8.09□□□□□ -1.11
CFD1YIL003W YAP5P40574 245 aa8.07□□□□□ -1.12
CFD1YIL003W VNX1P42839 908 aa8.04□□□□□ -1.12
CFD1YIL003W YAH1Q12184 172 aaKnown RBP8.02□□□□□ -1.13
CFD1YIL003W SPP1Q03012 353 aa7.98□□□□□ -1.13
CFD1YIL003W YLR271WQ06152 274 aa7.92□□□□□ -1.14
CFD1YIL003W WSC3Q12215 556 aa7.92□□□□□ -1.14
CFD1YIL003W PSD2P53037 1138 aaKnown RBP7.88□□□□□ -1.15
CFD1YIL003W TIF11P38912 153 aaKnown RBP7.87□□□□□ -1.15
CFD1YIL003W GTT3P39996 337 aa7.87□□□□□ -1.15
CFD1YIL003W AIR2Q12476 344 aaKnown RBP7.84□□□□□ -1.15
CFD1YIL003W FKH1P40466 484 aa7.83□□□□□ -1.16
CFD1YIL003W YJL171CP46992 396 aa7.79□□□□□ -1.16
CFD1YIL003W MRM1P25270 412 aa7.77□□□□□ -1.17
CFD1YIL003W ULI1P43604 169 aa7.75□□□□□ -1.17
CFD1YIL003W PIB1Q06651 286 aa7.74□□□□□ -1.17
CFD1YIL003W IOC2Q12072 812 aa7.74□□□□□ -1.17
CFD1YIL003W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
CFD1YIL003W LDB19Q12502 818 aa7.74□□□□□ -1.17
CFD1YIL003W MSB4Q12317 492 aa7.72□□□□□ -1.17
CFD1YIL003W SSP1P38871 571 aa7.71□□□□□ -1.18
CFD1YIL003W EAP1P36041 632 aaKnown RBP7.68□□□□□ -1.18
CFD1YIL003W YMR1P47147 688 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
CFD1YIL003W BMT6Q12291 365 aa7.66□□□□□ -1.18
CFD1YIL003W RQC2Q12532 1038 aaKnown RBP7.65□□□□□ -1.18
CFD1YIL003W VPS29P38759 282 aa7.62□□□□□ -1.19
CFD1YIL003W YOL036WQ08206 761 aa7.62□□□□□ -1.19
CFD1YIL003W MGA2P40578 1113 aa7.61□□□□□ -1.19
CFD1YIL003W DBP1P24784 617 aaKnown RBP7.6□□□□□ -1.19
CFD1YIL003W RTG3P38165 486 aa7.6□□□□□ -1.19
CFD1YIL003W SET4P42948 560 aa7.6□□□□□ -1.19
CFD1YIL003W CST9Q06032 482 aa7.6□□□□□ -1.19
CFD1YIL003W TRP5P00931 707 aaKnown RBP7.58□□□□□ -1.2
CFD1YIL003W RTG1P32607 177 aa7.58□□□□□ -1.2
CFD1YIL003W VMA1P17255 1071 aaKnown RBP7.57□□□□□ -1.2
CFD1YIL003W SAM3Q08986 587 aa7.56□□□□□ -1.2
CFD1YIL003W STS1P38637 319 aa7.55□□□□□ -1.2
CFD1YIL003W NCR1Q12200 1170 aa7.55□□□□□ -1.2
CFD1YIL003W YFR006WP43590 535 aa7.54□□□□□ -1.2
CFD1YIL003W YNL035CP53962 389 aaKnown RBP7.54□□□□□ -1.2
CFD1YIL003W SEC61P32915 480 aa7.53□□□□□ -1.2
CFD1YIL003W ABP1P15891 592 aaKnown RBP7.46□□□□□ -1.22
CFD1YIL003W RCR1P38212 213 aa7.46□□□□□ -1.22
CFD1YIL003W TFG1P41895 735 aaPredicted RBP7.44□□□□□ -1.22
CFD1YIL003W DAN4P47179 1161 aa7.43□□□□□ -1.22
CFD1YIL003W JIP4Q03361 876 aa7.43□□□□□ -1.22
CFD1YIL003W GYP5Q12344 894 aa7.41□□□□□ -1.22
CFD1YIL003W HTA1P04911 132 aaKnown RBP7.37□□□□□ -1.23
CFD1YIL003W HTA2P04912 132 aa7.37□□□□□ -1.23
CFD1YIL003W SAP30P38429 201 aa7.36□□□□□ -1.23
CFD1YIL003W YDL129WQ07555 291 aa7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms