RNA–Protein interactions for RNA: ENST00000566025.1

EEF1DP3-203, Transcript of eukaryotic translation elongation factor 1 delta pseudogene 3, humanhuman

BASIC

Gene EEF1DP3, Length 782 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1DP3-203ENST00000566025 NISCHQ9Y2I1 1504 aa50.68■■■■■ 5.7
EEF1DP3-203ENST00000566025 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
EEF1DP3-203ENST00000566025 ABCC9O60706 1549 aa43.24■■■■■ 4.51
EEF1DP3-203ENST00000566025 ZCCHC6Q5VYS8 1495 aaKnown RBP42.35■■■■■ 4.37
EEF1DP3-203ENST00000566025 NACADO15069 1562 aa42.01■■■■■ 4.32
EEF1DP3-203ENST00000566025 DCAF1Q9Y4B6 1507 aa42.01■■■■■ 4.32
EEF1DP3-203ENST00000566025 MYO15BQ96JP2 1530 aa42■■■■■ 4.31
EEF1DP3-203ENST00000566025 DCAF8L2P0C7V8 631 aa41.94■■■■■ 4.3
EEF1DP3-203ENST00000566025 RB1CC1Q8TDY2 1594 aa41.9■■■■■ 4.3
EEF1DP3-203ENST00000566025 UNC13AQ9UPW8 1703 aa41.02■■■■■ 4.16
EEF1DP3-203ENST00000566025 SCRIBQ14160 1630 aa40.9■■■■■ 4.14
EEF1DP3-203ENST00000566025 BICRAQ9NZM4 1560 aa40.65■■■■■ 4.1
EEF1DP3-203ENST00000566025 PABPN1Q86U42 306 aaKnown RBP eCLIP40.47■■■■■ 4.07
EEF1DP3-203ENST00000566025 SHROOM4Q9ULL8 1493 aa40.29■■■■■ 4.04
EEF1DP3-203ENST00000566025 DNAJC5BQ9UF47 199 aa40.22■■■■■ 4.03
EEF1DP3-203ENST00000566025 EIF4G1Q04637 1599 aaKnown RBP39.5■■■■□ 3.91
EEF1DP3-203ENST00000566025 CECR2Q9BXF3 1484 aa39.39■■■■□ 3.9
EEF1DP3-203ENST00000566025 BAZ1AQ9NRL2 1556 aaPredicted RBP39.24■■■■□ 3.87
EEF1DP3-203ENST00000566025 SMARCA4P51532 1647 aa39.22■■■■□ 3.87
EEF1DP3-203ENST00000566025 CC2D2AQ9P2K1 1620 aa39.2■■■■□ 3.87
EEF1DP3-203ENST00000566025 MROH2BQ7Z745 1585 aa39.05■■■■□ 3.84
EEF1DP3-203ENST00000566025 PEG3Q9GZU2 1588 aa38.87■■■■□ 3.81
EEF1DP3-203ENST00000566025 ATAD2BQ9ULI0 1458 aa38.85■■■■□ 3.81
EEF1DP3-203ENST00000566025 SMARCA2P51531 1590 aa38.82■■■■□ 3.81
EEF1DP3-203ENST00000566025 RSF1Q96T23 1441 aaPredicted RBP38.8■■■■□ 3.8
EEF1DP3-203ENST00000566025 NCAPD3P42695 1498 aa38.75■■■■□ 3.79
EEF1DP3-203ENST00000566025 WIZO95785 1651 aa38.67■■■■□ 3.78
EEF1DP3-203ENST00000566025 HMGXB3Q12766 1538 aa38.63■■■■□ 3.78
EEF1DP3-203ENST00000566025 BAZ1BQ9UIG0 1483 aaKnown RBP38.53■■■■□ 3.76
EEF1DP3-203ENST00000566025 TOP2AP11388 1531 aaKnown RBP38.3■■■■□ 3.72
EEF1DP3-203ENST00000566025 SUPT5HO00267 1087 aaKnown RBP38.12■■■■□ 3.69
EEF1DP3-203ENST00000566025 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
EEF1DP3-203ENST00000566025 LAMC3Q9Y6N6 1575 aa37.64■■■■□ 3.62
EEF1DP3-203ENST00000566025 CADPSQ9ULU8 1353 aa37.63■■■■□ 3.61
EEF1DP3-203ENST00000566025 NESP48681 1621 aa37.61■■■■□ 3.61
EEF1DP3-203ENST00000566025 CFTRP13569 1480 aa37.54■■■■□ 3.6
EEF1DP3-203ENST00000566025 PRDM2Q13029 1718 aa37.37■■■■□ 3.57
EEF1DP3-203ENST00000566025 PDS5BQ9NTI5 1447 aa37.33■■■■□ 3.57
EEF1DP3-203ENST00000566025 KIF21AQ7Z4S6 1674 aa37.23■■■■□ 3.55
EEF1DP3-203ENST00000566025 ERCC6Q03468 1493 aa37.2■■■■□ 3.55
EEF1DP3-203ENST00000566025 FANCD2Q9BXW9 1451 aa37.18■■■■□ 3.54
EEF1DP3-203ENST00000566025 CEP164Q9UPV0 1460 aa37.07■■■■□ 3.53
EEF1DP3-203ENST00000566025 THOC2Q8NI27 1593 aaKnown RBP36.98■■■■□ 3.51
EEF1DP3-203ENST00000566025 MRC2Q9UBG0 1479 aa36.93■■■■□ 3.5
EEF1DP3-203ENST00000566025 DNAJC5Q9H3Z4 198 aa36.92■■■■□ 3.5
EEF1DP3-203ENST00000566025 WDR62O43379 1518 aa36.82■■■■□ 3.48
EEF1DP3-203ENST00000566025 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
EEF1DP3-203ENST00000566025 ABCC8Q09428 1581 aa36.7■■■■□ 3.47
EEF1DP3-203ENST00000566025 DNMBPQ6XZF7 1577 aa36.7■■■■□ 3.46
EEF1DP3-203ENST00000566025 CUX2O14529 1486 aa36.69■■■■□ 3.46
EEF1DP3-203ENST00000566025 TOPBP1Q92547 1522 aa36.67■■■■□ 3.46
EEF1DP3-203ENST00000566025 CUX1P39880 1505 aa36.61■■■■□ 3.45
EEF1DP3-203ENST00000566025 WRNQ14191 1432 aaPredicted RBP eCLIP36.56■■■■□ 3.44
EEF1DP3-203ENST00000566025 BIVM-ERCC5R4GMW8 1640 aa36.48■■■■□ 3.43
EEF1DP3-203ENST00000566025 SYNJ1O43426 1573 aa36.47■■■■□ 3.43
EEF1DP3-203ENST00000566025 TOP2BQ02880 1626 aa36.47■■■■□ 3.43
EEF1DP3-203ENST00000566025 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
EEF1DP3-203ENST00000566025 FGD5Q6ZNL6 1462 aa36.38■■■■□ 3.41
EEF1DP3-203ENST00000566025 IFT140Q96RY7 1462 aa36.3■■■■□ 3.4
EEF1DP3-203ENST00000566025 TARBP1Q13395 1621 aaKnown RBP36.26■■■■□ 3.4
EEF1DP3-203ENST00000566025 SOGA1O94964 1423 aa36.23■■■■□ 3.39
EEF1DP3-203ENST00000566025 RAD54L2Q9Y4B4 1467 aa36.2■■■■□ 3.39
EEF1DP3-203ENST00000566025 WDR97A6NE52 1622 aa36.12■■■■□ 3.37
EEF1DP3-203ENST00000566025 ABCA10Q8WWZ4 1543 aa36.08■■■■□ 3.37
EEF1DP3-203ENST00000566025 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
EEF1DP3-203ENST00000566025 TRIM41Q8WV44 630 aa36.01■■■■□ 3.36
EEF1DP3-203ENST00000566025 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
EEF1DP3-203ENST00000566025 CHIC1Q5VXU3 224 aa35.98■■■■□ 3.35
EEF1DP3-203ENST00000566025 TDRD9Q8NDG6 1382 aaKnown RBP35.93■■■■□ 3.34
EEF1DP3-203ENST00000566025 AQRO60306 1485 aaKnown RBP eCLIP35.92■■■■□ 3.34
EEF1DP3-203ENST00000566025 ABCA5Q8WWZ7 1642 aa35.91■■■■□ 3.34
EEF1DP3-203ENST00000566025 GAPVD1Q14C86 1478 aa35.83■■■■□ 3.33
EEF1DP3-203ENST00000566025 PBRM1Q86U86 1689 aa35.77■■■■□ 3.32
EEF1DP3-203ENST00000566025 GRIN2BQ13224 1484 aa35.75■■■■□ 3.31
EEF1DP3-203ENST00000566025 KIF27Q86VH2 1401 aa35.74■■■■□ 3.31
EEF1DP3-203ENST00000566025 ERICH3Q5RHP9 1530 aa35.67■■■■□ 3.3
EEF1DP3-203ENST00000566025 SNAPC4Q5SXM2 1469 aa35.62■■■■□ 3.29
EEF1DP3-203ENST00000566025 MAGI1Q96QZ7 1491 aaPredicted RBP35.62■■■■□ 3.29
EEF1DP3-203ENST00000566025 RUSC2Q8N2Y8 1516 aa35.6■■■■□ 3.29
EEF1DP3-203ENST00000566025 IGF1RP08069 1367 aa35.54■■■■□ 3.28
EEF1DP3-203ENST00000566025 ADAMTS12P58397 1594 aa35.51■■■■□ 3.28
EEF1DP3-203ENST00000566025 SYNJ2O15056 1496 aa35.47■■■■□ 3.27
EEF1DP3-203ENST00000566025 CUL7Q14999 1698 aa35.46■■■■□ 3.27
EEF1DP3-203ENST00000566025 EEA1Q15075 1411 aa35.46■■■■□ 3.27
EEF1DP3-203ENST00000566025 FHAD1B1AJZ9 1412 aa35.45■■■■□ 3.27
EEF1DP3-203ENST00000566025 CHD1O14646 1710 aa35.43■■■■□ 3.26
EEF1DP3-203ENST00000566025 CHMP7Q8WUX9 453 aaPredicted RBP35.33■■■■□ 3.25
EEF1DP3-203ENST00000566025 CARMIL1Q5VZK9 1371 aa35.32■■■■□ 3.24
EEF1DP3-203ENST00000566025 GRIN2AQ12879 1464 aa35.3■■■■□ 3.24
EEF1DP3-203ENST00000566025 FBLN2P98095 1184 aa35.29■■■■□ 3.24
EEF1DP3-203ENST00000566025 CSRNP3Q8WYN3 585 aa35.28■■■■□ 3.24
EEF1DP3-203ENST00000566025 PRXQ9BXM0 1461 aa35.24■■■■□ 3.23
EEF1DP3-203ENST00000566025 OSCARQ8IYS5 282 aa35.2■■■■□ 3.23
EEF1DP3-203ENST00000566025 FAM9AQ8IZU1 332 aaPredicted RBP35.2■■■■□ 3.23
EEF1DP3-203ENST00000566025 RAPGEF2Q9Y4G8 1499 aa35.2■■■■□ 3.23
EEF1DP3-203ENST00000566025 NUP160Q12769 1436 aa35.15■■■■□ 3.22
EEF1DP3-203ENST00000566025 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
EEF1DP3-203ENST00000566025 CLASP1Q7Z460 1538 aa35.07■■■■□ 3.21
EEF1DP3-203ENST00000566025 KIF21BO75037 1637 aa35.07■■■■□ 3.21
EEF1DP3-203ENST00000566025 KIAA0586Q9BVV6 1533 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms