Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 SUB1YMR039C 879 nt3.9□□□□□ -1.79
RPN11P43588 YMR158C-AYMR158C-A 138 nt3.9□□□□□ -1.79
RPN11P43588 MRPL17YNL252C 846 nt3.9□□□□□ -1.79
RPN11P43588 GIS2YNL255C 462 nt3.9□□□□□ -1.79
RPN11P43588 ATP20YPR020W 348 nt3.9□□□□□ -1.79
RPN11P43588 MSS4YDR208W 2340 nt3.9□□□□□ -1.79
RPN11P43588 YPL260WYPL260W 1656 nt3.9□□□□□ -1.79
RPN11P43588 UBP5YER144C 2418 nt3.89□□□□□ -1.79
RPN11P43588 YMR317WYMR317W 3423 nt3.89□□□□□ -1.79
RPN11P43588 snR70snR70 164 nt3.89□□□□□ -1.79
RPN11P43588 SRB7YDR308C 423 nt3.89□□□□□ -1.79
RPN11P43588 YGL242CYGL242C 546 nt3.89□□□□□ -1.79
RPN11P43588 TDA10YGR205W 873 nt3.89□□□□□ -1.79
RPN11P43588 GRC3YLL035W 1899 nt3.89□□□□□ -1.79
RPN11P43588 UTP5YDR398W 1932 nt3.89□□□□□ -1.79
RPN11P43588 ULS1YOR191W 4860 nt3.89□□□□□ -1.79
RPN11P43588 ORC1YML065W 2745 nt3.88□□□□□ -1.79
RPN11P43588 YGL176CYGL176C 1665 nt3.88□□□□□ -1.79
RPN11P43588 NOP6YDL213C 678 nt3.88□□□□□ -1.79
RPN11P43588 RUB1YDR139C 234 nt3.88□□□□□ -1.79
RPN11P43588 YFL051CYFL051C 483 nt3.88□□□□□ -1.79
RPN11P43588 RSM27YGR215W 333 nt3.88□□□□□ -1.79
RPN11P43588 YHR052W-AYHR052W-A 195 nt3.88□□□□□ -1.79
RPN11P43588 YHR054W-AYHR054W-A 195 nt3.88□□□□□ -1.79
RPN11P43588 SVP26YHR181W 687 nt3.88□□□□□ -1.79
RPN11P43588 UTP23YOR004W 765 nt3.88□□□□□ -1.79
RPN11P43588 SUR1YPL057C 1149 nt3.88□□□□□ -1.79
RPN11P43588 RPL36BYPL249C-A 303 nt3.88□□□□□ -1.79
RPN11P43588 PRP28YDR243C 1767 nt3.88□□□□□ -1.79
RPN11P43588 BI3Q0115 1554 nt3.88□□□□□ -1.79
RPN11P43588 MLH2YLR035C 2088 nt3.88□□□□□ -1.79
RPN11P43588 RIM21YNL294C 1602 nt3.88□□□□□ -1.79
RPN11P43588 MDN1YLR106C 14733 nt3.87□□□□□ -1.79
RPN11P43588 UBC9YDL064W 474 nt3.87□□□□□ -1.79
RPN11P43588 BTN2YGR142W 1233 nt3.87□□□□□ -1.79
RPN11P43588 YAL004WYAL004W 648 nt3.87□□□□□ -1.79
RPN11P43588 YJL032WYJL032W 315 nt3.87□□□□□ -1.79
RPN11P43588 YAR075WYAR075W 474 nt3.87□□□□□ -1.79
RPN11P43588 ERV15YBR210W 429 nt3.87□□□□□ -1.79
RPN11P43588 VPS27YNR006W 1869 nt3.87□□□□□ -1.79
RPN11P43588 DSE1YER124C 1722 nt3.87□□□□□ -1.79
RPN11P43588 APM3YBR288C 1452 nt3.86□□□□□ -1.79
RPN11P43588 AEP3YPL005W 1821 nt3.86□□□□□ -1.79
RPN11P43588 BCD1YHR040W 1101 nt3.86□□□□□ -1.79
RPN11P43588 DOG1YHR044C 741 nt3.86□□□□□ -1.79
RPN11P43588 RCN1YKL159C 636 nt3.86□□□□□ -1.79
RPN11P43588 PIR1YKL164C 1026 nt3.86□□□□□ -1.79
RPN11P43588 PCD1YLR151C 1023 nt3.86□□□□□ -1.79
RPN11P43588 GLO1YML004C 981 nt3.86□□□□□ -1.79
RPN11P43588 YOR186WYOR186W 435 nt3.86□□□□□ -1.79
RPN11P43588 CAF20YOR276W 486 nt3.86□□□□□ -1.79
RPN11P43588 YBR096WYBR096W 693 nt3.86□□□□□ -1.79
RPN11P43588 YBR287WYBR287W 1284 nt3.86□□□□□ -1.79
RPN11P43588 CTP1YBR291C 900 nt3.86□□□□□ -1.79
RPN11P43588 UBP12YJL197W 3765 nt3.85□□□□□ -1.79
RPN11P43588 SDS23YGL056C 1584 nt3.85□□□□□ -1.79
RPN11P43588 ALO1YML086C 1581 nt3.85□□□□□ -1.79
RPN11P43588 RGC1YPR115W 3252 nt3.85□□□□□ -1.79
RPN11P43588 DNM1YLL001W 2274 nt3.85□□□□□ -1.79
RPN11P43588 RPS18AYDR450W 441 nt3.85□□□□□ -1.79
RPN11P43588 YHL034W-AYHL034W-A 462 nt3.85□□□□□ -1.79
RPN11P43588 IKI1YHR187W 930 nt3.85□□□□□ -1.79
RPN11P43588 REE1YJL217W 597 nt3.85□□□□□ -1.79
RPN11P43588 TPD3YAL016W 1908 nt3.85□□□□□ -1.79
RPN11P43588 VMA1YDL185W 3216 nt3.85□□□□□ -1.79
RPN11P43588 RPA190YOR341W 4995 nt3.84□□□□□ -1.79
RPN11P43588 NHX1YDR456W 1902 nt3.84□□□□□ -1.79
RPN11P43588 HTB1YDR224C 396 nt3.84□□□□□ -1.79
RPN11P43588 PEF1YGR058W 1008 nt3.84□□□□□ -1.79
RPN11P43588 YKL222CYKL222C 2118 nt3.84□□□□□ -1.79
RPN11P43588 YLR290CYLR290C 834 nt3.84□□□□□ -1.79
RPN11P43588 CSI1YMR025W 888 nt3.84□□□□□ -1.79
RPN11P43588 FOL3YMR113W 1284 nt3.84□□□□□ -1.79
RPN11P43588 NOC2YOR206W 2133 nt3.84□□□□□ -1.79
RPN11P43588 SPR2YOR214C 711 nt3.84□□□□□ -1.79
RPN11P43588 MGE1YOR232W 687 nt3.84□□□□□ -1.79
RPN11P43588 CIN2YPL241C 807 nt3.84□□□□□ -1.79
RPN11P43588 NTH1YDR001C 2256 nt3.84□□□□□ -1.79
RPN11P43588 MGA1YGR249W 1371 nt3.84□□□□□ -1.79
RPN11P43588 MSN4YKL062W 1893 nt3.84□□□□□ -1.8
RPN11P43588 PIM1YBL022C 3402 nt3.83□□□□□ -1.8
RPN11P43588 VTC4YJL012C 2166 nt3.83□□□□□ -1.8
RPN11P43588 GRX3YDR098C 858 nt3.83□□□□□ -1.8
RPN11P43588 RSM25YIL093C 795 nt3.83□□□□□ -1.8
RPN11P43588 PET130YJL023C 1044 nt3.83□□□□□ -1.8
RPN11P43588 YOR082CYOR082C 342 nt3.83□□□□□ -1.8
RPN11P43588 ARL3YPL051W 597 nt3.83□□□□□ -1.8
RPN11P43588 IDI1YPL117C 867 nt3.83□□□□□ -1.8
RPN11P43588 PIN3YPR154W 648 nt3.83□□□□□ -1.8
RPN11P43588 MTL1YGR023W 1656 nt3.83□□□□□ -1.8
RPN11P43588 YPL109CYPL109C 1974 nt3.83□□□□□ -1.8
RPN11P43588 ARP9YMR033W 1404 nt3.82□□□□□ -1.8
RPN11P43588 snR83snR83 306 nt3.82□□□□□ -1.8
RPN11P43588 PET100YDR079W 336 nt3.82□□□□□ -1.8
RPN11P43588 SLX8YER116C 825 nt3.82□□□□□ -1.8
RPN11P43588 SFH1YLR321C 1281 nt3.82□□□□□ -1.8
RPN11P43588 TPT1YOL102C 693 nt3.82□□□□□ -1.8
RPN11P43588 PPT2YPL148C 522 nt3.82□□□□□ -1.8
RPN11P43588 CBP3YPL215W 1008 nt3.82□□□□□ -1.8
RPN11P43588 TAF1YGR274C 3201 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 57.7 ms