Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
VPS11Q9H270 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS11Q9H270 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS11Q9H270 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS11Q9H270 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS11Q9H270 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.69■■□□□ 1.86
VPS11Q9H270 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
VPS11Q9H270 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS11Q9H270 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.68■■□□□ 1.86
VPS11Q9H270 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS11Q9H270 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS11Q9H270 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS11Q9H270 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS11Q9H270 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS11Q9H270 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.65■■□□□ 1.86
VPS11Q9H270 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
VPS11Q9H270 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS11Q9H270 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
VPS11Q9H270 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS11Q9H270 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
VPS11Q9H270 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.63■■□□□ 1.85
VPS11Q9H270 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
VPS11Q9H270 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
VPS11Q9H270 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS11Q9H270 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
VPS11Q9H270 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.61■■□□□ 1.85
VPS11Q9H270 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
VPS11Q9H270 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS11Q9H270 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS11Q9H270 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS11Q9H270 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS11Q9H270 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS11Q9H270 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS11Q9H270 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
VPS11Q9H270 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS11Q9H270 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
VPS11Q9H270 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS11Q9H270 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
VPS11Q9H270 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS11Q9H270 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.57■■□□□ 1.84
VPS11Q9H270 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS11Q9H270 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VPS11Q9H270 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS11Q9H270 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS11Q9H270 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS11Q9H270 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VPS11Q9H270 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS11Q9H270 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VPS11Q9H270 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS11Q9H270 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.53■■□□□ 1.84
VPS11Q9H270 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS11Q9H270 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS11Q9H270 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VPS11Q9H270 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.52■■□□□ 1.84
VPS11Q9H270 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.52■■□□□ 1.84
VPS11Q9H270 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS11Q9H270 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS11Q9H270 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS11Q9H270 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS11Q9H270 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS11Q9H270 AL135925.1-201ENST00000605920 1701 ntBASIC26.5■■□□□ 1.83
VPS11Q9H270 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS11Q9H270 AC142086.6-201ENST00000621154 1765 ntBASIC26.49■■□□□ 1.83
VPS11Q9H270 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS11Q9H270 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS11Q9H270 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS11Q9H270 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS11Q9H270 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS11Q9H270 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS11Q9H270 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS11Q9H270 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS11Q9H270 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.46■■□□□ 1.83
VPS11Q9H270 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS11Q9H270 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
VPS11Q9H270 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.45■■□□□ 1.83
VPS11Q9H270 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
VPS11Q9H270 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
VPS11Q9H270 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS11Q9H270 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS11Q9H270 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.44■■□□□ 1.82
VPS11Q9H270 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS11Q9H270 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.43■■□□□ 1.82
VPS11Q9H270 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS11Q9H270 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
VPS11Q9H270 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS11Q9H270 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS11Q9H270 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
VPS11Q9H270 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS11Q9H270 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.42■■□□□ 1.82
VPS11Q9H270 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS11Q9H270 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS11Q9H270 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.39■■□□□ 1.81
VPS11Q9H270 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
VPS11Q9H270 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS11Q9H270 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS11Q9H270 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS11Q9H270 WASH5P-204ENST00000632292 975 ntBASIC26.36■■□□□ 1.81
VPS11Q9H270 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.36■■□□□ 1.81
VPS11Q9H270 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS11Q9H270 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms