Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 EEF1DP3-203ENST00000566025 782 ntBASIC18.69■□□□□ 0.58
CSNK1A1P48729 CCDC92B-201ENST00000575506 885 ntBASIC18.69■□□□□ 0.58
CSNK1A1P48729 TERF1P2-201ENST00000583350 1212 ntBASIC18.69■□□□□ 0.58
CSNK1A1P48729 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.69■□□□□ 0.58
CSNK1A1P48729 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 AC019069.1-201ENST00000610008 1333 ntBASIC18.69■□□□□ 0.58
CSNK1A1P48729 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1A1P48729 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CSNK1A1P48729 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.68■□□□□ 0.58
CSNK1A1P48729 AC053503.5-201ENST00000601508 636 ntBASIC18.68■□□□□ 0.58
CSNK1A1P48729 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1A1P48729 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSNK1A1P48729 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1A1P48729 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1A1P48729 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1A1P48729 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 KRT18P14-201ENST00000534205 1250 ntBASIC18.67■□□□□ 0.58
CSNK1A1P48729 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1A1P48729 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1A1P48729 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1A1P48729 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1A1P48729 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1A1P48729 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1A1P48729 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1A1P48729 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1A1P48729 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1A1P48729 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
CSNK1A1P48729 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.66■□□□□ 0.58
CSNK1A1P48729 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.66■□□□□ 0.58
CSNK1A1P48729 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1A1P48729 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CSNK1A1P48729 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1A1P48729 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1A1P48729 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1A1P48729 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSNK1A1P48729 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1A1P48729 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1A1P48729 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1A1P48729 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1A1P48729 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1A1P48729 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1A1P48729 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms