Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ST7-AS1-201ENST00000456775 1889 ntBASIC23.34■■□□□ 1.33
HIST2H3AQ71DI3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HIST2H3AQ71DI3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.33■■□□□ 1.32
HIST2H3AQ71DI3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HIST2H3AQ71DI3 AL135925.1-201ENST00000605920 1701 ntBASIC23.32■■□□□ 1.32
HIST2H3AQ71DI3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HIST2H3AQ71DI3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HIST2H3AQ71DI3 AL391121.1-201ENST00000607967 1349 ntBASIC23.31■■□□□ 1.32
HIST2H3AQ71DI3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HIST2H3AQ71DI3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HIST2H3AQ71DI3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HIST2H3AQ71DI3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.3■■□□□ 1.32
HIST2H3AQ71DI3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
HIST2H3AQ71DI3 CAHM-201ENST00000604200 896 ntBASIC23.3■■□□□ 1.32
HIST2H3AQ71DI3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
HIST2H3AQ71DI3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
HIST2H3AQ71DI3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HIST2H3AQ71DI3 AC097358.2-201ENST00000607541 1159 ntBASIC23.29■■□□□ 1.32
HIST2H3AQ71DI3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
HIST2H3AQ71DI3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HIST2H3AQ71DI3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
HIST2H3AQ71DI3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HIST2H3AQ71DI3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.27■■□□□ 1.32
HIST2H3AQ71DI3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HIST2H3AQ71DI3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HIST2H3AQ71DI3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HIST2H3AQ71DI3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
HIST2H3AQ71DI3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HIST2H3AQ71DI3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.25■■□□□ 1.31
HIST2H3AQ71DI3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HIST2H3AQ71DI3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HIST2H3AQ71DI3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HIST2H3AQ71DI3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HIST2H3AQ71DI3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HIST2H3AQ71DI3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.23■■□□□ 1.31
HIST2H3AQ71DI3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HIST2H3AQ71DI3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HIST2H3AQ71DI3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HIST2H3AQ71DI3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HIST2H3AQ71DI3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.22■■□□□ 1.31
HIST2H3AQ71DI3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
HIST2H3AQ71DI3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HIST2H3AQ71DI3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
HIST2H3AQ71DI3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
HIST2H3AQ71DI3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
HIST2H3AQ71DI3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
HIST2H3AQ71DI3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.2■■□□□ 1.3
HIST2H3AQ71DI3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
HIST2H3AQ71DI3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HIST2H3AQ71DI3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIST2H3AQ71DI3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.18■■□□□ 1.3
HIST2H3AQ71DI3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
HIST2H3AQ71DI3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIST2H3AQ71DI3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIST2H3AQ71DI3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIST2H3AQ71DI3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIST2H3AQ71DI3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.16■■□□□ 1.3
HIST2H3AQ71DI3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HIST2H3AQ71DI3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HIST2H3AQ71DI3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HIST2H3AQ71DI3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST2H3AQ71DI3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
HIST2H3AQ71DI3 ABCB10P3-201ENST00000561950 2166 ntBASIC23.13■■□□□ 1.29
HIST2H3AQ71DI3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIST2H3AQ71DI3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HIST2H3AQ71DI3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIST2H3AQ71DI3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.13■■□□□ 1.29
HIST2H3AQ71DI3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
HIST2H3AQ71DI3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HIST2H3AQ71DI3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIST2H3AQ71DI3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
HIST2H3AQ71DI3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.11■■□□□ 1.29
HIST2H3AQ71DI3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HIST2H3AQ71DI3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIST2H3AQ71DI3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIST2H3AQ71DI3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.1■■□□□ 1.29
HIST2H3AQ71DI3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIST2H3AQ71DI3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.1■■□□□ 1.29
HIST2H3AQ71DI3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HIST2H3AQ71DI3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIST2H3AQ71DI3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HIST2H3AQ71DI3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.09■■□□□ 1.29
HIST2H3AQ71DI3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.09■■□□□ 1.29
HIST2H3AQ71DI3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIST2H3AQ71DI3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HIST2H3AQ71DI3 AC010864.1-201ENST00000609407 1511 ntBASIC23.08■■□□□ 1.28
HIST2H3AQ71DI3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HIST2H3AQ71DI3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
HIST2H3AQ71DI3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.05■■□□□ 1.28
HIST2H3AQ71DI3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
HIST2H3AQ71DI3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
HIST2H3AQ71DI3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HIST2H3AQ71DI3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HIST2H3AQ71DI3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms