RNA–Protein interactions for RNA: YDR208W

MSS4, Transcript of Phosphatidylinositol-4-phosphate 5-kinase, yeastyeast

Gene MSS4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS4YDR208W DRS1P32892 752 aaKnown RBP10.26□□□□□ -0.77
MSS4YDR208W MTC1P47018 478 aaKnown RBP9.82□□□□□ -0.84
MSS4YDR208W BFR2Q06631 534 aaKnown RBP9.05□□□□□ -0.96
MSS4YDR208W TFA1P36100 482 aa8.91□□□□□ -0.98
MSS4YDR208W AVT3P36062 692 aa8.7□□□□□ -1.02
MSS4YDR208W DIP2Q12220 943 aaPredicted RBP8.6□□□□□ -1.03
MSS4YDR208W RSE1Q04693 1361 aaKnown RBP7.95□□□□□ -1.14
MSS4YDR208W RQC2Q12532 1038 aaKnown RBP7.81□□□□□ -1.16
MSS4YDR208W ISW2Q08773 1120 aa7.8□□□□□ -1.16
MSS4YDR208W RPG1P38249 964 aaKnown RBP7.73□□□□□ -1.17
MSS4YDR208W PRI1P10363 409 aa7.65□□□□□ -1.18
MSS4YDR208W RPL17AP05740 184 aaKnown RBP7.63□□□□□ -1.19
MSS4YDR208W RPL17BP46990 184 aaKnown RBP7.63□□□□□ -1.19
MSS4YDR208W SPT21P35209 758 aa7.52□□□□□ -1.21
MSS4YDR208W DMA1P38823 416 aa7.49□□□□□ -1.21
MSS4YDR208W RIM101P33400 625 aa7.49□□□□□ -1.21
MSS4YDR208W REB1P21538 810 aa7.45□□□□□ -1.22
MSS4YDR208W PTP3P40048 928 aa7.42□□□□□ -1.22
MSS4YDR208W FAP1P53971 965 aa7.42□□□□□ -1.22
MSS4YDR208W AAD16Q02895 342 aa7.39□□□□□ -1.23
MSS4YDR208W SSP1P38871 571 aa7.29□□□□□ -1.24
MSS4YDR208W OXP1P28273 1286 aa7.29□□□□□ -1.24
MSS4YDR208W TSR3Q12094 313 aaKnown RBP7.25□□□□□ -1.25
MSS4YDR208W YKR023WP36119 530 aaKnown RBP7.16□□□□□ -1.26
MSS4YDR208W YLR271WQ06152 274 aa7.15□□□□□ -1.26
MSS4YDR208W TAF7Q05021 590 aa7.12□□□□□ -1.27
MSS4YDR208W YAH1Q12184 172 aaKnown RBP7.11□□□□□ -1.27
MSS4YDR208W LEO1P38439 464 aa7.05□□□□□ -1.28
MSS4YDR208W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
MSS4YDR208W SAS10Q12136 610 aaPredicted RBP7.03□□□□□ -1.28
MSS4YDR208W YIL055CP40523 627 aaKnown RBP7.02□□□□□ -1.29
MSS4YDR208W MGA2P40578 1113 aa6.99□□□□□ -1.29
MSS4YDR208W TFC8Q12308 588 aa6.99□□□□□ -1.29
MSS4YDR208W RSM7P47150 247 aa6.98□□□□□ -1.29
MSS4YDR208W CST9Q06032 482 aa6.96□□□□□ -1.29
MSS4YDR208W HOP09932 586 aa6.95□□□□□ -1.3
MSS4YDR208W PRY3P47033 881 aa6.94□□□□□ -1.3
MSS4YDR208W DCD1P06773 312 aa6.93□□□□□ -1.3
MSS4YDR208W PSD2P53037 1138 aaKnown RBP6.92□□□□□ -1.3
MSS4YDR208W LEU3P08638 886 aa6.9□□□□□ -1.3
MSS4YDR208W MRPL32P25348 183 aa6.89□□□□□ -1.31
MSS4YDR208W CDC27P38042 758 aa6.89□□□□□ -1.31
MSS4YDR208W AI2P03876 854 aa6.84□□□□□ -1.31
MSS4YDR208W YCK3P39962 524 aa6.83□□□□□ -1.32
MSS4YDR208W BCH2P36122 765 aa6.81□□□□□ -1.32
MSS4YDR208W RAM2P29703 316 aa6.77□□□□□ -1.33
MSS4YDR208W RCR1P38212 213 aa6.71□□□□□ -1.33
MSS4YDR208W EPS1P40557 701 aa6.69□□□□□ -1.34
MSS4YDR208W BBC1P47068 1157 aa6.68□□□□□ -1.34
MSS4YDR208W YPR148CQ06523 435 aa6.68□□□□□ -1.34
MSS4YDR208W SET1P38827 1080 aaKnown RBP6.66□□□□□ -1.34
MSS4YDR208W BDF1P35817 686 aa6.66□□□□□ -1.34
MSS4YDR208W MRM1P25270 412 aa6.65□□□□□ -1.35
MSS4YDR208W RPN1P38764 993 aaKnown RBP6.63□□□□□ -1.35
MSS4YDR208W DMA2P53924 522 aa6.59□□□□□ -1.36
MSS4YDR208W HAA1Q12753 694 aaKnown RBP6.58□□□□□ -1.36
MSS4YDR208W MAK11P20484 414 aaKnown RBP6.58□□□□□ -1.36
MSS4YDR208W RTG3P38165 486 aa6.58□□□□□ -1.36
MSS4YDR208W VPS70P47161 811 aa6.58□□□□□ -1.36
MSS4YDR208W CKB1P43639 278 aa6.57□□□□□ -1.36
MSS4YDR208W ABP1P15891 592 aaKnown RBP6.56□□□□□ -1.36
MSS4YDR208W VPS29P38759 282 aa6.55□□□□□ -1.36
MSS4YDR208W SCY1P53009 804 aa6.54□□□□□ -1.36
MSS4YDR208W IFH1P39520 1085 aa6.53□□□□□ -1.36
MSS4YDR208W SPB4P25808 606 aaPredicted RBP6.53□□□□□ -1.36
MSS4YDR208W DSF2P38213 736 aa6.52□□□□□ -1.37
MSS4YDR208W MAP2P38174 421 aaKnown RBP6.5□□□□□ -1.37
MSS4YDR208W COQ8P27697 501 aa6.48□□□□□ -1.37
MSS4YDR208W UBP10P53874 792 aaPredicted RBP6.47□□□□□ -1.37
MSS4YDR208W PBS2P08018 668 aa6.46□□□□□ -1.38
MSS4YDR208W STS1P38637 319 aa6.44□□□□□ -1.38
MSS4YDR208W EDS1P38073 919 aa6.43□□□□□ -1.38
MSS4YDR208W NOP53Q12080 455 aaKnown RBP6.42□□□□□ -1.38
MSS4YDR208W YNR021WP53723 404 aaKnown RBP6.41□□□□□ -1.38
MSS4YDR208W NUP42P49686 430 aaKnown RBP6.39□□□□□ -1.39
MSS4YDR208W YMR1P47147 688 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
MSS4YDR208W KIN1P13185 1064 aa6.38□□□□□ -1.39
MSS4YDR208W DIT2P21595 489 aa6.36□□□□□ -1.39
MSS4YDR208W SLX5P32828 619 aaKnown RBP6.36□□□□□ -1.39
MSS4YDR208W REF2P42073 533 aaPredicted RBP6.36□□□□□ -1.39
MSS4YDR208W AIM7Q12156 149 aa6.36□□□□□ -1.39
MSS4YDR208W RLF2Q12495 606 aa6.36□□□□□ -1.39
MSS4YDR208W DBP1P24784 617 aaKnown RBP6.35□□□□□ -1.39
MSS4YDR208W GLC3P32775 704 aa6.35□□□□□ -1.39
MSS4YDR208W MAM3Q12296 706 aa6.35□□□□□ -1.39
MSS4YDR208W MIF2P35201 549 aa6.34□□□□□ -1.39
MSS4YDR208W IES2P40154 320 aa6.33□□□□□ -1.4
MSS4YDR208W YFR006WP43590 535 aa6.33□□□□□ -1.4
MSS4YDR208W PTC3P34221 468 aaKnown RBP6.32□□□□□ -1.4
MSS4YDR208W COX6P00427 148 aa6.31□□□□□ -1.4
MSS4YDR208W YGL015CP33199 130 aa6.31□□□□□ -1.4
MSS4YDR208W GUA1P38625 525 aaKnown RBP6.29□□□□□ -1.4
MSS4YDR208W YOR238WQ08634 303 aa6.29□□□□□ -1.4
MSS4YDR208W YDR090CQ03193 310 aa6.28□□□□□ -1.4
MSS4YDR208W MAK21Q12176 1025 aaKnown RBP6.27□□□□□ -1.41
MSS4YDR208W NSR1P27476 414 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
MSS4YDR208W UBP14P38237 781 aaKnown RBP6.26□□□□□ -1.41
MSS4YDR208W VMA1P17255 1071 aaKnown RBP6.22□□□□□ -1.41
MSS4YDR208W YLR326WQ06170 240 aaKnown RBP6.21□□□□□ -1.41
MSS4YDR208W PIB1Q06651 286 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms