Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 SRD5A1P1-201ENST00000442297 786 ntBASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PCDHA13Q9Y5I0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 AL034346.1-201ENST00000568244 1277 ntBASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 AP004607.7-201ENST00000527152 1677 ntBASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHA13Q9Y5I0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHA13Q9Y5I0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
PCDHA13Q9Y5I0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 AC092171.4-201ENST00000609130 632 ntBASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDHA13Q9Y5I0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHA13Q9Y5I0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHA13Q9Y5I0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 AL512631.2-201ENST00000604634 923 ntBASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
PCDHA13Q9Y5I0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 AL035685.1-201ENST00000636663 812 ntBASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 LINC01006-201ENST00000333319 2292 ntBASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDHA13Q9Y5I0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms