RNA–Protein interactions for RNA: ENST00000393844.5

SLC29A1-208, Transcript of solute carrier family 29 member 1 (Augustine blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC29A1, Length 2,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A1-208ENST00000393844 NISCHQ9Y2I1 1504 aa36.62■■■■□ 3.45
SLC29A1-208ENST00000393844 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
SLC29A1-208ENST00000393844 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
SLC29A1-208ENST00000393844 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
SLC29A1-208ENST00000393844 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
SLC29A1-208ENST00000393844 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
SLC29A1-208ENST00000393844 ABCC9O60706 1549 aa29.79■■■□□ 2.36
SLC29A1-208ENST00000393844 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
SLC29A1-208ENST00000393844 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
SLC29A1-208ENST00000393844 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
SLC29A1-208ENST00000393844 NACADO15069 1562 aa29.26■■■□□ 2.28
SLC29A1-208ENST00000393844 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
SLC29A1-208ENST00000393844 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
SLC29A1-208ENST00000393844 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
SLC29A1-208ENST00000393844 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
SLC29A1-208ENST00000393844 UNC13AQ9UPW8 1703 aa28.62■■■□□ 2.17
SLC29A1-208ENST00000393844 MROH2BQ7Z745 1585 aa28.46■■■□□ 2.15
SLC29A1-208ENST00000393844 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
SLC29A1-208ENST00000393844 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
SLC29A1-208ENST00000393844 WIZO95785 1651 aa28.28■■■□□ 2.12
SLC29A1-208ENST00000393844 HRCP23327 699 aa28.21■■■□□ 2.11
SLC29A1-208ENST00000393844 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
SLC29A1-208ENST00000393844 SMARCA4P51532 1647 aa28.06■■■□□ 2.08
SLC29A1-208ENST00000393844 TOP2AP11388 1531 aaKnown RBP27.78■■■□□ 2.04
SLC29A1-208ENST00000393844 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
SLC29A1-208ENST00000393844 PPARGC1BQ86YN6 1023 aaKnown RBP27.67■■■□□ 2.02
SLC29A1-208ENST00000393844 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
SLC29A1-208ENST00000393844 SMARCA2P51531 1590 aa27.64■■■□□ 2.02
SLC29A1-208ENST00000393844 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
SLC29A1-208ENST00000393844 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
SLC29A1-208ENST00000393844 PCGF6Q9BYE7 350 aa27.58■■■□□ 2.01
SLC29A1-208ENST00000393844 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
SLC29A1-208ENST00000393844 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
SLC29A1-208ENST00000393844 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
SLC29A1-208ENST00000393844 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
SLC29A1-208ENST00000393844 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
SLC29A1-208ENST00000393844 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
SLC29A1-208ENST00000393844 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
SLC29A1-208ENST00000393844 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
SLC29A1-208ENST00000393844 PELP1Q8IZL8 1130 aaKnown RBP27.06■■□□□ 1.92
SLC29A1-208ENST00000393844 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
SLC29A1-208ENST00000393844 SOGA1O94964 1423 aa26.93■■□□□ 1.9
SLC29A1-208ENST00000393844 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
SLC29A1-208ENST00000393844 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
SLC29A1-208ENST00000393844 RUSC2Q8N2Y8 1516 aa26.88■■□□□ 1.89
SLC29A1-208ENST00000393844 CC2D2AQ9P2K1 1620 aa26.86■■□□□ 1.89
SLC29A1-208ENST00000393844 EEA1Q15075 1411 aa26.81■■□□□ 1.88
SLC29A1-208ENST00000393844 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
SLC29A1-208ENST00000393844 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
SLC29A1-208ENST00000393844 CFTRP13569 1480 aa26.68■■□□□ 1.86
SLC29A1-208ENST00000393844 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
SLC29A1-208ENST00000393844 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
SLC29A1-208ENST00000393844 TNIKQ9UKE5 1360 aa26.59■■□□□ 1.85
SLC29A1-208ENST00000393844 CUX1P39880 1505 aa26.54■■□□□ 1.84
SLC29A1-208ENST00000393844 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
SLC29A1-208ENST00000393844 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
SLC29A1-208ENST00000393844 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
SLC29A1-208ENST00000393844 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
SLC29A1-208ENST00000393844 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
SLC29A1-208ENST00000393844 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
SLC29A1-208ENST00000393844 KIF21BO75037 1637 aa26.45■■□□□ 1.82
SLC29A1-208ENST00000393844 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
SLC29A1-208ENST00000393844 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
SLC29A1-208ENST00000393844 NESP48681 1621 aa26.36■■□□□ 1.81
SLC29A1-208ENST00000393844 RAPGEF2Q9Y4G8 1499 aa26.31■■□□□ 1.8
SLC29A1-208ENST00000393844 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
SLC29A1-208ENST00000393844 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
SLC29A1-208ENST00000393844 PRXQ9BXM0 1461 aa26.13■■□□□ 1.77
SLC29A1-208ENST00000393844 KIF27Q86VH2 1401 aa26.13■■□□□ 1.77
SLC29A1-208ENST00000393844 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
SLC29A1-208ENST00000393844 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
SLC29A1-208ENST00000393844 CLIP1P30622 1438 aa26.09■■□□□ 1.77
SLC29A1-208ENST00000393844 CUX2O14529 1486 aa26.08■■□□□ 1.76
SLC29A1-208ENST00000393844 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
SLC29A1-208ENST00000393844 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
SLC29A1-208ENST00000393844 VPS8Q8N3P4 1428 aa26.02■■□□□ 1.76
SLC29A1-208ENST00000393844 TOPBP1Q92547 1522 aa26.01■■□□□ 1.76
SLC29A1-208ENST00000393844 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
SLC29A1-208ENST00000393844 ACIN1Q9UKV3 1341 aaKnown RBP26■■□□□ 1.75
SLC29A1-208ENST00000393844 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
SLC29A1-208ENST00000393844 CCER1Q8TC90 406 aaPredicted RBP26■■□□□ 1.75
SLC29A1-208ENST00000393844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
SLC29A1-208ENST00000393844 NEUROD1Q13562 356 aa25.97■■□□□ 1.75
SLC29A1-208ENST00000393844 IGF1RP08069 1367 aa25.97■■□□□ 1.75
SLC29A1-208ENST00000393844 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
SLC29A1-208ENST00000393844 URB2Q14146 1524 aaKnown RBP25.96■■□□□ 1.75
SLC29A1-208ENST00000393844 MYT1Q01538 1121 aa25.94■■□□□ 1.74
SLC29A1-208ENST00000393844 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
SLC29A1-208ENST00000393844 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
SLC29A1-208ENST00000393844 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.72
SLC29A1-208ENST00000393844 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
SLC29A1-208ENST00000393844 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
SLC29A1-208ENST00000393844 GTF3C3Q9Y5Q9 886 aa25.78■■□□□ 1.72
SLC29A1-208ENST00000393844 APLP2Q06481 763 aa25.77■■□□□ 1.72
SLC29A1-208ENST00000393844 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
SLC29A1-208ENST00000393844 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
SLC29A1-208ENST00000393844 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.7
SLC29A1-208ENST00000393844 ABCA5Q8WWZ7 1642 aa25.61■■□□□ 1.69
SLC29A1-208ENST00000393844 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
SLC29A1-208ENST00000393844 CENPBP07199 599 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms