Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.354e-6■■■□□ 17.7
HNRNPUQ00839 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.24e-6■■■□□ 17.7
HNRNPUQ00839 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.184e-6■■■□□ 17.7
HNRNPUQ00839 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.184e-6■■■□□ 17.7
HNRNPUQ00839 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.14e-6■■■□□ 17.7
HNRNPUQ00839 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.034e-6■■■□□ 17.7
HNRNPUQ00839 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.894e-6■■■□□ 17.7
HNRNPUQ00839 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC16.85■□□□□ 0.292e-6■■■□□ 17.7
HNRNPUQ00839 SMAD3-202ENST00000439724 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.172e-6■■■□□ 17.7
HNRNPUQ00839 SMAD3-205ENST00000558428 554 ntTSL 415.89■□□□□ 0.132e-6■■■□□ 17.7
HNRNPUQ00839 SMAD3-208ENST00000558827 552 ntTSL 415.78■□□□□ 0.122e-6■■■□□ 17.7
HNRNPUQ00839 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC10.82□□□□□ -0.682e-6■■■□□ 17.7
HNRNPUQ00839 SMAD3-209ENST00000558894 797 ntTSL 56.87□□□□□ -1.312e-6■■■□□ 17.7
HNRNPUQ00839 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.412e-10■■■□□ 17.6
HNRNPUQ00839 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.923e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.923e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-205ENST00000465559 677 ntTSL 320.01■□□□□ 0.793e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-210ENST00000474345 713 ntTSL 319.62■□□□□ 0.733e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.733e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-213ENST00000489003 976 ntTSL 219.62■□□□□ 0.733e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-208ENST00000470171 746 ntTSL 219.46■□□□□ 0.713e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-216ENST00000491013 912 ntTSL 518.64■□□□□ 0.573e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.53e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-207ENST00000468479 938 ntTSL 217.96■□□□□ 0.473e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-219ENST00000495308 808 ntTSL 217.53■□□□□ 0.43e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-204ENST00000461507 1022 ntTSL 216.27■□□□□ 0.23e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-211ENST00000477057 741 ntTSL 216.27■□□□□ 0.23e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.163e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC14.74□□□□□ -0.053e-6■■■□□ 17.5
HNRNPUQ00839 FDPS-209ENST00000471117 630 ntTSL 311.22□□□□□ -0.613e-6■■■□□ 17.5
HNRNPUQ00839 DCUN1D4-220ENST00000511675 643 ntTSL 231.6■■■□□ 2.657e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-222ENST00000513800 949 ntTSL 231.6■■■□□ 2.657e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-211ENST00000506673 548 ntTSL 431.6■■■□□ 2.657e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-213ENST00000507741 1584 ntTSL 231.4■■■□□ 2.627e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-205ENST00000502930 548 ntTSL 430.58■■■□□ 2.497e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-206ENST00000504113 594 ntTSL 428.94■■■□□ 2.227e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-216ENST00000509376 2293 ntTSL 228.6■■■□□ 2.177e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-209ENST00000505403 645 ntTSL 428.19■■■□□ 2.17e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-215ENST00000509068 805 ntTSL 326.7■■□□□ 1.867e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-224ENST00000581718 574 ntTSL 224.88■■□□□ 1.577e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-203ENST00000472367 794 ntTSL 322.84■■□□□ 1.257e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-212ENST00000483588 688 ntTSL 322.19■■□□□ 1.147e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC21.44■■□□□ 1.027e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-229ENST00000584177 574 ntTSL 421.37■■□□□ 1.017e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC19.89■□□□□ 0.777e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.657e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-207ENST00000478103 712 ntTSL 312.89□□□□□ -0.357e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-227ENST00000583400 712 ntTSL 412.64□□□□□ -0.397e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC12.54□□□□□ -0.47e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-222ENST00000580770 572 ntTSL 411.87□□□□□ -0.517e-6■■■□□ 17.4
HNRNPUQ00839 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC9.59□□□□□ -0.877e-6■■■□□ 17.4
HNRNPUQ00839 DCUN1D4-204ENST00000477560 4840 ntTSL 25.12□□□□□ -1.597e-6■■■□□ 17.4
HNRNPUQ00839 PITPNA-210ENST00000576722 793 ntTSL 334.91■■■■□ 3.181e-10■■■□□ 17.4
HNRNPUQ00839 PITPNA-207ENST00000575288 1264 ntTSL 234.64■■■■□ 3.141e-10■■■□□ 17.4
HNRNPUQ00839 PITPNA-209ENST00000576010 573 ntTSL 532.3■■■□□ 2.761e-10■■■□□ 17.4
HNRNPUQ00839 PITPNA-211ENST00000576761 589 ntTSL 432.24■■■□□ 2.751e-10■■■□□ 17.4
HNRNPUQ00839 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.451e-10■■■□□ 17.4
HNRNPUQ00839 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.211e-10■■■□□ 17.4
HNRNPUQ00839 PITPNA-205ENST00000573231 504 ntTSL 414.34□□□□□ -0.111e-10■■■□□ 17.4
HNRNPUQ00839 AGFG2-203ENST00000430857 915 ntTSL 532.21■■■□□ 2.754e-7■■■□□ 17.4
HNRNPUQ00839 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)26.46■■□□□ 1.834e-7■■■□□ 17.4
HNRNPUQ00839 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.784e-7■■■□□ 17.4
HNRNPUQ00839 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 329.69■■■□□ 2.346e-6■■■□□ 17.1
HNRNPUQ00839 NOL4L-209ENST00000485364 885 ntTSL 1 (best)29.65■■■□□ 2.346e-6■■■□□ 17.1
HNRNPUQ00839 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.286e-6■■■□□ 17.1
HNRNPUQ00839 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.46■□□□□ 0.716e-6■■■□□ 17.1
HNRNPUQ00839 AC011450.1-201ENST00000602554 511 ntTSL 210.87□□□□□ -0.676e-6■■■□□ 17.1
HNRNPUQ00839 NFE2L2-205ENST00000430047 451 ntTSL 330.23■■■□□ 2.431e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-203ENST00000421929 979 ntTSL 1 (best)25.17■■□□□ 1.621e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC21.8■■□□□ 1.081e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC20.13■□□□□ 0.811e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-210ENST00000462023 521 ntTSL 219.55■□□□□ 0.721e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-207ENST00000448782 975 ntTSL 1 (best)15.17■□□□□ 0.021e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC14.87□□□□□ -0.031e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-214ENST00000588123 814 ntTSL 512.09□□□□□ -0.471e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-212ENST00000477534 930 ntTSL 1 (best)8.4□□□□□ -1.061e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-208ENST00000449627 909 ntTSL 48.32□□□□□ -1.081e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.091e-9■■■□□ 17
HNRNPUQ00839 NFE2L2-213ENST00000586532 942 ntTSL 57.63□□□□□ -1.191e-9■■■□□ 17
HNRNPUQ00839 RALY-205ENST00000442805 871 ntTSL 530.67■■■□□ 2.57e-6■■■□□ 16.9
HNRNPUQ00839 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.82□□□□□ -1.483e-14■■■□□ 16.8
HNRNPUQ00839 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC12.17□□□□□ -0.462e-6■■■□□ 16.8
HNRNPUQ00839 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC9.46□□□□□ -0.92e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC28.74■■■□□ 2.192e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-203ENST00000372121 848 ntTSL 520.17■□□□□ 0.822e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-209ENST00000468915 1597 ntTSL 519.61■□□□□ 0.732e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.02■□□□□ 0.482e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.242e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC14.36□□□□□ -0.112e-6■■■□□ 16.8
HNRNPUQ00839 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC10.22□□□□□ -0.772e-6■■■□□ 16.8
HNRNPUQ00839 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC27.27■■□□□ 1.963e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC25.41■■□□□ 1.663e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC23.89■■□□□ 1.423e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC22.79■■□□□ 1.243e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC13.03□□□□□ -0.323e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-211ENST00000427603 526 ntTSL 412.4□□□□□ -0.423e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC11.52□□□□□ -0.573e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC11.48□□□□□ -0.573e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.583e-6■■■□□ 16.7
Retrieved 100 of 2,288 protein–RNA pairs in 21.5 ms