RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeastyeast

Gene NOP6, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP6YDL213C MTC1P47018 478 aaKnown RBP10.79□□□□□ -0.68
NOP6YDL213C FAP1P53971 965 aa10.66□□□□□ -0.7
NOP6YDL213C PRY3P47033 881 aa10.06□□□□□ -0.8
NOP6YDL213C AAD16Q02895 342 aa9.49□□□□□ -0.89
NOP6YDL213C PRI1P10363 409 aa9.47□□□□□ -0.89
NOP6YDL213C DRS1P32892 752 aaKnown RBP9.43□□□□□ -0.9
NOP6YDL213C YCK3P39962 524 aa9.42□□□□□ -0.9
NOP6YDL213C HAA1Q12753 694 aaKnown RBP9.36□□□□□ -0.91
NOP6YDL213C ISW2Q08773 1120 aa9.06□□□□□ -0.96
NOP6YDL213C RPG1P38249 964 aaKnown RBP9.02□□□□□ -0.97
NOP6YDL213C TSR3Q12094 313 aaKnown RBP8.92□□□□□ -0.98
NOP6YDL213C MRPL32P25348 183 aa8.56□□□□□ -1.04
NOP6YDL213C DIP2Q12220 943 aaPredicted RBP8.52□□□□□ -1.05
NOP6YDL213C YGL015CP33199 130 aa8.45□□□□□ -1.06
NOP6YDL213C RSE1Q04693 1361 aaKnown RBP8.39□□□□□ -1.07
NOP6YDL213C BUD31P25337 157 aaPredicted RBP8.36□□□□□ -1.07
NOP6YDL213C REB1P21538 810 aa8.18□□□□□ -1.1
NOP6YDL213C RPL17AP05740 184 aaKnown RBP8.17□□□□□ -1.1
NOP6YDL213C RPL17BP46990 184 aaKnown RBP8.17□□□□□ -1.1
NOP6YDL213C AVT3P36062 692 aa8.04□□□□□ -1.12
NOP6YDL213C CDC27P38042 758 aa8.04□□□□□ -1.12
NOP6YDL213C YKR023WP36119 530 aaKnown RBP7.87□□□□□ -1.15
NOP6YDL213C TFA1P36100 482 aa7.86□□□□□ -1.15
NOP6YDL213C UBP10P53874 792 aaPredicted RBP7.86□□□□□ -1.15
NOP6YDL213C MAP2P38174 421 aaKnown RBP7.85□□□□□ -1.15
NOP6YDL213C SPT21P35209 758 aa7.78□□□□□ -1.16
NOP6YDL213C SIS1P25294 352 aaKnown RBP7.76□□□□□ -1.17
NOP6YDL213C BFR2Q06631 534 aaKnown RBP7.7□□□□□ -1.18
NOP6YDL213C TFC8Q12308 588 aa7.7□□□□□ -1.18
NOP6YDL213C HOP09932 586 aa7.69□□□□□ -1.18
NOP6YDL213C DCD1P06773 312 aa7.68□□□□□ -1.18
NOP6YDL213C UBP9P39967 754 aa7.59□□□□□ -1.19
NOP6YDL213C RQC2Q12532 1038 aaKnown RBP7.58□□□□□ -1.2
NOP6YDL213C SCY1P53009 804 aa7.56□□□□□ -1.2
NOP6YDL213C TGL3P40308 642 aa7.54□□□□□ -1.2
NOP6YDL213C TIF4632P39936 914 aaKnown RBP7.53□□□□□ -1.2
NOP6YDL213C SLX5P32828 619 aaKnown RBP7.5□□□□□ -1.21
NOP6YDL213C BCH2P36122 765 aa7.43□□□□□ -1.22
NOP6YDL213C RIM101P33400 625 aa7.39□□□□□ -1.23
NOP6YDL213C TAF7Q05021 590 aa7.22□□□□□ -1.25
NOP6YDL213C BDF1P35817 686 aa7.18□□□□□ -1.26
NOP6YDL213C MST1P07236 462 aa7.17□□□□□ -1.26
NOP6YDL213C EPS1P40557 701 aa7.17□□□□□ -1.26
NOP6YDL213C OXP1P28273 1286 aa7.13□□□□□ -1.27
NOP6YDL213C YBL029C-AQ3E756 94 aa7.12□□□□□ -1.27
NOP6YDL213C YOR238WQ08634 303 aa7.09□□□□□ -1.27
NOP6YDL213C VNX1P42839 908 aa7.04□□□□□ -1.28
NOP6YDL213C NSR1P27476 414 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
NOP6YDL213C PTP3P40048 928 aa6.99□□□□□ -1.29
NOP6YDL213C YIL055CP40523 627 aaKnown RBP6.99□□□□□ -1.29
NOP6YDL213C SPP1Q03012 353 aa6.94□□□□□ -1.3
NOP6YDL213C YAP5P40574 245 aa6.93□□□□□ -1.3
NOP6YDL213C BBC1P47068 1157 aa6.91□□□□□ -1.3
NOP6YDL213C RSM7P47150 247 aa6.91□□□□□ -1.3
NOP6YDL213C WSC3Q12215 556 aa6.91□□□□□ -1.3
NOP6YDL213C AI2P03876 854 aa6.89□□□□□ -1.31
NOP6YDL213C AIR2Q12476 344 aaKnown RBP6.89□□□□□ -1.31
NOP6YDL213C YJL171CP46992 396 aa6.88□□□□□ -1.31
NOP6YDL213C TIF11P38912 153 aaKnown RBP6.85□□□□□ -1.31
NOP6YDL213C FKH1P40466 484 aa6.83□□□□□ -1.32
NOP6YDL213C YAH1Q12184 172 aaKnown RBP6.79□□□□□ -1.32
NOP6YDL213C GTT3P39996 337 aa6.78□□□□□ -1.32
NOP6YDL213C DMA1P38823 416 aa6.76□□□□□ -1.33
NOP6YDL213C IOC2Q12072 812 aa6.75□□□□□ -1.33
NOP6YDL213C ULI1P43604 169 aa6.74□□□□□ -1.33
NOP6YDL213C LDB19Q12502 818 aa6.74□□□□□ -1.33
NOP6YDL213C PIB1Q06651 286 aa6.7□□□□□ -1.34
NOP6YDL213C YLR271WQ06152 274 aa6.69□□□□□ -1.34
NOP6YDL213C BMT6Q12291 365 aa6.69□□□□□ -1.34
NOP6YDL213C LEO1P38439 464 aa6.67□□□□□ -1.34
NOP6YDL213C PSD2P53037 1138 aaKnown RBP6.65□□□□□ -1.34
NOP6YDL213C MSB4Q12317 492 aa6.62□□□□□ -1.35
NOP6YDL213C MRM1P25270 412 aa6.6□□□□□ -1.35
NOP6YDL213C EAP1P36041 632 aaKnown RBP6.59□□□□□ -1.35
NOP6YDL213C RTG1P32607 177 aa6.57□□□□□ -1.36
NOP6YDL213C TRP5P00931 707 aaKnown RBP6.56□□□□□ -1.36
NOP6YDL213C NCR1Q12200 1170 aa6.56□□□□□ -1.36
NOP6YDL213C SET4P42948 560 aa6.55□□□□□ -1.36
NOP6YDL213C YOL036WQ08206 761 aa6.55□□□□□ -1.36
NOP6YDL213C VPS29P38759 282 aa6.51□□□□□ -1.37
NOP6YDL213C DBP1P24784 617 aaKnown RBP6.5□□□□□ -1.37
NOP6YDL213C SEC61P32915 480 aa6.5□□□□□ -1.37
NOP6YDL213C YMR1P47147 688 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37 RIP-Chip
NOP6YDL213C YNL035CP53962 389 aaKnown RBP6.5□□□□□ -1.37
NOP6YDL213C RGA2Q06407 1009 aa6.48□□□□□ -1.37
NOP6YDL213C YFR006WP43590 535 aa6.46□□□□□ -1.38
NOP6YDL213C VMA1P17255 1071 aaKnown RBP6.45□□□□□ -1.38
NOP6YDL213C SAM3Q08986 587 aa6.45□□□□□ -1.38
NOP6YDL213C STS1P38637 319 aa6.43□□□□□ -1.38
NOP6YDL213C RTG3P38165 486 aa6.42□□□□□ -1.38
NOP6YDL213C SSP1P38871 571 aa6.42□□□□□ -1.38
NOP6YDL213C CST9Q06032 482 aa6.41□□□□□ -1.38
NOP6YDL213C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
NOP6YDL213C DAN4P47179 1161 aa6.4□□□□□ -1.38
NOP6YDL213C TFG1P41895 735 aaPredicted RBP6.39□□□□□ -1.39
NOP6YDL213C SAP30P38429 201 aa6.38□□□□□ -1.39
NOP6YDL213C JIP4Q03361 876 aa6.36□□□□□ -1.39
NOP6YDL213C CHL1P22516 861 aaPredicted RBP6.34□□□□□ -1.39
NOP6YDL213C BCK2P33306 851 aa6.34□□□□□ -1.39
NOP6YDL213C MGA2P40578 1113 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms