RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W MTC1P47018 478 aaKnown RBP13.91□□□□□ -0.18
PEX4YGR133W FAP1P53971 965 aa13.54□□□□□ -0.24
PEX4YGR133W PRY3P47033 881 aa12.77□□□□□ -0.37
PEX4YGR133W AAD16Q02895 342 aa12.25□□□□□ -0.45
PEX4YGR133W PRI1P10363 409 aa12.22□□□□□ -0.45
PEX4YGR133W DRS1P32892 752 aaKnown RBP12.15□□□□□ -0.46
PEX4YGR133W YCK3P39962 524 aa12.02□□□□□ -0.49
PEX4YGR133W HAA1Q12753 694 aaKnown RBP11.86□□□□□ -0.51
PEX4YGR133W ISW2Q08773 1120 aa11.7□□□□□ -0.54
PEX4YGR133W RPG1P38249 964 aaKnown RBP11.65□□□□□ -0.54
PEX4YGR133W TSR3Q12094 313 aaKnown RBP11.54□□□□□ -0.56
PEX4YGR133W MRPL32P25348 183 aa11.05□□□□□ -0.64
PEX4YGR133W DIP2Q12220 943 aaPredicted RBP10.96□□□□□ -0.65
PEX4YGR133W RSE1Q04693 1361 aaKnown RBP10.82□□□□□ -0.68
PEX4YGR133W YGL015CP33199 130 aa10.81□□□□□ -0.68
PEX4YGR133W REB1P21538 810 aa10.59□□□□□ -0.71
PEX4YGR133W RPL17AP05740 184 aaKnown RBP10.57□□□□□ -0.72
PEX4YGR133W RPL17BP46990 184 aaKnown RBP10.57□□□□□ -0.72
PEX4YGR133W CDC27P38042 758 aa10.38□□□□□ -0.75
PEX4YGR133W AVT3P36062 692 aa10.31□□□□□ -0.76
PEX4YGR133W BUD31P25337 157 aaPredicted RBP10.3□□□□□ -0.76
PEX4YGR133W MAP2P38174 421 aaKnown RBP10.15□□□□□ -0.78
PEX4YGR133W YKR023WP36119 530 aaKnown RBP10.13□□□□□ -0.79
PEX4YGR133W UBP10P53874 792 aaPredicted RBP10.13□□□□□ -0.79
PEX4YGR133W SPT21P35209 758 aa10.02□□□□□ -0.81
PEX4YGR133W DCD1P06773 312 aa9.95□□□□□ -0.82
PEX4YGR133W HOP09932 586 aa9.95□□□□□ -0.82
PEX4YGR133W TFC8Q12308 588 aa9.91□□□□□ -0.82
PEX4YGR133W SCY1P53009 804 aa9.79□□□□□ -0.84
PEX4YGR133W SIS1P25294 352 aaKnown RBP9.75□□□□□ -0.85
PEX4YGR133W TIF4632P39936 914 aaKnown RBP9.72□□□□□ -0.85
PEX4YGR133W SLX5P32828 619 aaKnown RBP9.69□□□□□ -0.86
PEX4YGR133W TGL3P40308 642 aa9.69□□□□□ -0.86
PEX4YGR133W BFR2Q06631 534 aaKnown RBP9.68□□□□□ -0.86
PEX4YGR133W UBP9P39967 754 aa9.66□□□□□ -0.86
PEX4YGR133W BCH2P36122 765 aa9.56□□□□□ -0.88
PEX4YGR133W RIM101P33400 625 aa9.47□□□□□ -0.89
PEX4YGR133W EPS1P40557 701 aa9.26□□□□□ -0.93
PEX4YGR133W BDF1P35817 686 aa9.24□□□□□ -0.93
PEX4YGR133W YBL029C-AQ3E756 94 aa9.23□□□□□ -0.93
PEX4YGR133W MST1P07236 462 aa9.17□□□□□ -0.94
PEX4YGR133W OXP1P28273 1286 aa9.15□□□□□ -0.94
PEX4YGR133W YOR238WQ08634 303 aa9.13□□□□□ -0.95
PEX4YGR133W PTP3P40048 928 aa9.06□□□□□ -0.96
PEX4YGR133W VNX1P42839 908 aa9.06□□□□□ -0.96
PEX4YGR133W YIL055CP40523 627 aaKnown RBP9□□□□□ -0.97
PEX4YGR133W NSR1P27476 414 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97 RIP-Chip
PEX4YGR133W SPP1Q03012 353 aa8.98□□□□□ -0.97
PEX4YGR133W WSC3Q12215 556 aa8.97□□□□□ -0.97
PEX4YGR133W YAP5P40574 245 aa8.94□□□□□ -0.98
PEX4YGR133W BBC1P47068 1157 aa8.91□□□□□ -0.98
PEX4YGR133W AI2P03876 854 aa8.87□□□□□ -0.99
PEX4YGR133W RSM7P47150 247 aa8.87□□□□□ -0.99
PEX4YGR133W AIR2Q12476 344 aaKnown RBP8.87□□□□□ -0.99
PEX4YGR133W YJL171CP46992 396 aa8.83□□□□□ -1
PEX4YGR133W TIF11P38912 153 aaKnown RBP8.82□□□□□ -1
PEX4YGR133W FKH1P40466 484 aa8.82□□□□□ -1
PEX4YGR133W YAH1Q12184 172 aaKnown RBP8.8□□□□□ -1
PEX4YGR133W GTT3P39996 337 aa8.79□□□□□ -1
PEX4YGR133W LDB19Q12502 818 aa8.72□□□□□ -1.01
PEX4YGR133W PIB1Q06651 286 aa8.69□□□□□ -1.02
PEX4YGR133W ULI1P43604 169 aa8.68□□□□□ -1.02
PEX4YGR133W IOC2Q12072 812 aa8.65□□□□□ -1.02
PEX4YGR133W BMT6Q12291 365 aa8.64□□□□□ -1.03
PEX4YGR133W YLR271WQ06152 274 aa8.58□□□□□ -1.04
PEX4YGR133W PSD2P53037 1138 aaKnown RBP8.53□□□□□ -1.04
PEX4YGR133W MRM1P25270 412 aa8.52□□□□□ -1.05
PEX4YGR133W MSB4Q12317 492 aa8.5□□□□□ -1.05
PEX4YGR133W RTG1P32607 177 aa8.48□□□□□ -1.05
PEX4YGR133W EAP1P36041 632 aaKnown RBP8.47□□□□□ -1.05
PEX4YGR133W SET4P42948 560 aa8.47□□□□□ -1.05
PEX4YGR133W YOL036WQ08206 761 aa8.46□□□□□ -1.06
PEX4YGR133W TRP5P00931 707 aaKnown RBP8.45□□□□□ -1.06
PEX4YGR133W NCR1Q12200 1170 aa8.43□□□□□ -1.06
PEX4YGR133W DBP1P24784 617 aaKnown RBP8.36□□□□□ -1.07
PEX4YGR133W YNL035CP53962 389 aaKnown RBP8.36□□□□□ -1.07
PEX4YGR133W YFR006WP43590 535 aa8.35□□□□□ -1.07
PEX4YGR133W YMR1P47147 688 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
PEX4YGR133W SEC61P32915 480 aa8.33□□□□□ -1.08
PEX4YGR133W VPS29P38759 282 aa8.33□□□□□ -1.08
PEX4YGR133W VMA1P17255 1071 aaKnown RBP8.31□□□□□ -1.08
PEX4YGR133W STS1P38637 319 aa8.28□□□□□ -1.08
PEX4YGR133W CST9Q06032 482 aa8.25□□□□□ -1.09
PEX4YGR133W SAM3Q08986 587 aa8.25□□□□□ -1.09
PEX4YGR133W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
PEX4YGR133W RTG3P38165 486 aa8.24□□□□□ -1.09
PEX4YGR133W SAP30P38429 201 aa8.24□□□□□ -1.09
PEX4YGR133W TFG1P41895 735 aaPredicted RBP8.24□□□□□ -1.09
PEX4YGR133W SSP1P38871 571 aa8.22□□□□□ -1.09
PEX4YGR133W TFA1P36100 482 aa8.2□□□□□ -1.1
PEX4YGR133W DAN4P47179 1161 aa8.2□□□□□ -1.1
PEX4YGR133W BCK2P33306 851 aa8.19□□□□□ -1.1
PEX4YGR133W RCR1P38212 213 aa8.15□□□□□ -1.1
PEX4YGR133W JIP4Q03361 876 aa8.15□□□□□ -1.1
PEX4YGR133W YDL129WQ07555 291 aa8.15□□□□□ -1.1
PEX4YGR133W CHL1P22516 861 aaPredicted RBP8.14□□□□□ -1.11
PEX4YGR133W GYP5Q12344 894 aa8.13□□□□□ -1.11
PEX4YGR133W MGA2P40578 1113 aa8.12□□□□□ -1.11
PEX4YGR133W DCW1P36091 449 aa8.1□□□□□ -1.11
PEX4YGR133W PRE3P38624 215 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms