RNA–Protein interactions for RNA: ENST00000537332.2

CITED2-203, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2, humanhuman

TSL 3 BASIC

Gene CITED2, Length 1,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED2-203ENST00000537332 NISCHQ9Y2I1 1504 aa48.74■■■■■ 5.39
CITED2-203ENST00000537332 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
CITED2-203ENST00000537332 ZCCHC6Q5VYS8 1495 aaKnown RBP40.87■■■■■ 4.13
CITED2-203ENST00000537332 DCAF8L2P0C7V8 631 aa40.56■■■■■ 4.08
CITED2-203ENST00000537332 ABCC9O60706 1549 aa40.56■■■■■ 4.08
CITED2-203ENST00000537332 DCAF1Q9Y4B6 1507 aa40.25■■■■■ 4.03
CITED2-203ENST00000537332 MYO15BQ96JP2 1530 aa39.85■■■■□ 3.97
CITED2-203ENST00000537332 SHROOM4Q9ULL8 1493 aa39.74■■■■□ 3.95
CITED2-203ENST00000537332 NACADO15069 1562 aa39.72■■■■□ 3.95
CITED2-203ENST00000537332 RB1CC1Q8TDY2 1594 aa39.43■■■■□ 3.9
CITED2-203ENST00000537332 SCRIBQ14160 1630 aa39.15■■■■□ 3.86
CITED2-203ENST00000537332 UNC13AQ9UPW8 1703 aa38.5■■■■□ 3.75
CITED2-203ENST00000537332 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
CITED2-203ENST00000537332 BICRAQ9NZM4 1560 aa38.22■■■■□ 3.71
CITED2-203ENST00000537332 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
CITED2-203ENST00000537332 CECR2Q9BXF3 1484 aa37.93■■■■□ 3.66
CITED2-203ENST00000537332 RSF1Q96T23 1441 aaPredicted RBP37.77■■■■□ 3.64
CITED2-203ENST00000537332 MROH2BQ7Z745 1585 aa37.66■■■■□ 3.62
CITED2-203ENST00000537332 BAZ1AQ9NRL2 1556 aaPredicted RBP37.64■■■■□ 3.62
CITED2-203ENST00000537332 SMARCA4P51532 1647 aa37.47■■■■□ 3.59
CITED2-203ENST00000537332 WIZO95785 1651 aa37.31■■■■□ 3.56
CITED2-203ENST00000537332 EIF4G1Q04637 1599 aaKnown RBP37.11■■■■□ 3.53
CITED2-203ENST00000537332 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
CITED2-203ENST00000537332 ATAD2BQ9ULI0 1458 aa36.98■■■■□ 3.51
CITED2-203ENST00000537332 SMARCA2P51531 1590 aa36.92■■■■□ 3.5
CITED2-203ENST00000537332 TOP2AP11388 1531 aaKnown RBP36.92■■■■□ 3.5
CITED2-203ENST00000537332 BAZ1BQ9UIG0 1483 aaKnown RBP36.76■■■■□ 3.48
CITED2-203ENST00000537332 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
CITED2-203ENST00000537332 CC2D2AQ9P2K1 1620 aa36.62■■■■□ 3.45
CITED2-203ENST00000537332 CCDC88BA6NC98 1476 aa36.6■■■■□ 3.45
CITED2-203ENST00000537332 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
CITED2-203ENST00000537332 CHIC1Q5VXU3 224 aa36.38■■■■□ 3.41
CITED2-203ENST00000537332 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
CITED2-203ENST00000537332 TRIM41Q8WV44 630 aa35.9■■■■□ 3.34
CITED2-203ENST00000537332 CFTRP13569 1480 aa35.81■■■■□ 3.32
CITED2-203ENST00000537332 CADPSQ9ULU8 1353 aa35.78■■■■□ 3.32
CITED2-203ENST00000537332 ABCC8Q09428 1581 aa35.73■■■■□ 3.31
CITED2-203ENST00000537332 WRNQ14191 1432 aaPredicted RBP eCLIP35.57■■■■□ 3.28
CITED2-203ENST00000537332 NESP48681 1621 aa35.51■■■■□ 3.28
CITED2-203ENST00000537332 PRDM2Q13029 1718 aa35.44■■■■□ 3.26
CITED2-203ENST00000537332 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
CITED2-203ENST00000537332 FANCD2Q9BXW9 1451 aa35.36■■■■□ 3.25
CITED2-203ENST00000537332 SYNJ1O43426 1573 aa35.36■■■■□ 3.25
CITED2-203ENST00000537332 FAM9AQ8IZU1 332 aaPredicted RBP35.27■■■■□ 3.24
CITED2-203ENST00000537332 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.23
CITED2-203ENST00000537332 TOP2BQ02880 1626 aa35.22■■■■□ 3.23
CITED2-203ENST00000537332 CUX1P39880 1505 aa35.22■■■■□ 3.23
CITED2-203ENST00000537332 BIVM-ERCC5R4GMW8 1640 aa35.15■■■■□ 3.22
CITED2-203ENST00000537332 CEP164Q9UPV0 1460 aa35.15■■■■□ 3.22
CITED2-203ENST00000537332 SOGA1O94964 1423 aa35.08■■■■□ 3.21
CITED2-203ENST00000537332 LOC105371045A0A1W2PR82 267 aa35.03■■■■□ 3.2
CITED2-203ENST00000537332 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
CITED2-203ENST00000537332 DNMBPQ6XZF7 1577 aa34.95■■■■□ 3.19
CITED2-203ENST00000537332 RUSC2Q8N2Y8 1516 aa34.94■■■■□ 3.18
CITED2-203ENST00000537332 TOPBP1Q92547 1522 aa34.93■■■■□ 3.18
CITED2-203ENST00000537332 EEA1Q15075 1411 aa34.92■■■■□ 3.18
CITED2-203ENST00000537332 URB2Q14146 1524 aaKnown RBP34.9■■■■□ 3.18
CITED2-203ENST00000537332 FGD5Q6ZNL6 1462 aa34.89■■■■□ 3.18
CITED2-203ENST00000537332 CSRNP3Q8WYN3 585 aa34.85■■■■□ 3.17
CITED2-203ENST00000537332 EHMT2Q96KQ7 1210 aa34.82■■■■□ 3.16
CITED2-203ENST00000537332 ERCC6Q03468 1493 aa34.81■■■■□ 3.16
CITED2-203ENST00000537332 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
CITED2-203ENST00000537332 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
CITED2-203ENST00000537332 KIF27Q86VH2 1401 aa34.7■■■■□ 3.15
CITED2-203ENST00000537332 RAD54L2Q9Y4B4 1467 aa34.68■■■■□ 3.14
CITED2-203ENST00000537332 CUX2O14529 1486 aa34.66■■■■□ 3.14
CITED2-203ENST00000537332 WDR62O43379 1518 aa34.56■■■■□ 3.12
CITED2-203ENST00000537332 ABCA10Q8WWZ4 1543 aa34.56■■■■□ 3.12
CITED2-203ENST00000537332 THOC2Q8NI27 1593 aaKnown RBP34.46■■■■□ 3.11
CITED2-203ENST00000537332 IGF1RP08069 1367 aa34.44■■■■□ 3.1
CITED2-203ENST00000537332 UBTFP17480 764 aaKnown RBP34.44■■■■□ 3.1
CITED2-203ENST00000537332 GOLGA3Q08378 1498 aa34.44■■■■□ 3.1
CITED2-203ENST00000537332 KIF21BO75037 1637 aa34.41■■■■□ 3.1
CITED2-203ENST00000537332 TDRD9Q8NDG6 1382 aaKnown RBP34.4■■■■□ 3.1
CITED2-203ENST00000537332 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
CITED2-203ENST00000537332 PRXQ9BXM0 1461 aa34.37■■■■□ 3.09
CITED2-203ENST00000537332 WDR97A6NE52 1622 aa34.36■■■■□ 3.09
CITED2-203ENST00000537332 RAPGEF2Q9Y4G8 1499 aa34.34■■■■□ 3.09
CITED2-203ENST00000537332 IFT140Q96RY7 1462 aa34.32■■■■□ 3.09
CITED2-203ENST00000537332 TNIKQ9UKE5 1360 aa34.31■■■■□ 3.08
CITED2-203ENST00000537332 GAPVD1Q14C86 1478 aa34.28■■■■□ 3.08
CITED2-203ENST00000537332 CARMIL1Q5VZK9 1371 aa34.27■■■■□ 3.08
CITED2-203ENST00000537332 ERICH3Q5RHP9 1530 aa34.24■■■■□ 3.07
CITED2-203ENST00000537332 ABCA5Q8WWZ7 1642 aa34.23■■■■□ 3.07
CITED2-203ENST00000537332 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.073e-9■■■■■ 45.4
CITED2-203ENST00000537332 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
CITED2-203ENST00000537332 CEP162Q5TB80 1403 aa34.1■■■■□ 3.05
CITED2-203ENST00000537332 CUL7Q14999 1698 aa34.06■■■■□ 3.04
CITED2-203ENST00000537332 GRIN2BQ13224 1484 aa34.04■■■■□ 3.04
CITED2-203ENST00000537332 RANGAP1P46060 587 aaPredicted RBP33.98■■■■□ 3.03
CITED2-203ENST00000537332 PBRM1Q86U86 1689 aa33.98■■■■□ 3.03
CITED2-203ENST00000537332 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
CITED2-203ENST00000537332 CLIP1P30622 1438 aa33.91■■■■□ 3.02
CITED2-203ENST00000537332 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
CITED2-203ENST00000537332 SNAPC4Q5SXM2 1469 aa33.83■■■■□ 3.01
CITED2-203ENST00000537332 ADAMTS12P58397 1594 aa33.82■■■■□ 3
CITED2-203ENST00000537332 MAGI1Q96QZ7 1491 aaPredicted RBP33.74■■■□□ 2.99
CITED2-203ENST00000537332 CHMP7Q8WUX9 453 aaPredicted RBP33.69■■■□□ 2.98
CITED2-203ENST00000537332 FBLN2P98095 1184 aa33.65■■■□□ 2.98
CITED2-203ENST00000537332 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms