RNA–Protein interactions for RNA: YOR191W

ULS1, Transcript of Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL), yeast

Gene ULS1, Length 4,860 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULS1	YOR191W	RQC2	Q12532	1038 aa	Known RBP	6.26	□□□□□ -1.41
ULS1	YOR191W	BFR2	Q06631	534 aa	Known RBP	5.91	□□□□□ -1.46
ULS1	YOR191W	NOP2	P40991	618 aa	Known RBP	5.71	□□□□□ -1.49
ULS1	YOR191W	MNN4	P36044	1178 aa		5.7	□□□□□ -1.5
ULS1	YOR191W	CAB3	P36076	571 aa		5.69	□□□□□ -1.5
ULS1	YOR191W	EBP2	P36049	427 aa	Known RBP	5.48	□□□□□ -1.53
ULS1	YOR191W	TAF7	Q05021	590 aa		5.43	□□□□□ -1.54
ULS1	YOR191W	QCR6	P00127	147 aa		5.43	□□□□□ -1.54
ULS1	YOR191W	AIM44	Q99299	758 aa		5.39	□□□□□ -1.55
ULS1	YOR191W	FUN12	P39730	1002 aa	Known RBP	5.29	□□□□□ -1.56
ULS1	YOR191W	EAF7	P53911	425 aa	Known RBP	5.28	□□□□□ -1.56
ULS1	YOR191W	RNA1	P11745	407 aa	Known RBP	5.27	□□□□□ -1.57
ULS1	YOR191W	DRS1	P32892	752 aa	Known RBP	5.27	□□□□□ -1.57
ULS1	YOR191W	RIX1	P38883	763 aa	Predicted RBP	5.25	□□□□□ -1.57
ULS1	YOR191W	SIS2	P36024	562 aa		5.25	□□□□□ -1.57
ULS1	YOR191W	YRB30	P53107	440 aa	Predicted RBP	5.24	□□□□□ -1.57
ULS1	YOR191W	ENP1	P38333	483 aa	Known RBP	5.24	□□□□□ -1.57
ULS1	YOR191W	RPS0B	P46654	252 aa	Known RBP	5.23	□□□□□ -1.57
ULS1	YOR191W	SKI3	P17883	1432 aa	Known RBP	5.23	□□□□□ -1.57
ULS1	YOR191W	LEO1	P38439	464 aa		5.19	□□□□□ -1.58
ULS1	YOR191W	TFA1	P36100	482 aa		5.18	□□□□□ -1.58
ULS1	YOR191W	POL5	P39985	1022 aa	Known RBP	5.17	□□□□□ -1.58
ULS1	YOR191W	DEF1	P35732	738 aa	Known RBP	5.14	□□□□□ -1.59
ULS1	YOR191W	FPR3	P38911	411 aa	Known RBP	5.14	□□□□□ -1.59
ULS1	YOR191W	SEC3	P33332	1336 aa	Known RBP	5.13	□□□□□ -1.59
ULS1	YOR191W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
ULS1	YOR191W	TCB2	P48231	1178 aa		5.13	□□□□□ -1.59
ULS1	YOR191W	URN1	Q06525	465 aa	Known RBP	5.11	□□□□□ -1.59
ULS1	YOR191W	SPA2	P23201	1466 aa	Known RBP	5.1	□□□□□ -1.59
ULS1	YOR191W	HSP82	P02829	709 aa	Known RBP	5.08	□□□□□ -1.6
ULS1	YOR191W	CLC1	P17891	233 aa		5.08	□□□□□ -1.6
ULS1	YOR191W	SAS10	Q12136	610 aa	Predicted RBP	5.07	□□□□□ -1.6
ULS1	YOR191W	FPR4	Q06205	392 aa	Predicted RBP	5.06	□□□□□ -1.6
ULS1	YOR191W	YPR148C	Q06523	435 aa		5.05	□□□□□ -1.6
ULS1	YOR191W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
ULS1	YOR191W	SPT2	P06843	333 aa	Predicted RBP	5.03	□□□□□ -1.6
ULS1	YOR191W	SCT1	P32784	759 aa		5.03	□□□□□ -1.6
ULS1	YOR191W	YFR016C	P43597	1233 aa	Known RBP	5.03	□□□□□ -1.6
ULS1	YOR191W	RLF2	Q12495	606 aa		5.01	□□□□□ -1.61
ULS1	YOR191W	ASF1	P32447	279 aa		5	□□□□□ -1.61
ULS1	YOR191W	SGS1	P35187	1447 aa		4.99	□□□□□ -1.61
ULS1	YOR191W	PSH1	Q12161	406 aa		4.99	□□□□□ -1.61
ULS1	YOR191W	NOP58	Q12499	511 aa	Known RBP	4.97	□□□□□ -1.61
ULS1	YOR191W	TCB3	Q03640	1545 aa	Known RBP	4.97	□□□□□ -1.61
ULS1	YOR191W	ESC2	Q06340	456 aa		4.97	□□□□□ -1.61
ULS1	YOR191W	PLP2	Q12017	286 aa		4.94	□□□□□ -1.62
ULS1	YOR191W	DIP2	Q12220	943 aa	Predicted RBP	4.94	□□□□□ -1.62
ULS1	YOR191W	SSN2	P38931	1420 aa		4.94	□□□□□ -1.62
ULS1	YOR191W	NUG1	P40010	520 aa	Known RBP	4.94	□□□□□ -1.62
ULS1	YOR191W	KRI1	P42846	591 aa	Known RBP	4.94	□□□□□ -1.62
ULS1	YOR191W	COG8	Q04632	607 aa		4.94	□□□□□ -1.62
ULS1	YOR191W	PAF1	P38351	445 aa		4.93	□□□□□ -1.62
ULS1	YOR191W	RPS0A	P32905	252 aa	Known RBP	4.93	□□□□□ -1.62
ULS1	YOR191W	NMD2	P38798	1089 aa	Known RBP	4.93	□□□□□ -1.62
ULS1	YOR191W	MSH4	P40965	878 aa	Predicted RBP	4.93	□□□□□ -1.62
ULS1	YOR191W	AVT3	P36062	692 aa		4.92	□□□□□ -1.62
ULS1	YOR191W	RPC31	P17890	251 aa		4.92	□□□□□ -1.62
ULS1	YOR191W	SMC3	P47037	1230 aa		4.91	□□□□□ -1.62
ULS1	YOR191W	NAP1	P25293	417 aa	Known RBP	4.91	□□□□□ -1.62
ULS1	YOR191W	NOP53	Q12080	455 aa	Known RBP	4.91	□□□□□ -1.62
ULS1	YOR191W	NST1	P53935	1240 aa		4.9	□□□□□ -1.62
ULS1	YOR191W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
ULS1	YOR191W	RPN1	P38764	993 aa	Known RBP	4.89	□□□□□ -1.63
ULS1	YOR191W	TOP1	P04786	769 aa		4.89	□□□□□ -1.63
ULS1	YOR191W	LEU3	P08638	886 aa		4.89	□□□□□ -1.63
ULS1	YOR191W	NNF2	P53253	936 aa		4.88	□□□□□ -1.63
ULS1	YOR191W	CWC22	P53333	577 aa	Known RBP	4.88	□□□□□ -1.63
ULS1	YOR191W	DOS2	P54858	310 aa		4.88	□□□□□ -1.63
ULS1	YOR191W	INO80	P53115	1489 aa		4.87	□□□□□ -1.63
ULS1	YOR191W	YMR124W	P39523	943 aa	Known RBP	4.87	□□□□□ -1.63
ULS1	YOR191W	SPP41	P38904	1435 aa		4.87	□□□□□ -1.63
ULS1	YOR191W	LTV1	P34078	463 aa		4.87	□□□□□ -1.63
ULS1	YOR191W	RLP24	Q07915	199 aa	Known RBP	4.87	□□□□□ -1.63
ULS1	YOR191W	SPT7	P35177	1332 aa		4.86	□□□□□ -1.63
ULS1	YOR191W	YGR130C	P53278	816 aa		4.86	□□□□□ -1.63
ULS1	YOR191W	HSC82	P15108	705 aa	Known RBP	4.85	□□□□□ -1.63
ULS1	YOR191W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
ULS1	YOR191W	TCD1	P38756	429 aa		4.84	□□□□□ -1.63
ULS1	YOR191W	RTT106	P40161	455 aa		4.84	□□□□□ -1.63
ULS1	YOR191W	TPM2	P40414	161 aa		4.84	□□□□□ -1.63
ULS1	YOR191W	DSN1	P40568	576 aa		4.84	□□□□□ -1.63
ULS1	YOR191W	NOP7	P53261	605 aa	Known RBP	4.84	□□□□□ -1.63
ULS1	YOR191W	RNT1	Q02555	471 aa		4.84	□□□□□ -1.63
ULS1	YOR191W	PRP3	Q03338	469 aa	Predicted RBP	4.84	□□□□□ -1.63
ULS1	YOR191W	TAN1	P53072	289 aa	Predicted RBP	4.84	□□□□□ -1.64
ULS1	YOR191W	VPS24	P36095	224 aa	Known RBP	4.83	□□□□□ -1.64
ULS1	YOR191W	MDM38	Q08179	573 aa		4.83	□□□□□ -1.64
ULS1	YOR191W	SMC4	Q12267	1418 aa		4.83	□□□□□ -1.64
ULS1	YOR191W	SNF7	P39929	240 aa	Known RBP	4.83	□□□□□ -1.64
ULS1	YOR191W	CDC11	P32458	415 aa		4.82	□□□□□ -1.64
ULS1	YOR191W	STH1	P32597	1359 aa		4.81	□□□□□ -1.64
ULS1	YOR191W	PIL1	P53252	339 aa	Known RBP	4.81	□□□□□ -1.64
ULS1	YOR191W	CLB1	P24868	471 aa		4.8	□□□□□ -1.64
ULS1	YOR191W	SPC110	P32380	944 aa		4.8	□□□□□ -1.64
ULS1	YOR191W	YSH1	Q06224	779 aa	Predicted RBP	4.8	□□□□□ -1.64
ULS1	YOR191W	DEP1	P31385	405 aa		4.79	□□□□□ -1.64
ULS1	YOR191W	IKI3	Q06706	1349 aa	Known RBP	4.78	□□□□□ -1.64
ULS1	YOR191W	YTA7	P40340	1379 aa		4.78	□□□□□ -1.64
ULS1	YOR191W	ZUO1	P32527	433 aa	Known RBP	4.78	□□□□□ -1.64
ULS1	YOR191W	VPS60	Q03390	229 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms