Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC14.43□□□□□ -0.1
SEC61BP60468 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEC61BP60468 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61BP60468 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC14.42□□□□□ -0.1
SEC61BP60468 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61BP60468 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61BP60468 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61BP60468 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC61BP60468 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61BP60468 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61BP60468 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC61BP60468 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SEC61BP60468 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61BP60468 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61BP60468 AC021231.2-201ENST00000594613 730 ntBASIC14.39□□□□□ -0.11
SEC61BP60468 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SEC61BP60468 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61BP60468 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61BP60468 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61BP60468 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61BP60468 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC61BP60468 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SEC61BP60468 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC61BP60468 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC61BP60468 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
SEC61BP60468 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61BP60468 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC61BP60468 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61BP60468 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC61BP60468 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61BP60468 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61BP60468 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61BP60468 AGPS-202ENST00000409888 815 ntTSL 4 BASIC14.34□□□□□ -0.11
SEC61BP60468 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61BP60468 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.34□□□□□ -0.11
SEC61BP60468 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61BP60468 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC61BP60468 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC14.33□□□□□ -0.12
SEC61BP60468 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61BP60468 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SEC61BP60468 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61BP60468 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61BP60468 RNF166-209ENST00000567844 633 ntTSL 5 BASIC14.31□□□□□ -0.12
SEC61BP60468 LINC01971-201ENST00000617888 1048 ntBASIC14.31□□□□□ -0.12
SEC61BP60468 MIR6090-201ENST00000622481 60 ntBASIC14.31□□□□□ -0.12
SEC61BP60468 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61BP60468 MIR639-201ENST00000384974 98 ntBASIC14.3□□□□□ -0.12
SEC61BP60468 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61BP60468 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61BP60468 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61BP60468 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SEC61BP60468 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61BP60468 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC14.29□□□□□ -0.12
SEC61BP60468 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61BP60468 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEC61BP60468 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61BP60468 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61BP60468 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC14.27□□□□□ -0.13
SEC61BP60468 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC14.27□□□□□ -0.13
SEC61BP60468 MIR4449-201ENST00000578365 66 ntBASIC14.27□□□□□ -0.13
SEC61BP60468 CALM3-209ENST00000597743 577 ntTSL 4 BASIC14.27□□□□□ -0.13
SEC61BP60468 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61BP60468 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61BP60468 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61BP60468 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61BP60468 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61BP60468 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61BP60468 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
SEC61BP60468 DUX4L11-201ENST00000611504 1267 ntBASIC14.26□□□□□ -0.13
SEC61BP60468 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61BP60468 DUX4L12-201ENST00000614593 1267 ntBASIC14.26□□□□□ -0.13
SEC61BP60468 DUX4L14-201ENST00000621227 1267 ntBASIC14.26□□□□□ -0.13
SEC61BP60468 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.26□□□□□ -0.13
SEC61BP60468 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61BP60468 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61BP60468 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SEC61BP60468 MIR3648-2-201ENST00000581792 180 ntBASIC14.25□□□□□ -0.13
SEC61BP60468 MIR3648-1-201ENST00000615959 180 ntBASIC14.25□□□□□ -0.13
SEC61BP60468 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61BP60468 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC61BP60468 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61BP60468 AC016575.1-201ENST00000607026 382 ntBASIC14.24□□□□□ -0.13
SEC61BP60468 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61BP60468 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61BP60468 EI24-212ENST00000615917 1407 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC61BP60468 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC61BP60468 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61BP60468 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61BP60468 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61BP60468 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEC61BP60468 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61BP60468 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61BP60468 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61BP60468 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61BP60468 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
SEC61BP60468 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SEC61BP60468 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61BP60468 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.21□□□□□ -0.13
SEC61BP60468 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.21□□□□□ -0.13
SEC61BP60468 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms