RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeastyeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS23YGL056C MTC1P47018 478 aaKnown RBP12.73□□□□□ -0.37
SDS23YGL056C FAP1P53971 965 aa12.73□□□□□ -0.37
SDS23YGL056C PRY3P47033 881 aa12.03□□□□□ -0.48
SDS23YGL056C AAD16Q02895 342 aa11.5□□□□□ -0.57
SDS23YGL056C PRI1P10363 409 aa11.41□□□□□ -0.58
SDS23YGL056C YCK3P39962 524 aa11.41□□□□□ -0.58
SDS23YGL056C HAA1Q12753 694 aaKnown RBP11.26□□□□□ -0.61
SDS23YGL056C ISW2Q08773 1120 aa10.79□□□□□ -0.68
SDS23YGL056C RPG1P38249 964 aaKnown RBP10.73□□□□□ -0.69
SDS23YGL056C TSR3Q12094 313 aaKnown RBP10.69□□□□□ -0.7
SDS23YGL056C DRS1P32892 752 aaKnown RBP10.67□□□□□ -0.7
SDS23YGL056C MRPL32P25348 183 aa10.29□□□□□ -0.76
SDS23YGL056C YGL015CP33199 130 aa10.22□□□□□ -0.77
SDS23YGL056C BUD31P25337 157 aaPredicted RBP9.9□□□□□ -0.82
SDS23YGL056C DIP2Q12220 943 aaPredicted RBP9.81□□□□□ -0.84
SDS23YGL056C RSE1Q04693 1361 aaKnown RBP9.81□□□□□ -0.84
SDS23YGL056C REB1P21538 810 aa9.62□□□□□ -0.87
SDS23YGL056C CDC27P38042 758 aa9.58□□□□□ -0.88
SDS23YGL056C RPL17AP05740 184 aaKnown RBP9.56□□□□□ -0.88
SDS23YGL056C RPL17BP46990 184 aaKnown RBP9.56□□□□□ -0.88
SDS23YGL056C UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.89
SDS23YGL056C MAP2P38174 421 aaKnown RBP9.4□□□□□ -0.9
SDS23YGL056C YKR023WP36119 530 aaKnown RBP9.29□□□□□ -0.92
SDS23YGL056C SIS1P25294 352 aaKnown RBP9.28□□□□□ -0.92
SDS23YGL056C AVT3P36062 692 aa9.16□□□□□ -0.94
SDS23YGL056C UBP9P39967 754 aa9.14□□□□□ -0.95
SDS23YGL056C SPT21P35209 758 aa9.11□□□□□ -0.95
SDS23YGL056C TGL3P40308 642 aa9.09□□□□□ -0.95
SDS23YGL056C TFC8Q12308 588 aa9.08□□□□□ -0.96
SDS23YGL056C TIF4632P39936 914 aaKnown RBP9.07□□□□□ -0.96
SDS23YGL056C HOP09932 586 aa9.05□□□□□ -0.96
SDS23YGL056C DCD1P06773 312 aa9.03□□□□□ -0.96
SDS23YGL056C SCY1P53009 804 aa8.99□□□□□ -0.97
SDS23YGL056C SLX5P32828 619 aaKnown RBP8.95□□□□□ -0.98
SDS23YGL056C BFR2Q06631 534 aaKnown RBP8.86□□□□□ -0.99
SDS23YGL056C TFA1P36100 482 aa8.73□□□□□ -1.01
SDS23YGL056C BCH2P36122 765 aa8.73□□□□□ -1.01
SDS23YGL056C MST1P07236 462 aa8.6□□□□□ -1.03
SDS23YGL056C YBL029C-AQ3E756 94 aa8.57□□□□□ -1.04
SDS23YGL056C RIM101P33400 625 aa8.54□□□□□ -1.04
SDS23YGL056C VNX1P42839 908 aa8.47□□□□□ -1.05
SDS23YGL056C YOR238WQ08634 303 aa8.45□□□□□ -1.06
SDS23YGL056C BDF1P35817 686 aa8.43□□□□□ -1.06
SDS23YGL056C EPS1P40557 701 aa8.42□□□□□ -1.06
SDS23YGL056C SPP1Q03012 353 aa8.35□□□□□ -1.07
SDS23YGL056C AIR2Q12476 344 aaKnown RBP8.35□□□□□ -1.07
SDS23YGL056C NSR1P27476 414 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SDS23YGL056C YJL171CP46992 396 aa8.28□□□□□ -1.08
SDS23YGL056C FKH1P40466 484 aa8.27□□□□□ -1.09
SDS23YGL056C WSC3Q12215 556 aa8.25□□□□□ -1.09
SDS23YGL056C YAP5P40574 245 aa8.22□□□□□ -1.09
SDS23YGL056C OXP1P28273 1286 aa8.21□□□□□ -1.1
SDS23YGL056C TIF11P38912 153 aaKnown RBP8.21□□□□□ -1.1
SDS23YGL056C BMT6Q12291 365 aa8.1□□□□□ -1.11
SDS23YGL056C LDB19Q12502 818 aa8.08□□□□□ -1.12
SDS23YGL056C PTP3P40048 928 aa8.06□□□□□ -1.12
SDS23YGL056C IOC2Q12072 812 aa8.06□□□□□ -1.12
SDS23YGL056C BBC1P47068 1157 aa8.05□□□□□ -1.12
SDS23YGL056C GTT3P39996 337 aa8.04□□□□□ -1.12
SDS23YGL056C YIL055CP40523 627 aaKnown RBP8.04□□□□□ -1.12
SDS23YGL056C ULI1P43604 169 aa8.03□□□□□ -1.12
SDS23YGL056C AI2P03876 854 aa7.97□□□□□ -1.13
SDS23YGL056C RSM7P47150 247 aa7.97□□□□□ -1.13
SDS23YGL056C RQC2Q12532 1038 aaKnown RBP7.9□□□□□ -1.14
SDS23YGL056C MSB4Q12317 492 aa7.86□□□□□ -1.15
SDS23YGL056C EAP1P36041 632 aaKnown RBP7.84□□□□□ -1.15
SDS23YGL056C RTG1P32607 177 aa7.84□□□□□ -1.15
SDS23YGL056C PIB1Q06651 286 aa7.84□□□□□ -1.15
SDS23YGL056C NCR1Q12200 1170 aa7.82□□□□□ -1.16
SDS23YGL056C TRP5P00931 707 aaKnown RBP7.77□□□□□ -1.17
SDS23YGL056C SEC61P32915 480 aa7.75□□□□□ -1.17
SDS23YGL056C YNL035CP53962 389 aaKnown RBP7.74□□□□□ -1.17
SDS23YGL056C YAH1Q12184 172 aaKnown RBP7.74□□□□□ -1.17
SDS23YGL056C YOL036WQ08206 761 aa7.73□□□□□ -1.17
SDS23YGL056C SET4P42948 560 aa7.71□□□□□ -1.17
SDS23YGL056C BCK2P33306 851 aa7.67□□□□□ -1.18
SDS23YGL056C PSD2P53037 1138 aaKnown RBP7.64□□□□□ -1.19
SDS23YGL056C YLR271WQ06152 274 aa7.62□□□□□ -1.19
SDS23YGL056C MRM1P25270 412 aa7.61□□□□□ -1.19
SDS23YGL056C TFG1P41895 735 aaPredicted RBP7.6□□□□□ -1.19
SDS23YGL056C CHL1P22516 861 aaPredicted RBP7.59□□□□□ -1.19
SDS23YGL056C SAP30P38429 201 aa7.59□□□□□ -1.2
SDS23YGL056C DAN4P47179 1161 aa7.57□□□□□ -1.2
SDS23YGL056C SAM3Q08986 587 aa7.56□□□□□ -1.2
SDS23YGL056C YMR1P47147 688 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
SDS23YGL056C DBP1P24784 617 aaKnown RBP7.54□□□□□ -1.2
SDS23YGL056C VMA1P17255 1071 aaKnown RBP7.53□□□□□ -1.2
SDS23YGL056C PRE3P38624 215 aa7.53□□□□□ -1.2
SDS23YGL056C VPS29P38759 282 aa7.52□□□□□ -1.21
SDS23YGL056C YDL129WQ07555 291 aa7.52□□□□□ -1.21
SDS23YGL056C JIP4Q03361 876 aa7.51□□□□□ -1.21
SDS23YGL056C RGA2Q06407 1009 aa7.49□□□□□ -1.21
SDS23YGL056C YFR006WP43590 535 aa7.48□□□□□ -1.21
SDS23YGL056C XDJ1P39102 459 aa7.46□□□□□ -1.22
SDS23YGL056C STS1P38637 319 aa7.45□□□□□ -1.22
SDS23YGL056C ABP1P15891 592 aaKnown RBP7.41□□□□□ -1.22
SDS23YGL056C DMA1P38823 416 aa7.41□□□□□ -1.22
SDS23YGL056C VRP1P37370 817 aa7.4□□□□□ -1.22
SDS23YGL056C RTG3P38165 486 aa7.39□□□□□ -1.23
SDS23YGL056C PTC4P38089 393 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 212.4 ms