Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRPM4Q8TD43 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
TRPM4Q8TD43 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.55■■■□□ 2.8
TRPM4Q8TD43 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.54■■■□□ 2.8
TRPM4Q8TD43 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.53■■■□□ 2.8
TRPM4Q8TD43 LINC01971-201ENST00000617888 1048 ntBASIC32.53■■■□□ 2.8
TRPM4Q8TD43 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
TRPM4Q8TD43 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRPM4Q8TD43 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
TRPM4Q8TD43 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.5■■■□□ 2.79
TRPM4Q8TD43 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TRPM4Q8TD43 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.49■■■□□ 2.79
TRPM4Q8TD43 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TRPM4Q8TD43 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.48■■■□□ 2.79
TRPM4Q8TD43 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRPM4Q8TD43 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TRPM4Q8TD43 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.46■■■□□ 2.79
TRPM4Q8TD43 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TRPM4Q8TD43 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
TRPM4Q8TD43 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.78
TRPM4Q8TD43 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRPM4Q8TD43 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRPM4Q8TD43 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRPM4Q8TD43 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.43■■■□□ 2.78
TRPM4Q8TD43 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
TRPM4Q8TD43 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRPM4Q8TD43 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
TRPM4Q8TD43 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
TRPM4Q8TD43 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRPM4Q8TD43 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRPM4Q8TD43 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRPM4Q8TD43 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.4■■■□□ 2.78
TRPM4Q8TD43 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRPM4Q8TD43 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
TRPM4Q8TD43 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
TRPM4Q8TD43 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
TRPM4Q8TD43 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
TRPM4Q8TD43 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
TRPM4Q8TD43 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
TRPM4Q8TD43 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
TRPM4Q8TD43 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
TRPM4Q8TD43 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
TRPM4Q8TD43 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
TRPM4Q8TD43 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
TRPM4Q8TD43 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
TRPM4Q8TD43 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.32■■■□□ 2.76
TRPM4Q8TD43 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.32■■■□□ 2.76
TRPM4Q8TD43 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.3■■■□□ 2.76
TRPM4Q8TD43 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.3■■■□□ 2.76
TRPM4Q8TD43 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.3■■■□□ 2.76
TRPM4Q8TD43 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.3■■■□□ 2.76
TRPM4Q8TD43 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TRPM4Q8TD43 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
TRPM4Q8TD43 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
TRPM4Q8TD43 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRPM4Q8TD43 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
TRPM4Q8TD43 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.26■■■□□ 2.75
TRPM4Q8TD43 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.26■■■□□ 2.75
TRPM4Q8TD43 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TRPM4Q8TD43 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TRPM4Q8TD43 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRPM4Q8TD43 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRPM4Q8TD43 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.25■■■□□ 2.75
TRPM4Q8TD43 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRPM4Q8TD43 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRPM4Q8TD43 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRPM4Q8TD43 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRPM4Q8TD43 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
TRPM4Q8TD43 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.21■■■□□ 2.75
TRPM4Q8TD43 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.2■■■□□ 2.75
TRPM4Q8TD43 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.2■■■□□ 2.75
TRPM4Q8TD43 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.2■■■□□ 2.75
TRPM4Q8TD43 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TRPM4Q8TD43 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.18■■■□□ 2.74
TRPM4Q8TD43 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.17■■■□□ 2.74
TRPM4Q8TD43 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
TRPM4Q8TD43 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L13-201ENST00000554103 1267 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L15-201ENST00000611059 1267 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L23-201ENST00000615195 1269 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L24-201ENST00000617576 1269 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L22-201ENST00000618238 1269 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L20-201ENST00000619712 1269 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L21-201ENST00000622058 1269 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L10-201ENST00000622460 1267 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 DUX4L25-201ENST00000624915 1269 ntBASIC32.16■■■□□ 2.74
TRPM4Q8TD43 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
TRPM4Q8TD43 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.15■■■□□ 2.74
TRPM4Q8TD43 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
TRPM4Q8TD43 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
TRPM4Q8TD43 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.14■■■□□ 2.74
TRPM4Q8TD43 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
TRPM4Q8TD43 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.13■■■□□ 2.73
TRPM4Q8TD43 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
TRPM4Q8TD43 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
TRPM4Q8TD43 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.09■■■□□ 2.73
TRPM4Q8TD43 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.08■■■□□ 2.73
TRPM4Q8TD43 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.07■■■□□ 2.72
TRPM4Q8TD43 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms