Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC004854.2-201ENST00000608450 1441 ntBASIC18.35■□□□□ 0.53
CDH20Q9HBT6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 KRT19P1-201ENST00000405746 1186 ntBASIC18.34■□□□□ 0.53
CDH20Q9HBT6 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.34■□□□□ 0.53
CDH20Q9HBT6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 AL162430.1-201ENST00000480705 870 ntBASIC18.34■□□□□ 0.53
CDH20Q9HBT6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 AC053503.5-201ENST00000601508 636 ntBASIC18.34■□□□□ 0.53
CDH20Q9HBT6 AC104187.1-201ENST00000607510 612 ntBASIC18.34■□□□□ 0.53
CDH20Q9HBT6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH20Q9HBT6 AP004607.4-201ENST00000530158 1459 ntBASIC18.33■□□□□ 0.53
CDH20Q9HBT6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH20Q9HBT6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.33■□□□□ 0.53
CDH20Q9HBT6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.33■□□□□ 0.53
CDH20Q9HBT6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 KRT18P5-201ENST00000436075 1291 ntBASIC18.33■□□□□ 0.52
CDH20Q9HBT6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 EEF1DP3-203ENST00000566025 782 ntBASIC18.33■□□□□ 0.52
CDH20Q9HBT6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDH20Q9HBT6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH20Q9HBT6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 AC008175.2-201ENST00000612840 297 ntBASIC18.31■□□□□ 0.52
CDH20Q9HBT6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH20Q9HBT6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms