RNA–Protein interactions for RNA: ENST00000521315.5

SFTPC-205, Transcript of surfactant protein C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SFTPC, Length 1,046 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-205ENST00000521315 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
SFTPC-205ENST00000521315 CCDC180Q9P1Z9 1646 aa46■■■■■ 4.95
SFTPC-205ENST00000521315 ABCC9O60706 1549 aa44.65■■■■■ 4.74
SFTPC-205ENST00000521315 RB1CC1Q8TDY2 1594 aa43.16■■■■■ 4.5
SFTPC-205ENST00000521315 NACADO15069 1562 aa43.16■■■■■ 4.5
SFTPC-205ENST00000521315 ZCCHC6Q5VYS8 1495 aaKnown RBP43.06■■■■■ 4.48
SFTPC-205ENST00000521315 MYO15BQ96JP2 1530 aa43.01■■■■■ 4.48
SFTPC-205ENST00000521315 DCAF8L2P0C7V8 631 aa42.86■■■■■ 4.45
SFTPC-205ENST00000521315 DCAF1Q9Y4B6 1507 aa42.84■■■■■ 4.45
SFTPC-205ENST00000521315 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
SFTPC-205ENST00000521315 SCRIBQ14160 1630 aa41.81■■■■■ 4.28
SFTPC-205ENST00000521315 BICRAQ9NZM4 1560 aa41.79■■■■■ 4.28
SFTPC-205ENST00000521315 PABPN1Q86U42 306 aaKnown RBP eCLIP41.64■■■■■ 4.26
SFTPC-205ENST00000521315 SHROOM4Q9ULL8 1493 aa41.53■■■■■ 4.24
SFTPC-205ENST00000521315 DNAJC5BQ9UF47 199 aa40.76■■■■■ 4.12
SFTPC-205ENST00000521315 EIF4G1Q04637 1599 aaKnown RBP40.69■■■■■ 4.11
SFTPC-205ENST00000521315 CC2D2AQ9P2K1 1620 aa40.49■■■■■ 4.07
SFTPC-205ENST00000521315 CECR2Q9BXF3 1484 aa40.15■■■■■ 4.02
SFTPC-205ENST00000521315 SMARCA4P51532 1647 aa40.07■■■■■ 4.01
SFTPC-205ENST00000521315 BAZ1AQ9NRL2 1556 aaPredicted RBP40.06■■■■■ 4
SFTPC-205ENST00000521315 SMARCA2P51531 1590 aa39.81■■■■□ 3.96
SFTPC-205ENST00000521315 ATAD2BQ9ULI0 1458 aa39.77■■■■□ 3.96
SFTPC-205ENST00000521315 NCAPD3P42695 1498 aa39.76■■■■□ 3.96
SFTPC-205ENST00000521315 MROH2BQ7Z745 1585 aa39.74■■■■□ 3.95
SFTPC-205ENST00000521315 PEG3Q9GZU2 1588 aa39.74■■■■□ 3.95
SFTPC-205ENST00000521315 HMGXB3Q12766 1538 aa39.65■■■■□ 3.94
SFTPC-205ENST00000521315 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
SFTPC-205ENST00000521315 WIZO95785 1651 aa39.35■■■■□ 3.89
SFTPC-205ENST00000521315 RSF1Q96T23 1441 aaPredicted RBP39.32■■■■□ 3.89
SFTPC-205ENST00000521315 TOP2AP11388 1531 aaKnown RBP38.99■■■■□ 3.83
SFTPC-205ENST00000521315 LAMC3Q9Y6N6 1575 aa38.76■■■■□ 3.8
SFTPC-205ENST00000521315 NESP48681 1621 aa38.67■■■■□ 3.78
SFTPC-205ENST00000521315 CADPSQ9ULU8 1353 aa38.57■■■■□ 3.77
SFTPC-205ENST00000521315 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
SFTPC-205ENST00000521315 CCDC88BA6NC98 1476 aa38.45■■■■□ 3.75
SFTPC-205ENST00000521315 PDS5BQ9NTI5 1447 aa38.44■■■■□ 3.74
SFTPC-205ENST00000521315 CFTRP13569 1480 aa38.41■■■■□ 3.74
SFTPC-205ENST00000521315 KIF21AQ7Z4S6 1674 aa38.33■■■■□ 3.73
SFTPC-205ENST00000521315 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
SFTPC-205ENST00000521315 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
SFTPC-205ENST00000521315 THOC2Q8NI27 1593 aaKnown RBP38.19■■■■□ 3.7
SFTPC-205ENST00000521315 CUX2O14529 1486 aa38.17■■■■□ 3.7
SFTPC-205ENST00000521315 FANCD2Q9BXW9 1451 aa38.14■■■■□ 3.7
SFTPC-205ENST00000521315 CEP164Q9UPV0 1460 aa38.11■■■■□ 3.69
SFTPC-205ENST00000521315 MRC2Q9UBG0 1479 aa38.03■■■■□ 3.68
SFTPC-205ENST00000521315 WDR62O43379 1518 aa37.93■■■■□ 3.66
SFTPC-205ENST00000521315 URB2Q14146 1524 aaKnown RBP37.73■■■■□ 3.63
SFTPC-205ENST00000521315 ABCC8Q09428 1581 aa37.64■■■■□ 3.62
SFTPC-205ENST00000521315 DNMBPQ6XZF7 1577 aa37.57■■■■□ 3.6
SFTPC-205ENST00000521315 TOPBP1Q92547 1522 aa37.56■■■■□ 3.6
SFTPC-205ENST00000521315 IFT140Q96RY7 1462 aa37.32■■■■□ 3.56
SFTPC-205ENST00000521315 CUX1P39880 1505 aa37.3■■■■□ 3.56
SFTPC-205ENST00000521315 POLA1P09884 1462 aaPredicted RBP37.23■■■■□ 3.55
SFTPC-205ENST00000521315 TARBP1Q13395 1621 aaKnown RBP37.17■■■■□ 3.54
SFTPC-205ENST00000521315 FGD5Q6ZNL6 1462 aa37.15■■■■□ 3.54
SFTPC-205ENST00000521315 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
SFTPC-205ENST00000521315 BIVM-ERCC5R4GMW8 1640 aa37.1■■■■□ 3.53
SFTPC-205ENST00000521315 TOP2BQ02880 1626 aa37.08■■■■□ 3.53
SFTPC-205ENST00000521315 SOGA1O94964 1423 aa37.05■■■■□ 3.52
SFTPC-205ENST00000521315 ZNF608Q9ULD9 1512 aaPredicted RBP37.04■■■■□ 3.52
SFTPC-205ENST00000521315 WDR97A6NE52 1622 aa37.02■■■■□ 3.52
SFTPC-205ENST00000521315 SYNJ1O43426 1573 aa37■■■■□ 3.51
SFTPC-205ENST00000521315 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
SFTPC-205ENST00000521315 RAD54L2Q9Y4B4 1467 aa37■■■■□ 3.51
SFTPC-205ENST00000521315 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
SFTPC-205ENST00000521315 AQRO60306 1485 aaKnown RBP eCLIP36.83■■■■□ 3.49
SFTPC-205ENST00000521315 TDRD9Q8NDG6 1382 aaKnown RBP36.77■■■■□ 3.48
SFTPC-205ENST00000521315 DNAJC5Q9H3Z4 198 aa36.72■■■■□ 3.47
SFTPC-205ENST00000521315 ABCA5Q8WWZ7 1642 aa36.71■■■■□ 3.47
SFTPC-205ENST00000521315 GRIN2BQ13224 1484 aa36.66■■■■□ 3.46
SFTPC-205ENST00000521315 GAPVD1Q14C86 1478 aa36.66■■■■□ 3.46
SFTPC-205ENST00000521315 PBRM1Q86U86 1689 aa36.66■■■■□ 3.46
SFTPC-205ENST00000521315 MAGI1Q96QZ7 1491 aaPredicted RBP36.59■■■■□ 3.45
SFTPC-205ENST00000521315 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
SFTPC-205ENST00000521315 CHD1O14646 1710 aa36.53■■■■□ 3.44
SFTPC-205ENST00000521315 OSCARQ8IYS5 282 aa36.49■■■■□ 3.43
SFTPC-205ENST00000521315 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
SFTPC-205ENST00000521315 SYNJ2O15056 1496 aa36.42■■■■□ 3.42
SFTPC-205ENST00000521315 ADAMTS12P58397 1594 aa36.35■■■■□ 3.41
SFTPC-205ENST00000521315 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
SFTPC-205ENST00000521315 FBLN2P98095 1184 aa36.31■■■■□ 3.4
SFTPC-205ENST00000521315 CHMP7Q8WUX9 453 aaPredicted RBP36.3■■■■□ 3.4
SFTPC-205ENST00000521315 FHAD1B1AJZ9 1412 aa36.25■■■■□ 3.39
SFTPC-205ENST00000521315 TRIM41Q8WV44 630 aa36.22■■■■□ 3.39
SFTPC-205ENST00000521315 CUL7Q14999 1698 aa36.18■■■■□ 3.38
SFTPC-205ENST00000521315 GRIN2AQ12879 1464 aa36.18■■■■□ 3.38
SFTPC-205ENST00000521315 CLASP1Q7Z460 1538 aa36.13■■■■□ 3.37
SFTPC-205ENST00000521315 IGF1RP08069 1367 aa36.12■■■■□ 3.37
SFTPC-205ENST00000521315 NUP160Q12769 1436 aa36.02■■■■□ 3.36
SFTPC-205ENST00000521315 CEP170Q5SW79 1584 aa35.99■■■■□ 3.35
SFTPC-205ENST00000521315 RIMBP3CA6NJZ7 1639 aa35.96■■■■□ 3.35
SFTPC-205ENST00000521315 RIMBP3BA6NNM3 1639 aa35.96■■■■□ 3.35
SFTPC-205ENST00000521315 RIMBP3Q9UFD9 1639 aa35.96■■■■□ 3.35
SFTPC-205ENST00000521315 ARHGEF11O15085 1522 aa35.95■■■■□ 3.35
SFTPC-205ENST00000521315 CARMIL1Q5VZK9 1371 aa35.92■■■■□ 3.34
SFTPC-205ENST00000521315 RUSC2Q8N2Y8 1516 aa35.92■■■■□ 3.34
SFTPC-205ENST00000521315 CHIC1Q5VXU3 224 aa35.84■■■■□ 3.33
SFTPC-205ENST00000521315 EEA1Q15075 1411 aa35.8■■■■□ 3.32
SFTPC-205ENST00000521315 SHROOM2Q13796 1616 aa35.79■■■■□ 3.32
SFTPC-205ENST00000521315 RAPGEF2Q9Y4G8 1499 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms