RNA–Protein interactions for RNA: ENST00000395068.8

GRINA-202, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRINA, Length 1,814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-202ENST00000395068 NISCHQ9Y2I1 1504 aa48.14■■■■■ 5.3
GRINA-202ENST00000395068 CCDC180Q9P1Z9 1646 aa41.96■■■■■ 4.31
GRINA-202ENST00000395068 ZCCHC6Q5VYS8 1495 aaKnown RBP40.42■■■■■ 4.06
GRINA-202ENST00000395068 ABCC9O60706 1549 aa39.85■■■■□ 3.97
GRINA-202ENST00000395068 DCAF1Q9Y4B6 1507 aa39.81■■■■□ 3.96
GRINA-202ENST00000395068 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
GRINA-202ENST00000395068 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
GRINA-202ENST00000395068 NACADO15069 1562 aa39.15■■■■□ 3.86
GRINA-202ENST00000395068 SHROOM4Q9ULL8 1493 aa39.13■■■■□ 3.85
GRINA-202ENST00000395068 RB1CC1Q8TDY2 1594 aa38.81■■■■□ 3.8
GRINA-202ENST00000395068 SCRIBQ14160 1630 aa38.58■■■■□ 3.77
GRINA-202ENST00000395068 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
GRINA-202ENST00000395068 BICRAQ9NZM4 1560 aa37.75■■■■□ 3.63
GRINA-202ENST00000395068 PABPN1Q86U42 306 aaKnown RBP eCLIP37.59■■■■□ 3.61
GRINA-202ENST00000395068 SUPT5HO00267 1087 aaKnown RBP37.57■■■■□ 3.6
GRINA-202ENST00000395068 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
GRINA-202ENST00000395068 RSF1Q96T23 1441 aaPredicted RBP37.32■■■■□ 3.57
GRINA-202ENST00000395068 MROH2BQ7Z745 1585 aa37.2■■■■□ 3.55
GRINA-202ENST00000395068 BAZ1AQ9NRL2 1556 aaPredicted RBP37.13■■■■□ 3.54
GRINA-202ENST00000395068 SMARCA4P51532 1647 aa37■■■■□ 3.51
GRINA-202ENST00000395068 WIZO95785 1651 aa36.84■■■■□ 3.49
GRINA-202ENST00000395068 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
GRINA-202ENST00000395068 EIF4G1Q04637 1599 aaKnown RBP36.57■■■■□ 3.44
GRINA-202ENST00000395068 ATAD2BQ9ULI0 1458 aa36.48■■■■□ 3.43
GRINA-202ENST00000395068 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
GRINA-202ENST00000395068 SMARCA2P51531 1590 aa36.38■■■■□ 3.41
GRINA-202ENST00000395068 BAZ1BQ9UIG0 1483 aaKnown RBP36.2■■■■□ 3.39
GRINA-202ENST00000395068 NCAPD3P42695 1498 aa36.2■■■■□ 3.39
GRINA-202ENST00000395068 CCDC88BA6NC98 1476 aa36.13■■■■□ 3.37
GRINA-202ENST00000395068 HMGXB3Q12766 1538 aa36.09■■■■□ 3.37
GRINA-202ENST00000395068 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
GRINA-202ENST00000395068 CHIC1Q5VXU3 224 aa35.96■■■■□ 3.35
GRINA-202ENST00000395068 DNAJC5BQ9UF47 199 aa35.39■■■■□ 3.26
GRINA-202ENST00000395068 CFTRP13569 1480 aa35.35■■■■□ 3.25
GRINA-202ENST00000395068 TRIM41Q8WV44 630 aa35.33■■■■□ 3.25
GRINA-202ENST00000395068 ABCC8Q09428 1581 aa35.29■■■■□ 3.24
GRINA-202ENST00000395068 CADPSQ9ULU8 1353 aa35.24■■■■□ 3.23
GRINA-202ENST00000395068 WRNQ14191 1432 aaPredicted RBP eCLIP35.09■■■■□ 3.21
GRINA-202ENST00000395068 PRDM2Q13029 1718 aa35.01■■■■□ 3.2
GRINA-202ENST00000395068 NESP48681 1621 aa34.98■■■■□ 3.19
GRINA-202ENST00000395068 SYNJ1O43426 1573 aa34.95■■■■□ 3.19
GRINA-202ENST00000395068 LAMC3Q9Y6N6 1575 aa34.91■■■■□ 3.18
GRINA-202ENST00000395068 FANCD2Q9BXW9 1451 aa34.82■■■■□ 3.16
GRINA-202ENST00000395068 TOP2BQ02880 1626 aa34.8■■■■□ 3.16
GRINA-202ENST00000395068 CUX1P39880 1505 aa34.78■■■■□ 3.16
GRINA-202ENST00000395068 BIVM-ERCC5R4GMW8 1640 aa34.75■■■■□ 3.15
GRINA-202ENST00000395068 FAM9AQ8IZU1 332 aaPredicted RBP34.67■■■■□ 3.14
GRINA-202ENST00000395068 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
GRINA-202ENST00000395068 SOGA1O94964 1423 aa34.64■■■■□ 3.14
GRINA-202ENST00000395068 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
GRINA-202ENST00000395068 LOC105371045A0A1W2PR82 267 aa34.57■■■■□ 3.12
GRINA-202ENST00000395068 RUSC2Q8N2Y8 1516 aa34.53■■■■□ 3.12
GRINA-202ENST00000395068 EEA1Q15075 1411 aa34.48■■■■□ 3.11
GRINA-202ENST00000395068 KIF21AQ7Z4S6 1674 aa34.47■■■■□ 3.11
GRINA-202ENST00000395068 DNMBPQ6XZF7 1577 aa34.47■■■■□ 3.11
GRINA-202ENST00000395068 TOPBP1Q92547 1522 aa34.44■■■■□ 3.1
GRINA-202ENST00000395068 URB2Q14146 1524 aaKnown RBP34.43■■■■□ 3.1
GRINA-202ENST00000395068 FGD5Q6ZNL6 1462 aa34.4■■■■□ 3.1
GRINA-202ENST00000395068 CSRNP3Q8WYN3 585 aa34.34■■■■□ 3.09
GRINA-202ENST00000395068 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
GRINA-202ENST00000395068 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
GRINA-202ENST00000395068 KIF27Q86VH2 1401 aa34.19■■■■□ 3.06
GRINA-202ENST00000395068 RAD54L2Q9Y4B4 1467 aa34.17■■■■□ 3.06
GRINA-202ENST00000395068 EHMT2Q96KQ7 1210 aa34.16■■■■□ 3.06
GRINA-202ENST00000395068 CUX2O14529 1486 aa34.14■■■■□ 3.06
GRINA-202ENST00000395068 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
GRINA-202ENST00000395068 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
GRINA-202ENST00000395068 WDR62O43379 1518 aa34.08■■■■□ 3.05
GRINA-202ENST00000395068 KIF21BO75037 1637 aa34.04■■■■□ 3.04
GRINA-202ENST00000395068 GOLGA3Q08378 1498 aa33.99■■■■□ 3.03
GRINA-202ENST00000395068 THOC2Q8NI27 1593 aaKnown RBP33.99■■■■□ 3.03
GRINA-202ENST00000395068 PRXQ9BXM0 1461 aa33.99■■■■□ 3.03
GRINA-202ENST00000395068 IGF1RP08069 1367 aa33.98■■■■□ 3.03
GRINA-202ENST00000395068 WDR97A6NE52 1622 aa33.97■■■■□ 3.03
GRINA-202ENST00000395068 TARBP1Q13395 1621 aaKnown RBP33.94■■■■□ 3.02
GRINA-202ENST00000395068 RAPGEF2Q9Y4G8 1499 aa33.93■■■■□ 3.02
GRINA-202ENST00000395068 TNIKQ9UKE5 1360 aa33.9■■■■□ 3.02
GRINA-202ENST00000395068 ERICH3Q5RHP9 1530 aa33.85■■■■□ 3.01
GRINA-202ENST00000395068 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
GRINA-202ENST00000395068 UBTFP17480 764 aaKnown RBP33.83■■■■□ 3.01
GRINA-202ENST00000395068 ABCA5Q8WWZ7 1642 aa33.82■■■■□ 3
GRINA-202ENST00000395068 IFT140Q96RY7 1462 aa33.79■■■■□ 3
GRINA-202ENST00000395068 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
GRINA-202ENST00000395068 CARMIL1Q5VZK9 1371 aa33.76■■■□□ 2.99
GRINA-202ENST00000395068 CEP162Q5TB80 1403 aa33.69■■■□□ 2.98
GRINA-202ENST00000395068 ZNF608Q9ULD9 1512 aaPredicted RBP33.66■■■□□ 2.98
GRINA-202ENST00000395068 AQRO60306 1485 aaKnown RBP eCLIP33.66■■■□□ 2.983e-12■■■■■ 47.9
GRINA-202ENST00000395068 CUL7Q14999 1698 aa33.61■■■□□ 2.97
GRINA-202ENST00000395068 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
GRINA-202ENST00000395068 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
GRINA-202ENST00000395068 EIF4G3O43432 1585 aaKnown RBP33.48■■■□□ 2.95
GRINA-202ENST00000395068 CLIP1P30622 1438 aa33.45■■■□□ 2.95
GRINA-202ENST00000395068 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
GRINA-202ENST00000395068 ADAMTS12P58397 1594 aa33.38■■■□□ 2.93
GRINA-202ENST00000395068 SNAPC4Q5SXM2 1469 aa33.31■■■□□ 2.92
GRINA-202ENST00000395068 RANGAP1P46060 587 aaPredicted RBP33.31■■■□□ 2.92
GRINA-202ENST00000395068 MAGI1Q96QZ7 1491 aaPredicted RBP33.24■■■□□ 2.91
GRINA-202ENST00000395068 ARHGAP35Q9NRY4 1499 aa33.21■■■□□ 2.91
GRINA-202ENST00000395068 ARAP1Q96P48 1450 aa33.19■■■□□ 2.9
GRINA-202ENST00000395068 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms