Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBV7-1A0A0A6YYK4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV7-1A0A0A6YYK4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV7-1A0A0A6YYK4 CAHM-201ENST00000604200 896 ntBASIC20.69■□□□□ 0.9
TRBV7-1A0A0A6YYK4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV7-1A0A0A6YYK4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV7-1A0A0A6YYK4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV7-1A0A0A6YYK4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV7-1A0A0A6YYK4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRBV7-1A0A0A6YYK4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV7-1A0A0A6YYK4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV7-1A0A0A6YYK4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV7-1A0A0A6YYK4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV7-1A0A0A6YYK4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV7-1A0A0A6YYK4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRBV7-1A0A0A6YYK4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV7-1A0A0A6YYK4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.64■□□□□ 0.9
TRBV7-1A0A0A6YYK4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV7-1A0A0A6YYK4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRBV7-1A0A0A6YYK4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV7-1A0A0A6YYK4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRBV7-1A0A0A6YYK4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRBV7-1A0A0A6YYK4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.63■□□□□ 0.89
TRBV7-1A0A0A6YYK4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV7-1A0A0A6YYK4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV7-1A0A0A6YYK4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV7-1A0A0A6YYK4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV7-1A0A0A6YYK4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV7-1A0A0A6YYK4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV7-1A0A0A6YYK4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.6■□□□□ 0.89
TRBV7-1A0A0A6YYK4 AL135925.1-201ENST00000605920 1701 ntBASIC20.6■□□□□ 0.89
TRBV7-1A0A0A6YYK4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV7-1A0A0A6YYK4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV7-1A0A0A6YYK4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV7-1A0A0A6YYK4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRBV7-1A0A0A6YYK4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV7-1A0A0A6YYK4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV7-1A0A0A6YYK4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV7-1A0A0A6YYK4 ST7-AS1-201ENST00000456775 1889 ntBASIC20.57■□□□□ 0.88
TRBV7-1A0A0A6YYK4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV7-1A0A0A6YYK4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV7-1A0A0A6YYK4 ABCB10P1-201ENST00000614297 2181 ntBASIC20.57■□□□□ 0.88
TRBV7-1A0A0A6YYK4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV7-1A0A0A6YYK4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRBV7-1A0A0A6YYK4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV7-1A0A0A6YYK4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV7-1A0A0A6YYK4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV7-1A0A0A6YYK4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRBV7-1A0A0A6YYK4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
TRBV7-1A0A0A6YYK4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV7-1A0A0A6YYK4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV7-1A0A0A6YYK4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV7-1A0A0A6YYK4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.53■□□□□ 0.88
TRBV7-1A0A0A6YYK4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV7-1A0A0A6YYK4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV7-1A0A0A6YYK4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV7-1A0A0A6YYK4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV7-1A0A0A6YYK4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV7-1A0A0A6YYK4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 SUZ12P1-203ENST00000578195 985 ntBASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-1A0A0A6YYK4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV7-1A0A0A6YYK4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV7-1A0A0A6YYK4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV7-1A0A0A6YYK4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.5■□□□□ 0.87
TRBV7-1A0A0A6YYK4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV7-1A0A0A6YYK4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
TRBV7-1A0A0A6YYK4 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.49■□□□□ 0.87
TRBV7-1A0A0A6YYK4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV7-1A0A0A6YYK4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV7-1A0A0A6YYK4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRBV7-1A0A0A6YYK4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRBV7-1A0A0A6YYK4 MIR762-201ENST00000390236 83 ntBASIC20.47■□□□□ 0.87
TRBV7-1A0A0A6YYK4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV7-1A0A0A6YYK4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV7-1A0A0A6YYK4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.46■□□□□ 0.87
TRBV7-1A0A0A6YYK4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRBV7-1A0A0A6YYK4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.46■□□□□ 0.87
TRBV7-1A0A0A6YYK4 AC010864.1-201ENST00000609407 1511 ntBASIC20.45■□□□□ 0.86
TRBV7-1A0A0A6YYK4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV7-1A0A0A6YYK4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV7-1A0A0A6YYK4 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.45■□□□□ 0.86
TRBV7-1A0A0A6YYK4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV7-1A0A0A6YYK4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRBV7-1A0A0A6YYK4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV7-1A0A0A6YYK4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV7-1A0A0A6YYK4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV7-1A0A0A6YYK4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.43■□□□□ 0.86
TRBV7-1A0A0A6YYK4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRBV7-1A0A0A6YYK4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV7-1A0A0A6YYK4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV7-1A0A0A6YYK4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRBV7-1A0A0A6YYK4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV7-1A0A0A6YYK4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV7-1A0A0A6YYK4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms