Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
NPHS1O60500 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPHS1O60500 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPHS1O60500 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NPHS1O60500 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPHS1O60500 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.09■■□□□ 1.77
NPHS1O60500 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPHS1O60500 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.08■■□□□ 1.77
NPHS1O60500 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
NPHS1O60500 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
NPHS1O60500 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
NPHS1O60500 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
NPHS1O60500 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NPHS1O60500 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
NPHS1O60500 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NPHS1O60500 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NPHS1O60500 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.03■■□□□ 1.76
NPHS1O60500 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NPHS1O60500 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
NPHS1O60500 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.98■■□□□ 1.75
NPHS1O60500 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPHS1O60500 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPHS1O60500 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NPHS1O60500 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
NPHS1O60500 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPHS1O60500 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPHS1O60500 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPHS1O60500 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NPHS1O60500 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.94■■□□□ 1.74
NPHS1O60500 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
NPHS1O60500 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NPHS1O60500 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NPHS1O60500 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NPHS1O60500 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.92■■□□□ 1.74
NPHS1O60500 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NPHS1O60500 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.91■■□□□ 1.74
NPHS1O60500 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NPHS1O60500 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NPHS1O60500 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NPHS1O60500 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
NPHS1O60500 WASH5P-204ENST00000632292 975 ntBASIC25.89■■□□□ 1.74
NPHS1O60500 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NPHS1O60500 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
NPHS1O60500 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
NPHS1O60500 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
NPHS1O60500 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NPHS1O60500 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.87■■□□□ 1.73
NPHS1O60500 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.87■■□□□ 1.73
NPHS1O60500 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
NPHS1O60500 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.86■■□□□ 1.73
NPHS1O60500 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NPHS1O60500 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
NPHS1O60500 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NPHS1O60500 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.86■■□□□ 1.73
NPHS1O60500 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.85■■□□□ 1.73
NPHS1O60500 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NPHS1O60500 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NPHS1O60500 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NPHS1O60500 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NPHS1O60500 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NPHS1O60500 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.84■■□□□ 1.73
NPHS1O60500 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NPHS1O60500 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.83■■□□□ 1.73
NPHS1O60500 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
NPHS1O60500 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.83■■□□□ 1.73
NPHS1O60500 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NPHS1O60500 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NPHS1O60500 AC142086.6-201ENST00000621154 1765 ntBASIC25.82■■□□□ 1.72
NPHS1O60500 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.82■■□□□ 1.72
NPHS1O60500 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NPHS1O60500 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NPHS1O60500 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
NPHS1O60500 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHS1O60500 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHS1O60500 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NPHS1O60500 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHS1O60500 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHS1O60500 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NPHS1O60500 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHS1O60500 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
NPHS1O60500 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHS1O60500 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.77■■□□□ 1.72
NPHS1O60500 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NPHS1O60500 AL139393.2-201ENST00000608721 2025 ntBASIC25.76■■□□□ 1.72
NPHS1O60500 AL133380.1-201ENST00000506013 324 ntBASIC25.75■■□□□ 1.71
NPHS1O60500 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.75■■□□□ 1.71
NPHS1O60500 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.74■■□□□ 1.71
NPHS1O60500 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.73■■□□□ 1.71
NPHS1O60500 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.73■■□□□ 1.71
NPHS1O60500 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NPHS1O60500 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NPHS1O60500 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
NPHS1O60500 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NPHS1O60500 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NPHS1O60500 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NPHS1O60500 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NPHS1O60500 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NPHS1O60500 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NPHS1O60500 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NPHS1O60500 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms