RNA–Protein interactions for RNA: ENST00000301327.4

MFSD3-201, Transcript of major facilitator superfamily domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MFSD3, Length 1,548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD3-201ENST00000301327 NISCHQ9Y2I1 1504 aa50.24■■■■■ 5.63
MFSD3-201ENST00000301327 CCDC180Q9P1Z9 1646 aa44.33■■■■■ 4.69
MFSD3-201ENST00000301327 ABCC9O60706 1549 aa42.82■■■■■ 4.45
MFSD3-201ENST00000301327 ZCCHC6Q5VYS8 1495 aaKnown RBP41.95■■■■■ 4.31
MFSD3-201ENST00000301327 DCAF8L2P0C7V8 631 aa41.72■■■■■ 4.27
MFSD3-201ENST00000301327 MYO15BQ96JP2 1530 aa41.65■■■■■ 4.26
MFSD3-201ENST00000301327 DCAF1Q9Y4B6 1507 aa41.65■■■■■ 4.26
MFSD3-201ENST00000301327 NACADO15069 1562 aa41.62■■■■■ 4.25
MFSD3-201ENST00000301327 RB1CC1Q8TDY2 1594 aa41.48■■■■■ 4.23
MFSD3-201ENST00000301327 SCRIBQ14160 1630 aa40.44■■■■■ 4.06
MFSD3-201ENST00000301327 UNC13AQ9UPW8 1703 aa40.4■■■■■ 4.06
MFSD3-201ENST00000301327 BICRAQ9NZM4 1560 aa40.19■■■■■ 4.02
MFSD3-201ENST00000301327 PABPN1Q86U42 306 aaKnown RBP eCLIP40.16■■■■■ 4.02
MFSD3-201ENST00000301327 SHROOM4Q9ULL8 1493 aa39.93■■■■□ 3.98
MFSD3-201ENST00000301327 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
MFSD3-201ENST00000301327 CECR2Q9BXF3 1484 aa39.05■■■■□ 3.84
MFSD3-201ENST00000301327 BAZ1AQ9NRL2 1556 aaPredicted RBP38.89■■■■□ 3.82
MFSD3-201ENST00000301327 DNAJC5BQ9UF47 199 aa38.87■■■■□ 3.81
MFSD3-201ENST00000301327 SMARCA4P51532 1647 aa38.8■■■■□ 3.8
MFSD3-201ENST00000301327 CC2D2AQ9P2K1 1620 aa38.76■■■■□ 3.79
MFSD3-201ENST00000301327 MROH2BQ7Z745 1585 aa38.69■■■■□ 3.78
MFSD3-201ENST00000301327 RSF1Q96T23 1441 aaPredicted RBP38.53■■■■□ 3.76
MFSD3-201ENST00000301327 ATAD2BQ9ULI0 1458 aa38.51■■■■□ 3.76
MFSD3-201ENST00000301327 PEG3Q9GZU2 1588 aa38.48■■■■□ 3.75
MFSD3-201ENST00000301327 SMARCA2P51531 1590 aa38.48■■■■□ 3.75
MFSD3-201ENST00000301327 NCAPD3P42695 1498 aa38.46■■■■□ 3.75
MFSD3-201ENST00000301327 HMGXB3Q12766 1538 aa38.24■■■■□ 3.71
MFSD3-201ENST00000301327 WIZO95785 1651 aa38.24■■■■□ 3.71
MFSD3-201ENST00000301327 BAZ1BQ9UIG0 1483 aaKnown RBP38.19■■■■□ 3.7
MFSD3-201ENST00000301327 SUPT5HO00267 1087 aaKnown RBP37.94■■■■□ 3.66
MFSD3-201ENST00000301327 TOP2AP11388 1531 aaKnown RBP37.93■■■■□ 3.66
MFSD3-201ENST00000301327 CCDC88BA6NC98 1476 aa37.52■■■■□ 3.6
MFSD3-201ENST00000301327 CADPSQ9ULU8 1353 aa37.37■■■■□ 3.57
MFSD3-201ENST00000301327 LAMC3Q9Y6N6 1575 aa37.27■■■■□ 3.56
MFSD3-201ENST00000301327 CFTRP13569 1480 aa37.24■■■■□ 3.55
MFSD3-201ENST00000301327 NESP48681 1621 aa37.22■■■■□ 3.55
MFSD3-201ENST00000301327 PDS5BQ9NTI5 1447 aa37.07■■■■□ 3.52
MFSD3-201ENST00000301327 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
MFSD3-201ENST00000301327 FANCD2Q9BXW9 1451 aa36.86■■■■□ 3.49
MFSD3-201ENST00000301327 PRDM2Q13029 1718 aa36.81■■■■□ 3.48
MFSD3-201ENST00000301327 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
MFSD3-201ENST00000301327 KIF21AQ7Z4S6 1674 aa36.71■■■■□ 3.47
MFSD3-201ENST00000301327 MRC2Q9UBG0 1479 aa36.58■■■■□ 3.45
MFSD3-201ENST00000301327 THOC2Q8NI27 1593 aaKnown RBP36.51■■■■□ 3.43
MFSD3-201ENST00000301327 ABCC8Q09428 1581 aa36.44■■■■□ 3.42
MFSD3-201ENST00000301327 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
MFSD3-201ENST00000301327 WDR62O43379 1518 aa36.43■■■■□ 3.42
MFSD3-201ENST00000301327 CUX2O14529 1486 aa36.34■■■■□ 3.41
MFSD3-201ENST00000301327 TOPBP1Q92547 1522 aa36.33■■■■□ 3.41
MFSD3-201ENST00000301327 DNMBPQ6XZF7 1577 aa36.31■■■■□ 3.4
MFSD3-201ENST00000301327 WRNQ14191 1432 aaPredicted RBP eCLIP36.29■■■■□ 3.4
MFSD3-201ENST00000301327 CUX1P39880 1505 aa36.25■■■■□ 3.39
MFSD3-201ENST00000301327 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
MFSD3-201ENST00000301327 SYNJ1O43426 1573 aa36.07■■■■□ 3.37
MFSD3-201ENST00000301327 POLA1P09884 1462 aaPredicted RBP36.06■■■■□ 3.36
MFSD3-201ENST00000301327 BIVM-ERCC5R4GMW8 1640 aa36.05■■■■□ 3.36
MFSD3-201ENST00000301327 FGD5Q6ZNL6 1462 aa36.04■■■■□ 3.36
MFSD3-201ENST00000301327 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
MFSD3-201ENST00000301327 SOGA1O94964 1423 aa35.97■■■■□ 3.35
MFSD3-201ENST00000301327 RAD54L2Q9Y4B4 1467 aa35.88■■■■□ 3.33
MFSD3-201ENST00000301327 TRIM41Q8WV44 630 aa35.87■■■■□ 3.33
MFSD3-201ENST00000301327 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
MFSD3-201ENST00000301327 CHIC1Q5VXU3 224 aa35.83■■■■□ 3.33
MFSD3-201ENST00000301327 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
MFSD3-201ENST00000301327 ZNF608Q9ULD9 1512 aaPredicted RBP35.72■■■■□ 3.31
MFSD3-201ENST00000301327 TDRD9Q8NDG6 1382 aaKnown RBP35.68■■■■□ 3.3
MFSD3-201ENST00000301327 WDR97A6NE52 1622 aa35.67■■■■□ 3.3
MFSD3-201ENST00000301327 AQRO60306 1485 aaKnown RBP eCLIP35.63■■■■□ 3.292e-6■■■■■ 43.2
MFSD3-201ENST00000301327 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
MFSD3-201ENST00000301327 GAPVD1Q14C86 1478 aa35.54■■■■□ 3.28
MFSD3-201ENST00000301327 KIF27Q86VH2 1401 aa35.51■■■■□ 3.28
MFSD3-201ENST00000301327 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
MFSD3-201ENST00000301327 GRIN2BQ13224 1484 aa35.47■■■■□ 3.27
MFSD3-201ENST00000301327 ERICH3Q5RHP9 1530 aa35.36■■■■□ 3.25
MFSD3-201ENST00000301327 IGF1RP08069 1367 aa35.34■■■■□ 3.25
MFSD3-201ENST00000301327 MAGI1Q96QZ7 1491 aaPredicted RBP35.32■■■■□ 3.24
MFSD3-201ENST00000301327 RUSC2Q8N2Y8 1516 aa35.29■■■■□ 3.24
MFSD3-201ENST00000301327 SNAPC4Q5SXM2 1469 aa35.28■■■■□ 3.24
MFSD3-201ENST00000301327 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
MFSD3-201ENST00000301327 EEA1Q15075 1411 aa35.26■■■■□ 3.24
MFSD3-201ENST00000301327 FHAD1B1AJZ9 1412 aa35.19■■■■□ 3.22
MFSD3-201ENST00000301327 SYNJ2O15056 1496 aa35.16■■■■□ 3.22
MFSD3-201ENST00000301327 CHMP7Q8WUX9 453 aaPredicted RBP35.14■■■■□ 3.22
MFSD3-201ENST00000301327 CSRNP3Q8WYN3 585 aa35.14■■■■□ 3.22
MFSD3-201ENST00000301327 CARMIL1Q5VZK9 1371 aa35.11■■■■□ 3.21
MFSD3-201ENST00000301327 ADAMTS12P58397 1594 aa35.11■■■■□ 3.21
MFSD3-201ENST00000301327 FBLN2P98095 1184 aa35.08■■■■□ 3.21
MFSD3-201ENST00000301327 CUL7Q14999 1698 aa35.08■■■■□ 3.21
MFSD3-201ENST00000301327 OSCARQ8IYS5 282 aa35.01■■■■□ 3.2
MFSD3-201ENST00000301327 FAM9AQ8IZU1 332 aaPredicted RBP35.01■■■■□ 3.2
MFSD3-201ENST00000301327 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
MFSD3-201ENST00000301327 PRXQ9BXM0 1461 aa34.98■■■■□ 3.19
MFSD3-201ENST00000301327 RAPGEF2Q9Y4G8 1499 aa34.94■■■■□ 3.18
MFSD3-201ENST00000301327 CHD1O14646 1710 aa34.93■■■■□ 3.18
MFSD3-201ENST00000301327 NUP160Q12769 1436 aa34.85■■■■□ 3.17
MFSD3-201ENST00000301327 KIF21BO75037 1637 aa34.73■■■■□ 3.15
MFSD3-201ENST00000301327 CEP170Q5SW79 1584 aa34.73■■■■□ 3.15
MFSD3-201ENST00000301327 CLASP1Q7Z460 1538 aa34.68■■■■□ 3.14
MFSD3-201ENST00000301327 KIAA0586Q9BVV6 1533 aa34.68■■■■□ 3.14
MFSD3-201ENST00000301327 DNAJC5Q9H3Z4 198 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms