Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRGV8A0A0C4DH27 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRGV8A0A0C4DH27 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
TRGV8A0A0C4DH27 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.03■■□□□ 1.44
TRGV8A0A0C4DH27 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRGV8A0A0C4DH27 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TRGV8A0A0C4DH27 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRGV8A0A0C4DH27 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRGV8A0A0C4DH27 AC016575.1-201ENST00000607026 382 ntBASIC24.01■■□□□ 1.43
TRGV8A0A0C4DH27 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24■■□□□ 1.43
TRGV8A0A0C4DH27 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24■■□□□ 1.43
TRGV8A0A0C4DH27 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 MIR3648-2-201ENST00000581792 180 ntBASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 MIR3648-1-201ENST00000615959 180 ntBASIC23.99■■□□□ 1.43
TRGV8A0A0C4DH27 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.98■■□□□ 1.43
TRGV8A0A0C4DH27 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRGV8A0A0C4DH27 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TRGV8A0A0C4DH27 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.97■■□□□ 1.43
TRGV8A0A0C4DH27 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRGV8A0A0C4DH27 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRGV8A0A0C4DH27 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.95■■□□□ 1.42
TRGV8A0A0C4DH27 DUX4L11-201ENST00000611504 1267 ntBASIC23.95■■□□□ 1.42
TRGV8A0A0C4DH27 DUX4L12-201ENST00000614593 1267 ntBASIC23.95■■□□□ 1.42
TRGV8A0A0C4DH27 DUX4L14-201ENST00000621227 1267 ntBASIC23.95■■□□□ 1.42
TRGV8A0A0C4DH27 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRGV8A0A0C4DH27 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.94■■□□□ 1.42
TRGV8A0A0C4DH27 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRGV8A0A0C4DH27 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRGV8A0A0C4DH27 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRGV8A0A0C4DH27 LINC01971-201ENST00000617888 1048 ntBASIC23.93■■□□□ 1.42
TRGV8A0A0C4DH27 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.92■■□□□ 1.42
TRGV8A0A0C4DH27 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRGV8A0A0C4DH27 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRGV8A0A0C4DH27 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRGV8A0A0C4DH27 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.9■■□□□ 1.42
TRGV8A0A0C4DH27 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.9■■□□□ 1.42
TRGV8A0A0C4DH27 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRGV8A0A0C4DH27 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRGV8A0A0C4DH27 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRGV8A0A0C4DH27 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRGV8A0A0C4DH27 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRGV8A0A0C4DH27 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRGV8A0A0C4DH27 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRGV8A0A0C4DH27 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRGV8A0A0C4DH27 CR559946.2-201ENST00000623684 991 ntBASIC23.88■■□□□ 1.41
TRGV8A0A0C4DH27 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV8A0A0C4DH27 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TRGV8A0A0C4DH27 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
TRGV8A0A0C4DH27 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRGV8A0A0C4DH27 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.86■■□□□ 1.41
TRGV8A0A0C4DH27 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.86■■□□□ 1.41
TRGV8A0A0C4DH27 HSD17B1P1-201ENST00000590052 955 ntBASIC23.85■■□□□ 1.41
TRGV8A0A0C4DH27 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.84■■□□□ 1.41
TRGV8A0A0C4DH27 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.84■■□□□ 1.41
TRGV8A0A0C4DH27 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TRGV8A0A0C4DH27 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRGV8A0A0C4DH27 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRGV8A0A0C4DH27 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRGV8A0A0C4DH27 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRGV8A0A0C4DH27 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.81■■□□□ 1.4
TRGV8A0A0C4DH27 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.81■■□□□ 1.4
TRGV8A0A0C4DH27 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.81■■□□□ 1.4
TRGV8A0A0C4DH27 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRGV8A0A0C4DH27 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.8■■□□□ 1.4
TRGV8A0A0C4DH27 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.8■■□□□ 1.4
TRGV8A0A0C4DH27 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRGV8A0A0C4DH27 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRGV8A0A0C4DH27 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.78■■□□□ 1.4
TRGV8A0A0C4DH27 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRGV8A0A0C4DH27 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRGV8A0A0C4DH27 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRGV8A0A0C4DH27 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRGV8A0A0C4DH27 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.76■■□□□ 1.39
TRGV8A0A0C4DH27 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRGV8A0A0C4DH27 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TRGV8A0A0C4DH27 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRGV8A0A0C4DH27 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRGV8A0A0C4DH27 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRGV8A0A0C4DH27 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRGV8A0A0C4DH27 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRGV8A0A0C4DH27 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRGV8A0A0C4DH27 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRGV8A0A0C4DH27 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRGV8A0A0C4DH27 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRGV8A0A0C4DH27 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
TRGV8A0A0C4DH27 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.71■■□□□ 1.39
TRGV8A0A0C4DH27 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRGV8A0A0C4DH27 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRGV8A0A0C4DH27 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.7■■□□□ 1.38
TRGV8A0A0C4DH27 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.7■■□□□ 1.38
TRGV8A0A0C4DH27 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TRGV8A0A0C4DH27 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.69■■□□□ 1.38
TRGV8A0A0C4DH27 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRGV8A0A0C4DH27 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms