Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.52■■□□□ 1.84
CDX4O14627 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.51■■□□□ 1.83
CDX4O14627 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDX4O14627 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.5■■□□□ 1.83
CDX4O14627 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDX4O14627 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CDX4O14627 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.49■■□□□ 1.83
CDX4O14627 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDX4O14627 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDX4O14627 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CDX4O14627 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDX4O14627 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
CDX4O14627 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDX4O14627 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.46■■□□□ 1.83
CDX4O14627 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDX4O14627 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDX4O14627 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDX4O14627 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CDX4O14627 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CDX4O14627 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.43■■□□□ 1.82
CDX4O14627 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDX4O14627 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CDX4O14627 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDX4O14627 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDX4O14627 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.41■■□□□ 1.82
CDX4O14627 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CDX4O14627 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDX4O14627 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDX4O14627 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CDX4O14627 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDX4O14627 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDX4O14627 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.37■■□□□ 1.81
CDX4O14627 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDX4O14627 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CDX4O14627 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDX4O14627 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.36■■□□□ 1.81
CDX4O14627 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDX4O14627 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDX4O14627 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDX4O14627 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.34■■□□□ 1.81
CDX4O14627 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDX4O14627 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDX4O14627 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDX4O14627 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.32■■□□□ 1.8
CDX4O14627 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDX4O14627 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDX4O14627 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.3■■□□□ 1.8
CDX4O14627 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.3■■□□□ 1.8
CDX4O14627 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDX4O14627 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.29■■□□□ 1.8
CDX4O14627 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDX4O14627 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDX4O14627 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDX4O14627 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.29■■□□□ 1.8
CDX4O14627 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDX4O14627 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDX4O14627 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.27■■□□□ 1.8
CDX4O14627 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDX4O14627 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.26■■□□□ 1.79
CDX4O14627 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.26■■□□□ 1.79
CDX4O14627 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDX4O14627 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.24■■□□□ 1.79
CDX4O14627 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.24■■□□□ 1.79
CDX4O14627 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDX4O14627 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L13-201ENST00000554103 1267 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L15-201ENST00000611059 1267 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L23-201ENST00000615195 1269 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L24-201ENST00000617576 1269 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L22-201ENST00000618238 1269 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L20-201ENST00000619712 1269 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L21-201ENST00000622058 1269 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L10-201ENST00000622460 1267 ntBASIC26.23■■□□□ 1.79
CDX4O14627 DUX4L25-201ENST00000624915 1269 ntBASIC26.23■■□□□ 1.79
CDX4O14627 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDX4O14627 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDX4O14627 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CDX4O14627 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.2■■□□□ 1.78
CDX4O14627 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDX4O14627 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.19■■□□□ 1.78
CDX4O14627 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDX4O14627 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDX4O14627 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDX4O14627 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.18■■□□□ 1.78
CDX4O14627 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CDX4O14627 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDX4O14627 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.17■■□□□ 1.78
CDX4O14627 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDX4O14627 RARRES2P2-201ENST00000394842 485 ntBASIC26.14■■□□□ 1.78
CDX4O14627 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDX4O14627 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.13■■□□□ 1.77
CDX4O14627 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.13■■□□□ 1.77
CDX4O14627 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDX4O14627 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.12■■□□□ 1.77
CDX4O14627 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CDX4O14627 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.12■■□□□ 1.77
CDX4O14627 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDX4O14627 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.11■■□□□ 1.77
CDX4O14627 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.11■■□□□ 1.77
CDX4O14627 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms