RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeastyeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC2YNL272C DRS1P32892 752 aaKnown RBP10.44□□□□□ -0.74
SEC2YNL272C MTC1P47018 478 aaKnown RBP10.43□□□□□ -0.74
SEC2YNL272C BFR2Q06631 534 aaKnown RBP9□□□□□ -0.97
SEC2YNL272C DIP2Q12220 943 aaPredicted RBP8.89□□□□□ -0.99
SEC2YNL272C AVT3P36062 692 aa8.8□□□□□ -1
SEC2YNL272C FAP1P53971 965 aa8.57□□□□□ -1.04
SEC2YNL272C ISW2Q08773 1120 aa8.45□□□□□ -1.06
SEC2YNL272C TFA1P36100 482 aa8.44□□□□□ -1.06
SEC2YNL272C PRI1P10363 409 aa8.4□□□□□ -1.06
SEC2YNL272C RPG1P38249 964 aaKnown RBP8.38□□□□□ -1.07
SEC2YNL272C RSE1Q04693 1361 aaKnown RBP8.37□□□□□ -1.07
SEC2YNL272C AAD16Q02895 342 aa8.23□□□□□ -1.09
SEC2YNL272C RPL17AP05740 184 aaKnown RBP8.09□□□□□ -1.11
SEC2YNL272C RPL17BP46990 184 aaKnown RBP8.09□□□□□ -1.11
SEC2YNL272C PRY3P47033 881 aa8.04□□□□□ -1.12
SEC2YNL272C TSR3Q12094 313 aaKnown RBP7.99□□□□□ -1.13
SEC2YNL272C REB1P21538 810 aa7.96□□□□□ -1.13
SEC2YNL272C SPT21P35209 758 aa7.83□□□□□ -1.16
SEC2YNL272C YCK3P39962 524 aa7.71□□□□□ -1.17
SEC2YNL272C RIM101P33400 625 aa7.69□□□□□ -1.18
SEC2YNL272C MRPL32P25348 183 aa7.61□□□□□ -1.19
SEC2YNL272C YKR023WP36119 530 aaKnown RBP7.59□□□□□ -1.19
SEC2YNL272C HAA1Q12753 694 aaKnown RBP7.54□□□□□ -1.2
SEC2YNL272C INO80P53115 1489 aa7.51□□□□□ -1.21
SEC2YNL272C OXP1P28273 1286 aa7.48□□□□□ -1.21
SEC2YNL272C SGS1P35187 1447 aa7.48□□□□□ -1.21
SEC2YNL272C MON2P48563 1636 aaPredicted RBP7.44□□□□□ -1.22
SEC2YNL272C CDC27P38042 758 aa7.44□□□□□ -1.22
SEC2YNL272C HOP09932 586 aa7.43□□□□□ -1.22
SEC2YNL272C TFC8Q12308 588 aa7.41□□□□□ -1.22
SEC2YNL272C DCD1P06773 312 aa7.41□□□□□ -1.22
SEC2YNL272C PTP3P40048 928 aa7.41□□□□□ -1.22
SEC2YNL272C TCB3Q03640 1545 aaKnown RBP7.34□□□□□ -1.23
SEC2YNL272C YAH1Q12184 172 aaKnown RBP7.34□□□□□ -1.24
SEC2YNL272C SSP1P38871 571 aa7.31□□□□□ -1.24
SEC2YNL272C YIL055CP40523 627 aaKnown RBP7.29□□□□□ -1.24
SEC2YNL272C YLR271WQ06152 274 aa7.26□□□□□ -1.25
SEC2YNL272C TY1B-DR4Q07793 1604 aa7.24□□□□□ -1.25
SEC2YNL272C SWR1Q05471 1514 aa7.23□□□□□ -1.25
SEC2YNL272C BCH2P36122 765 aa7.21□□□□□ -1.26
SEC2YNL272C RSM7P47150 247 aa7.2□□□□□ -1.26
SEC2YNL272C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
SEC2YNL272C DNA2P38859 1522 aa7.14□□□□□ -1.27
SEC2YNL272C MAP2P38174 421 aaKnown RBP7.11□□□□□ -1.27
SEC2YNL272C AI2P03876 854 aa7.1□□□□□ -1.27
SEC2YNL272C HSL1P34244 1518 aa7.09□□□□□ -1.27
SEC2YNL272C SPT6P23615 1451 aaKnown RBP7.09□□□□□ -1.27
SEC2YNL272C YGL015CP33199 130 aa7.09□□□□□ -1.27
SEC2YNL272C SCY1P53009 804 aa7.08□□□□□ -1.28
SEC2YNL272C EPS1P40557 701 aa7.07□□□□□ -1.28
SEC2YNL272C PSD2P53037 1138 aaKnown RBP7.07□□□□□ -1.28
SEC2YNL272C UBP10P53874 792 aaPredicted RBP7.07□□□□□ -1.28
SEC2YNL272C CST9Q06032 482 aa7.06□□□□□ -1.28
SEC2YNL272C SPA2P23201 1466 aaKnown RBP7.06□□□□□ -1.28
SEC2YNL272C MGA2P40578 1113 aa7.05□□□□□ -1.28
SEC2YNL272C KOG1P38873 1557 aa7.04□□□□□ -1.28
SEC2YNL272C BDF1P35817 686 aa7.02□□□□□ -1.29
SEC2YNL272C BBC1P47068 1157 aa7.01□□□□□ -1.29
SEC2YNL272C SSN2P38931 1420 aa7.01□□□□□ -1.29
SEC2YNL272C RQC2Q12532 1038 aaKnown RBP6.97□□□□□ -1.29
SEC2YNL272C DMA1P38823 416 aa6.96□□□□□ -1.3
SEC2YNL272C HIR3P47171 1648 aa6.95□□□□□ -1.3
SEC2YNL272C SLX5P32828 619 aaKnown RBP6.92□□□□□ -1.3
SEC2YNL272C XRN1P22147 1528 aaKnown RBP6.91□□□□□ -1.3
SEC2YNL272C MRM1P25270 412 aa6.89□□□□□ -1.31
SEC2YNL272C ECM5Q03214 1411 aa6.86□□□□□ -1.31
SEC2YNL272C RCR1P38212 213 aa6.84□□□□□ -1.31
SEC2YNL272C BUD4P47136 1447 aa6.82□□□□□ -1.32
SEC2YNL272C RAM2P29703 316 aa6.78□□□□□ -1.32
SEC2YNL272C THO2P53552 1597 aaKnown RBP6.77□□□□□ -1.33
SEC2YNL272C REV3P14284 1504 aa6.77□□□□□ -1.33
SEC2YNL272C TAF2P23255 1407 aa6.76□□□□□ -1.33
SEC2YNL272C RTG3P38165 486 aa6.76□□□□□ -1.33
SEC2YNL272C TIF4632P39936 914 aaKnown RBP6.74□□□□□ -1.33
SEC2YNL272C VPS29P38759 282 aa6.73□□□□□ -1.33
SEC2YNL272C TGL3P40308 642 aa6.72□□□□□ -1.33
SEC2YNL272C MDS3P53094 1487 aa6.71□□□□□ -1.34
SEC2YNL272C SKI3P17883 1432 aaKnown RBP6.67□□□□□ -1.34
SEC2YNL272C ATG2P53855 1592 aa6.66□□□□□ -1.34
SEC2YNL272C SIN3P22579 1536 aa6.66□□□□□ -1.34
SEC2YNL272C STS1P38637 319 aa6.66□□□□□ -1.34
SEC2YNL272C PEP1P32319 1579 aa6.66□□□□□ -1.34
SEC2YNL272C NSR1P27476 414 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35not detected
SEC2YNL272C YMR1P47147 688 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
SEC2YNL272C MAK11P20484 414 aaKnown RBP6.64□□□□□ -1.35
SEC2YNL272C SSK2P53599 1579 aa6.63□□□□□ -1.35
SEC2YNL272C YFR006WP43590 535 aa6.62□□□□□ -1.35
SEC2YNL272C YOR238WQ08634 303 aa6.62□□□□□ -1.35
SEC2YNL272C DBP1P24784 617 aaKnown RBP6.61□□□□□ -1.35
SEC2YNL272C YAP5P40574 245 aa6.6□□□□□ -1.35
SEC2YNL272C PIB1Q06651 286 aa6.6□□□□□ -1.35
SEC2YNL272C SAS10Q12136 610 aaPredicted RBP6.59□□□□□ -1.35
SEC2YNL272C SET1P38827 1080 aaKnown RBP6.59□□□□□ -1.36
SEC2YNL272C ESP1Q03018 1630 aa6.57□□□□□ -1.36
SEC2YNL272C COQ8P27697 501 aa6.55□□□□□ -1.36
SEC2YNL272C MST1P07236 462 aa6.55□□□□□ -1.36
SEC2YNL272C EDS1P38073 919 aa6.54□□□□□ -1.36
SEC2YNL272C YPK9Q12697 1472 aa6.52□□□□□ -1.37
SEC2YNL272C MYO2P19524 1574 aaKnown RBP6.52□□□□□ -1.37
SEC2YNL272C MIF2P35201 549 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms