Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 MIR6821-201ENST00000617625 74 ntBASIC18.5■□□□□ 0.55
CDH20Q9HBT6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH20Q9HBT6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 KRT18P14-201ENST00000534205 1250 ntBASIC18.49■□□□□ 0.55
CDH20Q9HBT6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 AC055733.4-201ENST00000638462 1354 ntBASIC18.49■□□□□ 0.55
CDH20Q9HBT6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 EP400NL-214ENST00000641289 2402 ntBASIC18.49■□□□□ 0.55
CDH20Q9HBT6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH20Q9HBT6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 AC034268.1-201ENST00000441047 882 ntBASIC18.48■□□□□ 0.55
CDH20Q9HBT6 TERF1P2-201ENST00000583350 1212 ntBASIC18.48■□□□□ 0.55
CDH20Q9HBT6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH20Q9HBT6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 AC104564.3-201ENST00000582367 638 ntBASIC18.47■□□□□ 0.55
CDH20Q9HBT6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 AC087623.3-201ENST00000607047 1098 ntBASIC18.47■□□□□ 0.55
CDH20Q9HBT6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CDH20Q9HBT6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 AC026271.2-201ENST00000428091 497 ntBASIC18.46■□□□□ 0.55
CDH20Q9HBT6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH20Q9HBT6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDH20Q9HBT6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms