RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C MTC1P47018 478 aaKnown RBP13.88□□□□□ -0.19
PBA1YLR199C FAP1P53971 965 aa13.45□□□□□ -0.26
PBA1YLR199C PRY3P47033 881 aa12.69□□□□□ -0.38
PBA1YLR199C AAD16Q02895 342 aa12.23□□□□□ -0.45
PBA1YLR199C PRI1P10363 409 aa12.18□□□□□ -0.46
PBA1YLR199C DRS1P32892 752 aaKnown RBP12.09□□□□□ -0.47
PBA1YLR199C YCK3P39962 524 aa11.94□□□□□ -0.5
PBA1YLR199C HAA1Q12753 694 aaKnown RBP11.87□□□□□ -0.51
PBA1YLR199C ISW2Q08773 1120 aa11.7□□□□□ -0.54
PBA1YLR199C RPG1P38249 964 aaKnown RBP11.6□□□□□ -0.55
PBA1YLR199C TSR3Q12094 313 aaKnown RBP11.46□□□□□ -0.57
PBA1YLR199C MRPL32P25348 183 aa11.03□□□□□ -0.64
PBA1YLR199C DIP2Q12220 943 aaPredicted RBP10.92□□□□□ -0.66
PBA1YLR199C YGL015CP33199 130 aa10.83□□□□□ -0.68
PBA1YLR199C RSE1Q04693 1361 aaKnown RBP10.81□□□□□ -0.68
PBA1YLR199C REB1P21538 810 aa10.55□□□□□ -0.72
PBA1YLR199C RPL17AP05740 184 aaKnown RBP10.51□□□□□ -0.73
PBA1YLR199C RPL17BP46990 184 aaKnown RBP10.51□□□□□ -0.73
PBA1YLR199C CDC27P38042 758 aa10.32□□□□□ -0.76
PBA1YLR199C BUD31P25337 157 aaPredicted RBP10.31□□□□□ -0.76
PBA1YLR199C AVT3P36062 692 aa10.29□□□□□ -0.76
PBA1YLR199C UBP10P53874 792 aaPredicted RBP10.15□□□□□ -0.78
PBA1YLR199C MAP2P38174 421 aaKnown RBP10.1□□□□□ -0.79
PBA1YLR199C YKR023WP36119 530 aaKnown RBP10.08□□□□□ -0.8
PBA1YLR199C SPT21P35209 758 aa10.01□□□□□ -0.81
PBA1YLR199C TFC8Q12308 588 aa9.88□□□□□ -0.83
PBA1YLR199C HOP09932 586 aa9.87□□□□□ -0.83
PBA1YLR199C DCD1P06773 312 aa9.85□□□□□ -0.83
PBA1YLR199C TIF4632P39936 914 aaKnown RBP9.75□□□□□ -0.85
PBA1YLR199C SCY1P53009 804 aa9.75□□□□□ -0.85
PBA1YLR199C SIS1P25294 352 aaKnown RBP9.73□□□□□ -0.85
PBA1YLR199C TGL3P40308 642 aa9.73□□□□□ -0.85
PBA1YLR199C UBP9P39967 754 aa9.69□□□□□ -0.86
PBA1YLR199C SLX5P32828 619 aaKnown RBP9.68□□□□□ -0.86
PBA1YLR199C BFR2Q06631 534 aaKnown RBP9.65□□□□□ -0.86
PBA1YLR199C BCH2P36122 765 aa9.52□□□□□ -0.89
PBA1YLR199C RIM101P33400 625 aa9.46□□□□□ -0.9
PBA1YLR199C EPS1P40557 701 aa9.23□□□□□ -0.93
PBA1YLR199C MST1P07236 462 aa9.22□□□□□ -0.93
PBA1YLR199C BDF1P35817 686 aa9.21□□□□□ -0.94
PBA1YLR199C YBL029C-AQ3E756 94 aa9.19□□□□□ -0.94
PBA1YLR199C YOR238WQ08634 303 aa9.14□□□□□ -0.95
PBA1YLR199C OXP1P28273 1286 aa9.11□□□□□ -0.95
PBA1YLR199C NSR1P27476 414 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
PBA1YLR199C VNX1P42839 908 aa9.05□□□□□ -0.96
PBA1YLR199C PTP3P40048 928 aa9.01□□□□□ -0.97
PBA1YLR199C YIL055CP40523 627 aaKnown RBP8.98□□□□□ -0.97
PBA1YLR199C SPP1Q03012 353 aa8.98□□□□□ -0.97
PBA1YLR199C YAP5P40574 245 aa8.96□□□□□ -0.98
PBA1YLR199C BBC1P47068 1157 aa8.92□□□□□ -0.98
PBA1YLR199C WSC3Q12215 556 aa8.92□□□□□ -0.98
PBA1YLR199C AIR2Q12476 344 aaKnown RBP8.87□□□□□ -0.99
PBA1YLR199C RSM7P47150 247 aa8.86□□□□□ -0.99
PBA1YLR199C AI2P03876 854 aa8.85□□□□□ -0.99
PBA1YLR199C TIF11P38912 153 aaKnown RBP8.84□□□□□ -0.99
PBA1YLR199C FKH1P40466 484 aa8.84□□□□□ -0.99
PBA1YLR199C YJL171CP46992 396 aa8.84□□□□□ -0.99
PBA1YLR199C GTT3P39996 337 aa8.79□□□□□ -1
PBA1YLR199C YAH1Q12184 172 aaKnown RBP8.71□□□□□ -1.02
PBA1YLR199C LDB19Q12502 818 aa8.7□□□□□ -1.02
PBA1YLR199C ULI1P43604 169 aa8.68□□□□□ -1.02
PBA1YLR199C IOC2Q12072 812 aa8.67□□□□□ -1.02
PBA1YLR199C BMT6Q12291 365 aa8.66□□□□□ -1.02
PBA1YLR199C PIB1Q06651 286 aa8.6□□□□□ -1.03
PBA1YLR199C MSB4Q12317 492 aa8.56□□□□□ -1.04
PBA1YLR199C YLR271WQ06152 274 aa8.55□□□□□ -1.04
PBA1YLR199C EAP1P36041 632 aaKnown RBP8.53□□□□□ -1.04
PBA1YLR199C PSD2P53037 1138 aaKnown RBP8.53□□□□□ -1.04
PBA1YLR199C MRM1P25270 412 aa8.48□□□□□ -1.05
PBA1YLR199C RTG1P32607 177 aa8.48□□□□□ -1.05
PBA1YLR199C YOL036WQ08206 761 aa8.45□□□□□ -1.06
PBA1YLR199C TRP5P00931 707 aaKnown RBP8.44□□□□□ -1.06
PBA1YLR199C SET4P42948 560 aa8.44□□□□□ -1.06
PBA1YLR199C NCR1Q12200 1170 aa8.44□□□□□ -1.06
PBA1YLR199C YNL035CP53962 389 aaKnown RBP8.39□□□□□ -1.07
PBA1YLR199C SEC61P32915 480 aa8.38□□□□□ -1.07
PBA1YLR199C YMR1P47147 688 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
PBA1YLR199C DBP1P24784 617 aaKnown RBP8.33□□□□□ -1.08
PBA1YLR199C VPS29P38759 282 aa8.31□□□□□ -1.08
PBA1YLR199C VMA1P17255 1071 aaKnown RBP8.3□□□□□ -1.08
PBA1YLR199C TFA1P36100 482 aa8.3□□□□□ -1.08
PBA1YLR199C YFR006WP43590 535 aa8.29□□□□□ -1.08
PBA1YLR199C SAM3Q08986 587 aa8.29□□□□□ -1.08
PBA1YLR199C TFG1P41895 735 aaPredicted RBP8.28□□□□□ -1.08
PBA1YLR199C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
PBA1YLR199C STS1P38637 319 aa8.25□□□□□ -1.09
PBA1YLR199C RTG3P38165 486 aa8.24□□□□□ -1.09
PBA1YLR199C BCK2P33306 851 aa8.22□□□□□ -1.09
PBA1YLR199C SAP30P38429 201 aa8.22□□□□□ -1.09
PBA1YLR199C DAN4P47179 1161 aa8.22□□□□□ -1.09
PBA1YLR199C SSP1P38871 571 aa8.21□□□□□ -1.1
PBA1YLR199C JIP4Q03361 876 aa8.2□□□□□ -1.1
PBA1YLR199C CST9Q06032 482 aa8.19□□□□□ -1.1
PBA1YLR199C CHL1P22516 861 aaPredicted RBP8.18□□□□□ -1.1
PBA1YLR199C YDL129WQ07555 291 aa8.17□□□□□ -1.1
PBA1YLR199C ABP1P15891 592 aaKnown RBP8.16□□□□□ -1.1
PBA1YLR199C PRE3P38624 215 aa8.14□□□□□ -1.11
PBA1YLR199C MGA2P40578 1113 aa8.13□□□□□ -1.11
PBA1YLR199C GYP5Q12344 894 aa8.13□□□□□ -1.11
PBA1YLR199C HTA1P04911 132 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms