RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W MTC1P47018 478 aaKnown RBP13.25□□□□□ -0.29
LIF1YGL090W FAP1P53971 965 aa12.75□□□□□ -0.37
LIF1YGL090W PRY3P47033 881 aa11.99□□□□□ -0.49
LIF1YGL090W DRS1P32892 752 aaKnown RBP11.69□□□□□ -0.54
LIF1YGL090W AAD16Q02895 342 aa11.6□□□□□ -0.55
LIF1YGL090W PRI1P10363 409 aa11.56□□□□□ -0.56
LIF1YGL090W HAA1Q12753 694 aaKnown RBP11.23□□□□□ -0.61
LIF1YGL090W YCK3P39962 524 aa11.22□□□□□ -0.61
LIF1YGL090W ISW2Q08773 1120 aa11.18□□□□□ -0.62
LIF1YGL090W RPG1P38249 964 aaKnown RBP11.05□□□□□ -0.64
LIF1YGL090W TSR3Q12094 313 aaKnown RBP10.89□□□□□ -0.67
LIF1YGL090W MRPL32P25348 183 aa10.51□□□□□ -0.73
LIF1YGL090W DIP2Q12220 943 aaPredicted RBP10.51□□□□□ -0.73
LIF1YGL090W RSE1Q04693 1361 aaKnown RBP10.37□□□□□ -0.75
LIF1YGL090W YGL015CP33199 130 aa10.28□□□□□ -0.76
LIF1YGL090W REB1P21538 810 aa10.12□□□□□ -0.79
LIF1YGL090W RPL17AP05740 184 aaKnown RBP10.06□□□□□ -0.8
LIF1YGL090W RPL17BP46990 184 aaKnown RBP10.06□□□□□ -0.8
LIF1YGL090W AVT3P36062 692 aa9.9□□□□□ -0.82
LIF1YGL090W CDC27P38042 758 aa9.8□□□□□ -0.84
LIF1YGL090W BUD31P25337 157 aaPredicted RBP9.7□□□□□ -0.86
LIF1YGL090W UBP10P53874 792 aaPredicted RBP9.65□□□□□ -0.86
LIF1YGL090W YKR023WP36119 530 aaKnown RBP9.61□□□□□ -0.87
LIF1YGL090W MAP2P38174 421 aaKnown RBP9.59□□□□□ -0.87
LIF1YGL090W SPT21P35209 758 aa9.54□□□□□ -0.88
LIF1YGL090W BFR2Q06631 534 aaKnown RBP9.54□□□□□ -0.88
LIF1YGL090W HOP09932 586 aa9.42□□□□□ -0.9
LIF1YGL090W TFC8Q12308 588 aa9.42□□□□□ -0.9
LIF1YGL090W DCD1P06773 312 aa9.39□□□□□ -0.91
LIF1YGL090W TIF4632P39936 914 aaKnown RBP9.3□□□□□ -0.92
LIF1YGL090W SCY1P53009 804 aa9.28□□□□□ -0.92
LIF1YGL090W TGL3P40308 642 aa9.25□□□□□ -0.93
LIF1YGL090W SLX5P32828 619 aaKnown RBP9.22□□□□□ -0.93
LIF1YGL090W UBP9P39967 754 aa9.21□□□□□ -0.94
LIF1YGL090W SIS1P25294 352 aaKnown RBP9.2□□□□□ -0.94
LIF1YGL090W RIM101P33400 625 aa9.08□□□□□ -0.96
LIF1YGL090W BCH2P36122 765 aa9.08□□□□□ -0.96
LIF1YGL090W EPS1P40557 701 aa8.81□□□□□ -1
LIF1YGL090W BDF1P35817 686 aa8.8□□□□□ -1
LIF1YGL090W MST1P07236 462 aa8.75□□□□□ -1.01
LIF1YGL090W OXP1P28273 1286 aa8.73□□□□□ -1.01
LIF1YGL090W YOR238WQ08634 303 aa8.72□□□□□ -1.01
LIF1YGL090W YBL029C-AQ3E756 94 aa8.72□□□□□ -1.01
LIF1YGL090W PTP3P40048 928 aa8.68□□□□□ -1.02
LIF1YGL090W YIL055CP40523 627 aaKnown RBP8.68□□□□□ -1.02
LIF1YGL090W NSR1P27476 414 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
LIF1YGL090W VNX1P42839 908 aa8.61□□□□□ -1.03
LIF1YGL090W BBC1P47068 1157 aa8.58□□□□□ -1.04
LIF1YGL090W YAP5P40574 245 aa8.56□□□□□ -1.04
LIF1YGL090W SPP1Q03012 353 aa8.55□□□□□ -1.04
LIF1YGL090W RSM7P47150 247 aa8.53□□□□□ -1.04
LIF1YGL090W WSC3Q12215 556 aa8.5□□□□□ -1.05
LIF1YGL090W AI2P03876 854 aa8.49□□□□□ -1.05
LIF1YGL090W YJL171CP46992 396 aa8.43□□□□□ -1.06
LIF1YGL090W TIF11P38912 153 aaKnown RBP8.41□□□□□ -1.06
LIF1YGL090W GTT3P39996 337 aa8.41□□□□□ -1.06
LIF1YGL090W YAH1Q12184 172 aaKnown RBP8.41□□□□□ -1.06
LIF1YGL090W AIR2Q12476 344 aaKnown RBP8.4□□□□□ -1.06
LIF1YGL090W FKH1P40466 484 aa8.36□□□□□ -1.07
LIF1YGL090W LDB19Q12502 818 aa8.29□□□□□ -1.08
LIF1YGL090W TFA1P36100 482 aa8.28□□□□□ -1.08
LIF1YGL090W ULI1P43604 169 aa8.27□□□□□ -1.09
LIF1YGL090W IOC2Q12072 812 aa8.24□□□□□ -1.09
LIF1YGL090W BMT6Q12291 365 aa8.24□□□□□ -1.09
LIF1YGL090W PIB1Q06651 286 aa8.23□□□□□ -1.09
LIF1YGL090W YLR271WQ06152 274 aa8.22□□□□□ -1.09
LIF1YGL090W PSD2P53037 1138 aaKnown RBP8.18□□□□□ -1.1
LIF1YGL090W MSB4Q12317 492 aa8.17□□□□□ -1.1
LIF1YGL090W EAP1P36041 632 aaKnown RBP8.16□□□□□ -1.1
LIF1YGL090W MRM1P25270 412 aa8.15□□□□□ -1.1
LIF1YGL090W RTG1P32607 177 aa8.08□□□□□ -1.12
LIF1YGL090W SET4P42948 560 aa8.07□□□□□ -1.12
LIF1YGL090W YOL036WQ08206 761 aa8.06□□□□□ -1.12
LIF1YGL090W NCR1Q12200 1170 aa8.06□□□□□ -1.12
LIF1YGL090W TRP5P00931 707 aaKnown RBP8.05□□□□□ -1.12
LIF1YGL090W YMR1P47147 688 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
LIF1YGL090W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
LIF1YGL090W YNL035CP53962 389 aaKnown RBP8.01□□□□□ -1.13
LIF1YGL090W DBP1P24784 617 aaKnown RBP8□□□□□ -1.13
LIF1YGL090W SEC61P32915 480 aa8□□□□□ -1.13
LIF1YGL090W VPS29P38759 282 aa7.96□□□□□ -1.14
LIF1YGL090W SSP1P38871 571 aa7.96□□□□□ -1.14
LIF1YGL090W VMA1P17255 1071 aaKnown RBP7.95□□□□□ -1.14
LIF1YGL090W RTG3P38165 486 aa7.95□□□□□ -1.14
LIF1YGL090W TFG1P41895 735 aaPredicted RBP7.95□□□□□ -1.14
LIF1YGL090W YFR006WP43590 535 aa7.95□□□□□ -1.14
LIF1YGL090W SAM3Q08986 587 aa7.92□□□□□ -1.14
LIF1YGL090W STS1P38637 319 aa7.89□□□□□ -1.15
LIF1YGL090W CST9Q06032 482 aa7.89□□□□□ -1.15
LIF1YGL090W MGA2P40578 1113 aa7.86□□□□□ -1.15
LIF1YGL090W SAP30P38429 201 aa7.85□□□□□ -1.15
LIF1YGL090W JIP4Q03361 876 aa7.85□□□□□ -1.15
LIF1YGL090W ABP1P15891 592 aaKnown RBP7.83□□□□□ -1.16
LIF1YGL090W DAN4P47179 1161 aa7.83□□□□□ -1.16
LIF1YGL090W BCK2P33306 851 aa7.82□□□□□ -1.16
LIF1YGL090W CHL1P22516 861 aaPredicted RBP7.8□□□□□ -1.16
LIF1YGL090W YDL129WQ07555 291 aa7.8□□□□□ -1.16
LIF1YGL090W GYP5Q12344 894 aa7.8□□□□□ -1.16
LIF1YGL090W HTA1P04911 132 aaKnown RBP7.77□□□□□ -1.17
LIF1YGL090W HTA2P04912 132 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms