RNA–Protein interactions for RNA: YOR149C

SMP3, Transcript of Alpha 1,2-mannosyltransferase, yeastyeast

Gene SMP3, Length 1,551 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMP3YOR149C FAP1P53971 965 aa10.14□□□□□ -0.79
SMP3YOR149C PRY3P47033 881 aa9.63□□□□□ -0.87
SMP3YOR149C DRS1P32892 752 aaKnown RBP9.58□□□□□ -0.88
SMP3YOR149C YCK3P39962 524 aa9.04□□□□□ -0.96
SMP3YOR149C HAA1Q12753 694 aaKnown RBP8.91□□□□□ -0.98
SMP3YOR149C MTC1P47018 478 aaKnown RBP8.79□□□□□ -1
SMP3YOR149C BFR2Q06631 534 aaKnown RBP8.65□□□□□ -1.03
SMP3YOR149C AAD16Q02895 342 aa8.61□□□□□ -1.03
SMP3YOR149C TFA1P36100 482 aa8.61□□□□□ -1.03
SMP3YOR149C PRI1P10363 409 aa8.37□□□□□ -1.07
SMP3YOR149C RQC2Q12532 1038 aaKnown RBP8.26□□□□□ -1.09
SMP3YOR149C BUD31P25337 157 aaPredicted RBP8.2□□□□□ -1.1
SMP3YOR149C AVT3P36062 692 aa7.93□□□□□ -1.14
SMP3YOR149C DIP2Q12220 943 aaPredicted RBP7.87□□□□□ -1.15
SMP3YOR149C YGL015CP33199 130 aa7.82□□□□□ -1.16
SMP3YOR149C TSR3Q12094 313 aaKnown RBP7.78□□□□□ -1.16
SMP3YOR149C TAF7Q05021 590 aa7.62□□□□□ -1.19
SMP3YOR149C SIS1P25294 352 aaKnown RBP7.58□□□□□ -1.2
SMP3YOR149C MRPL32P25348 183 aa7.49□□□□□ -1.21
SMP3YOR149C ISW2Q08773 1120 aa7.46□□□□□ -1.22
SMP3YOR149C RPG1P38249 964 aaKnown RBP7.45□□□□□ -1.22
SMP3YOR149C DMA1P38823 416 aa7.41□□□□□ -1.22
SMP3YOR149C RSE1Q04693 1361 aaKnown RBP7.24□□□□□ -1.25
SMP3YOR149C LEO1P38439 464 aa7.16□□□□□ -1.26
SMP3YOR149C UBP9P39967 754 aa7.07□□□□□ -1.28
SMP3YOR149C PTP3P40048 928 aa7.06□□□□□ -1.28
SMP3YOR149C RPL17AP05740 184 aaKnown RBP6.91□□□□□ -1.3
SMP3YOR149C RPL17BP46990 184 aaKnown RBP6.91□□□□□ -1.3
SMP3YOR149C LEU3P08638 886 aa6.83□□□□□ -1.32
SMP3YOR149C SSP1P38871 571 aa6.82□□□□□ -1.32
SMP3YOR149C UBP10P53874 792 aaPredicted RBP6.82□□□□□ -1.32
SMP3YOR149C REB1P21538 810 aa6.79□□□□□ -1.32
SMP3YOR149C MAP2P38174 421 aaKnown RBP6.76□□□□□ -1.33
SMP3YOR149C RIM101P33400 625 aa6.73□□□□□ -1.33
SMP3YOR149C SAS10Q12136 610 aaPredicted RBP6.72□□□□□ -1.33
SMP3YOR149C CDC27P38042 758 aa6.71□□□□□ -1.34
SMP3YOR149C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
SMP3YOR149C SPT21P35209 758 aa6.65□□□□□ -1.35
SMP3YOR149C YAH1Q12184 172 aaKnown RBP6.62□□□□□ -1.35
SMP3YOR149C RPN1P38764 993 aaKnown RBP6.61□□□□□ -1.35
SMP3YOR149C DMA2P53924 522 aa6.6□□□□□ -1.35
SMP3YOR149C TGL3P40308 642 aa6.57□□□□□ -1.36
SMP3YOR149C TIF4632P39936 914 aaKnown RBP6.55□□□□□ -1.36
SMP3YOR149C YIL055CP40523 627 aaKnown RBP6.55□□□□□ -1.36
SMP3YOR149C OXP1P28273 1286 aa6.53□□□□□ -1.36
SMP3YOR149C MGA2P40578 1113 aa6.51□□□□□ -1.37
SMP3YOR149C YLR271WQ06152 274 aa6.51□□□□□ -1.37
SMP3YOR149C RLF2Q12495 606 aa6.5□□□□□ -1.37
SMP3YOR149C RGA2Q06407 1009 aa6.45□□□□□ -1.38
SMP3YOR149C SPB4P25808 606 aaPredicted RBP6.44□□□□□ -1.38
SMP3YOR149C CKB1P43639 278 aa6.42□□□□□ -1.38
SMP3YOR149C RSM7P47150 247 aa6.4□□□□□ -1.39
SMP3YOR149C YKR023WP36119 530 aaKnown RBP6.35□□□□□ -1.39
SMP3YOR149C ABP1P15891 592 aaKnown RBP6.35□□□□□ -1.39
SMP3YOR149C CST9Q06032 482 aa6.35□□□□□ -1.39
SMP3YOR149C HGH1P48362 394 aaKnown RBP6.33□□□□□ -1.4
SMP3YOR149C VPS70P47161 811 aa6.31□□□□□ -1.4
SMP3YOR149C SET1P38827 1080 aaKnown RBP6.31□□□□□ -1.4
SMP3YOR149C IFH1P39520 1085 aa6.3□□□□□ -1.4
SMP3YOR149C YBL029C-AQ3E756 94 aa6.29□□□□□ -1.4
SMP3YOR149C SLX5P32828 619 aaKnown RBP6.27□□□□□ -1.41
SMP3YOR149C AIM44Q99299 758 aa6.27□□□□□ -1.41
SMP3YOR149C YJL171CP46992 396 aa6.27□□□□□ -1.41
SMP3YOR149C YPR148CQ06523 435 aa6.27□□□□□ -1.41
SMP3YOR149C PSD2P53037 1138 aaKnown RBP6.25□□□□□ -1.41
SMP3YOR149C TFC8Q12308 588 aa6.24□□□□□ -1.41
SMP3YOR149C KIN1P13185 1064 aa6.23□□□□□ -1.41
SMP3YOR149C AI2P03876 854 aa6.22□□□□□ -1.41
SMP3YOR149C RAM2P29703 316 aa6.22□□□□□ -1.41
SMP3YOR149C SCY1P53009 804 aa6.22□□□□□ -1.41
SMP3YOR149C AIR2Q12476 344 aaKnown RBP6.22□□□□□ -1.41
SMP3YOR149C HOP09932 586 aa6.21□□□□□ -1.42
SMP3YOR149C DSF2P38213 736 aa6.21□□□□□ -1.42
SMP3YOR149C YNR021WP53723 404 aaKnown RBP6.21□□□□□ -1.42
SMP3YOR149C PBS2P08018 668 aa6.18□□□□□ -1.42
SMP3YOR149C BBC1P47068 1157 aa6.18□□□□□ -1.42
SMP3YOR149C DCD1P06773 312 aa6.17□□□□□ -1.42
SMP3YOR149C AIM7Q12156 149 aa6.14□□□□□ -1.43
SMP3YOR149C GLC3P32775 704 aa6.14□□□□□ -1.43
SMP3YOR149C MAM3Q12296 706 aa6.12□□□□□ -1.43
SMP3YOR149C VNX1P42839 908 aa6.11□□□□□ -1.43
SMP3YOR149C FKH1P40466 484 aa6.1□□□□□ -1.43
SMP3YOR149C YML020WQ03722 664 aa6.1□□□□□ -1.43
SMP3YOR149C MAK11P20484 414 aaKnown RBP6.08□□□□□ -1.44
SMP3YOR149C MRM1P25270 412 aa6.08□□□□□ -1.44
SMP3YOR149C IES2P40154 320 aa6.08□□□□□ -1.44
SMP3YOR149C GUA1P38625 525 aaKnown RBP6.06□□□□□ -1.44
SMP3YOR149C MAK21Q12176 1025 aaKnown RBP6.06□□□□□ -1.44
SMP3YOR149C SSA1P10591 642 aaKnown RBP6.06□□□□□ -1.44
SMP3YOR149C RTG3P38165 486 aa6.06□□□□□ -1.44
SMP3YOR149C RCR1P38212 213 aa6.06□□□□□ -1.44
SMP3YOR149C SLX8P40072 274 aa6.05□□□□□ -1.44
SMP3YOR149C ATF2P53296 535 aa6.05□□□□□ -1.44
SMP3YOR149C SPP1Q03012 353 aa6.05□□□□□ -1.44
SMP3YOR149C MST1P07236 462 aa6.03□□□□□ -1.44
SMP3YOR149C BCH2P36122 765 aa6.03□□□□□ -1.44
SMP3YOR149C GEF1P37020 779 aa6.03□□□□□ -1.44
SMP3YOR149C HPC2Q01448 625 aa6.03□□□□□ -1.44
SMP3YOR149C REF2P42073 533 aaPredicted RBP6.02□□□□□ -1.45
SMP3YOR149C DIT2P21595 489 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms