Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
PBX3P40426 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PBX3P40426 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.94■■■□□ 2.22
PBX3P40426 MIR6090-201ENST00000622481 60 ntBASIC28.94■■■□□ 2.22
PBX3P40426 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PBX3P40426 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.93■■■□□ 2.22
PBX3P40426 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
PBX3P40426 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PBX3P40426 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PBX3P40426 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PBX3P40426 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PBX3P40426 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.91■■■□□ 2.22
PBX3P40426 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.91■■■□□ 2.22
PBX3P40426 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PBX3P40426 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.91■■■□□ 2.22
PBX3P40426 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
PBX3P40426 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PBX3P40426 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PBX3P40426 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PBX3P40426 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PBX3P40426 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PBX3P40426 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PBX3P40426 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PBX3P40426 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PBX3P40426 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PBX3P40426 AC108673.1-201ENST00000510422 1159 ntBASIC28.83■■■□□ 2.21
PBX3P40426 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PBX3P40426 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PBX3P40426 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PBX3P40426 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
PBX3P40426 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.79■■■□□ 2.2
PBX3P40426 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.79■■■□□ 2.2
PBX3P40426 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PBX3P40426 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.78■■■□□ 2.2
PBX3P40426 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PBX3P40426 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.77■■■□□ 2.2
PBX3P40426 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PBX3P40426 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PBX3P40426 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
PBX3P40426 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
PBX3P40426 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.75■■■□□ 2.19
PBX3P40426 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.75■■■□□ 2.19
PBX3P40426 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
PBX3P40426 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PBX3P40426 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PBX3P40426 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.74■■■□□ 2.19
PBX3P40426 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PBX3P40426 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PBX3P40426 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PBX3P40426 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.72■■■□□ 2.19
PBX3P40426 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PBX3P40426 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.71■■■□□ 2.19
PBX3P40426 AC120057.4-201ENST00000624722 1615 ntBASIC28.71■■■□□ 2.19
PBX3P40426 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
PBX3P40426 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.7■■■□□ 2.19
PBX3P40426 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PBX3P40426 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.69■■■□□ 2.18
PBX3P40426 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PBX3P40426 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
PBX3P40426 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.68■■■□□ 2.18
PBX3P40426 AC016575.1-201ENST00000607026 382 ntBASIC28.68■■■□□ 2.18
PBX3P40426 MIR639-201ENST00000384974 98 ntBASIC28.67■■■□□ 2.18
PBX3P40426 MIR4449-201ENST00000578365 66 ntBASIC28.67■■■□□ 2.18
PBX3P40426 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PBX3P40426 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PBX3P40426 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PBX3P40426 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
PBX3P40426 MIR3648-2-201ENST00000581792 180 ntBASIC28.65■■■□□ 2.18
PBX3P40426 MIR3648-1-201ENST00000615959 180 ntBASIC28.65■■■□□ 2.18
PBX3P40426 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PBX3P40426 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.64■■■□□ 2.18
PBX3P40426 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
PBX3P40426 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PBX3P40426 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PBX3P40426 DUX4L11-201ENST00000611504 1267 ntBASIC28.62■■■□□ 2.17
PBX3P40426 DUX4L12-201ENST00000614593 1267 ntBASIC28.62■■■□□ 2.17
PBX3P40426 DUX4L14-201ENST00000621227 1267 ntBASIC28.62■■■□□ 2.17
PBX3P40426 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.62■■■□□ 2.17
PBX3P40426 CR559946.2-201ENST00000623684 991 ntBASIC28.6■■■□□ 2.17
PBX3P40426 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.59■■■□□ 2.17
PBX3P40426 LINC01971-201ENST00000617888 1048 ntBASIC28.59■■■□□ 2.17
PBX3P40426 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
PBX3P40426 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.57■■■□□ 2.16
PBX3P40426 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PBX3P40426 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.56■■■□□ 2.16
PBX3P40426 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
PBX3P40426 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
PBX3P40426 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PBX3P40426 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
PBX3P40426 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.54■■■□□ 2.16
PBX3P40426 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PBX3P40426 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.53■■■□□ 2.16
PBX3P40426 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
PBX3P40426 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.52■■■□□ 2.16
PBX3P40426 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
PBX3P40426 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
PBX3P40426 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PBX3P40426 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
PBX3P40426 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PBX3P40426 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms