Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
TRIM60Q495X7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.04■■■□□ 2.4
TRIM60Q495X7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.03■■■□□ 2.4
TRIM60Q495X7 LINC01971-201ENST00000617888 1048 ntBASIC30.03■■■□□ 2.4
TRIM60Q495X7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
TRIM60Q495X7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.02■■■□□ 2.4
TRIM60Q495X7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM60Q495X7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
TRIM60Q495X7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM60Q495X7 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.99■■■□□ 2.39
TRIM60Q495X7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM60Q495X7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM60Q495X7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.98■■■□□ 2.39
TRIM60Q495X7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM60Q495X7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TRIM60Q495X7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
TRIM60Q495X7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM60Q495X7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM60Q495X7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.95■■■□□ 2.39
TRIM60Q495X7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TRIM60Q495X7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.94■■■□□ 2.38
TRIM60Q495X7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
TRIM60Q495X7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TRIM60Q495X7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM60Q495X7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM60Q495X7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
TRIM60Q495X7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
TRIM60Q495X7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
TRIM60Q495X7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
TRIM60Q495X7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM60Q495X7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM60Q495X7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM60Q495X7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM60Q495X7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM60Q495X7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.84■■■□□ 2.37
TRIM60Q495X7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM60Q495X7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM60Q495X7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.82■■■□□ 2.36
TRIM60Q495X7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.81■■■□□ 2.36
TRIM60Q495X7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM60Q495X7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.79■■■□□ 2.36
TRIM60Q495X7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM60Q495X7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TRIM60Q495X7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.78■■■□□ 2.36
TRIM60Q495X7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TRIM60Q495X7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
TRIM60Q495X7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TRIM60Q495X7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.77■■■□□ 2.36
TRIM60Q495X7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.77■■■□□ 2.36
TRIM60Q495X7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
TRIM60Q495X7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TRIM60Q495X7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.75■■■□□ 2.35
TRIM60Q495X7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.75■■■□□ 2.35
TRIM60Q495X7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM60Q495X7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.74■■■□□ 2.35
TRIM60Q495X7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.73■■■□□ 2.35
TRIM60Q495X7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM60Q495X7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM60Q495X7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.7■■■□□ 2.35
TRIM60Q495X7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.7■■■□□ 2.35
TRIM60Q495X7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM60Q495X7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.69■■■□□ 2.34
TRIM60Q495X7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L13-201ENST00000554103 1267 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L15-201ENST00000611059 1267 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L23-201ENST00000615195 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L24-201ENST00000617576 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L22-201ENST00000618238 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L20-201ENST00000619712 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L21-201ENST00000622058 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L10-201ENST00000622460 1267 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 DUX4L25-201ENST00000624915 1269 ntBASIC29.68■■■□□ 2.34
TRIM60Q495X7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM60Q495X7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM60Q495X7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM60Q495X7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM60Q495X7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.65■■■□□ 2.34
TRIM60Q495X7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.64■■■□□ 2.34
TRIM60Q495X7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRIM60Q495X7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
TRIM60Q495X7 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.62■■■□□ 2.33
TRIM60Q495X7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TRIM60Q495X7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.62■■■□□ 2.33
TRIM60Q495X7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TRIM60Q495X7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM60Q495X7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.6■■■□□ 2.33
TRIM60Q495X7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TRIM60Q495X7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRIM60Q495X7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.59■■■□□ 2.33
TRIM60Q495X7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRIM60Q495X7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.58■■■□□ 2.33
TRIM60Q495X7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.57■■■□□ 2.32
TRIM60Q495X7 RARRES2P2-201ENST00000394842 485 ntBASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms