RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 NISCHQ9Y2I1 1504 aa43.3■■■■■ 4.52
LINC01006-201ENST00000333319 CCDC180Q9P1Z9 1646 aa37.01■■■■□ 3.51
LINC01006-201ENST00000333319 SHROOM4Q9ULL8 1493 aa36.59■■■■□ 3.45
LINC01006-201ENST00000333319 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
LINC01006-201ENST00000333319 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.34
LINC01006-201ENST00000333319 SUPT5HO00267 1087 aaKnown RBP35.77■■■■□ 3.32
LINC01006-201ENST00000333319 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
LINC01006-201ENST00000333319 CHIC1Q5VXU3 224 aa34.69■■■■□ 3.14
LINC01006-201ENST00000333319 MYO15BQ96JP2 1530 aa34.68■■■■□ 3.14
LINC01006-201ENST00000333319 SCRIBQ14160 1630 aa34.55■■■■□ 3.12
LINC01006-201ENST00000333319 ABCC9O60706 1549 aa34.45■■■■□ 3.11
LINC01006-201ENST00000333319 NACADO15069 1562 aa34.27■■■■□ 3.08
LINC01006-201ENST00000333319 RSF1Q96T23 1441 aaPredicted RBP34.14■■■■□ 3.06
LINC01006-201ENST00000333319 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
LINC01006-201ENST00000333319 CECR2Q9BXF3 1484 aa33.75■■■□□ 2.99
LINC01006-201ENST00000333319 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
LINC01006-201ENST00000333319 LOC105371045A0A1W2PR82 267 aa33.6■■■□□ 2.97
LINC01006-201ENST00000333319 WIZO95785 1651 aa33.43■■■□□ 2.94
LINC01006-201ENST00000333319 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
LINC01006-201ENST00000333319 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
LINC01006-201ENST00000333319 PCGF6Q9BYE7 350 aa33.28■■■□□ 2.92
LINC01006-201ENST00000333319 UNC13AQ9UPW8 1703 aa33.24■■■□□ 2.91
LINC01006-201ENST00000333319 HRCP23327 699 aa33.11■■■□□ 2.89
LINC01006-201ENST00000333319 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
LINC01006-201ENST00000333319 FAM9AQ8IZU1 332 aaPredicted RBP33.04■■■□□ 2.88
LINC01006-201ENST00000333319 TOP2AP11388 1531 aaKnown RBP32.94■■■□□ 2.86
LINC01006-201ENST00000333319 EIF4G1Q04637 1599 aaKnown RBP32.87■■■□□ 2.85
LINC01006-201ENST00000333319 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.85
LINC01006-201ENST00000333319 BICRAQ9NZM4 1560 aa32.82■■■□□ 2.85
LINC01006-201ENST00000333319 TRIM26Q12899 539 aaPredicted RBP32.77■■■□□ 2.84
LINC01006-201ENST00000333319 CCDC88BA6NC98 1476 aa32.77■■■□□ 2.84
LINC01006-201ENST00000333319 SMARCA2P51531 1590 aa32.73■■■□□ 2.83
LINC01006-201ENST00000333319 EHMT2Q96KQ7 1210 aa32.72■■■□□ 2.83
LINC01006-201ENST00000333319 ABCC8Q09428 1581 aa32.56■■■□□ 2.8
LINC01006-201ENST00000333319 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
LINC01006-201ENST00000333319 PPARGC1BQ86YN6 1023 aaKnown RBP32.4■■■□□ 2.78
LINC01006-201ENST00000333319 ATAD2BQ9ULI0 1458 aa32.25■■■□□ 2.75
LINC01006-201ENST00000333319 SOGA1O94964 1423 aa32.2■■■□□ 2.74
LINC01006-201ENST00000333319 BAZ1BQ9UIG0 1483 aaKnown RBP32.15■■■□□ 2.74
LINC01006-201ENST00000333319 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.73
LINC01006-201ENST00000333319 EEA1Q15075 1411 aa32.07■■■□□ 2.72
LINC01006-201ENST00000333319 RUSC2Q8N2Y8 1516 aa32.04■■■□□ 2.72
LINC01006-201ENST00000333319 CSRNP3Q8WYN3 585 aa32.02■■■□□ 2.72
LINC01006-201ENST00000333319 ZEB1P37275 1124 aaPredicted RBP31.95■■■□□ 2.71
LINC01006-201ENST00000333319 TNIKQ9UKE5 1360 aa31.93■■■□□ 2.7
LINC01006-201ENST00000333319 CEP162Q5TB80 1403 aa31.93■■■□□ 2.7
LINC01006-201ENST00000333319 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
LINC01006-201ENST00000333319 UBTFP17480 764 aaKnown RBP31.84■■■□□ 2.69
LINC01006-201ENST00000333319 GOLGA3Q08378 1498 aa31.8■■■□□ 2.68
LINC01006-201ENST00000333319 NCAPD3P42695 1498 aa31.7■■■□□ 2.67
LINC01006-201ENST00000333319 HMGXB3Q12766 1538 aa31.68■■■□□ 2.66
LINC01006-201ENST00000333319 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
LINC01006-201ENST00000333319 KIF21BO75037 1637 aa31.63■■■□□ 2.65
LINC01006-201ENST00000333319 TTBK1Q5TCY1 1321 aaPredicted RBP31.6■■■□□ 2.65
LINC01006-201ENST00000333319 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
LINC01006-201ENST00000333319 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
LINC01006-201ENST00000333319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.47■■■□□ 2.63
LINC01006-201ENST00000333319 RAPGEF2Q9Y4G8 1499 aa31.44■■■□□ 2.62
LINC01006-201ENST00000333319 CLIP1P30622 1438 aa31.41■■■□□ 2.62
LINC01006-201ENST00000333319 CCER1Q8TC90 406 aaPredicted RBP31.4■■■□□ 2.62
LINC01006-201ENST00000333319 CFTRP13569 1480 aa31.36■■■□□ 2.61
LINC01006-201ENST00000333319 CUX1P39880 1505 aa31.33■■■□□ 2.61
LINC01006-201ENST00000333319 VPS8Q8N3P4 1428 aa31.25■■■□□ 2.59
LINC01006-201ENST00000333319 RANGAP1P46060 587 aaPredicted RBP31.22■■■□□ 2.59
LINC01006-201ENST00000333319 PRXQ9BXM0 1461 aa31.2■■■□□ 2.58
LINC01006-201ENST00000333319 ERICH3Q5RHP9 1530 aa31.18■■■□□ 2.58
LINC01006-201ENST00000333319 KIF27Q86VH2 1401 aa31.13■■■□□ 2.57
LINC01006-201ENST00000333319 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
LINC01006-201ENST00000333319 APLP2Q06481 763 aa31.1■■■□□ 2.57
LINC01006-201ENST00000333319 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
LINC01006-201ENST00000333319 CC2D2AQ9P2K1 1620 aa31.03■■■□□ 2.56
LINC01006-201ENST00000333319 ARAP1Q96P48 1450 aa30.94■■■□□ 2.54
LINC01006-201ENST00000333319 HNRNPUL2Q1KMD3 747 aaKnown RBP30.93■■■□□ 2.54
LINC01006-201ENST00000333319 CUX2O14529 1486 aa30.87■■■□□ 2.53
LINC01006-201ENST00000333319 FGD5Q6ZNL6 1462 aa30.82■■■□□ 2.52
LINC01006-201ENST00000333319 IGF1RP08069 1367 aa30.81■■■□□ 2.52
LINC01006-201ENST00000333319 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
LINC01006-201ENST00000333319 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
LINC01006-201ENST00000333319 KANK4Q5T7N3 995 aaPredicted RBP30.71■■■□□ 2.51
LINC01006-201ENST00000333319 CARMIL1Q5VZK9 1371 aa30.68■■■□□ 2.5
LINC01006-201ENST00000333319 DIEXFQ68CQ4 756 aaKnown RBP30.61■■■□□ 2.49
LINC01006-201ENST00000333319 NESP48681 1621 aa30.59■■■□□ 2.49
LINC01006-201ENST00000333319 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
LINC01006-201ENST00000333319 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
LINC01006-201ENST00000333319 RAD54L2Q9Y4B4 1467 aa30.52■■■□□ 2.48
LINC01006-201ENST00000333319 ZNF316A6NFI3 1004 aaPredicted RBP30.49■■■□□ 2.47
LINC01006-201ENST00000333319 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
LINC01006-201ENST00000333319 RRBP1Q9P2E9 1410 aaKnown RBP30.48■■■□□ 2.47
LINC01006-201ENST00000333319 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
LINC01006-201ENST00000333319 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
LINC01006-201ENST00000333319 CCNB3Q8WWL7 1395 aa30.36■■■□□ 2.45
LINC01006-201ENST00000333319 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
LINC01006-201ENST00000333319 MAP3K1Q13233 1512 aa30.34■■■□□ 2.45
LINC01006-201ENST00000333319 DHX57Q6P158 1386 aaKnown RBP30.33■■■□□ 2.45
LINC01006-201ENST00000333319 URB2Q14146 1524 aaKnown RBP30.32■■■□□ 2.44
LINC01006-201ENST00000333319 P3H3Q8IVL6 736 aa30.3■■■□□ 2.44
LINC01006-201ENST00000333319 CLSPNQ9HAW4 1339 aa30.29■■■□□ 2.44
LINC01006-201ENST00000333319 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
LINC01006-201ENST00000333319 CUL7Q14999 1698 aa30.28■■■□□ 2.44
LINC01006-201ENST00000333319 SCAF1Q9H7N4 1312 aaKnown RBP30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms