RNA–Protein interactions for RNA: YJL012C

VTC4, Transcript of Vacuolar membrane polyphosphate polymerase, yeastyeast

Gene VTC4, Length 2,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTC4YJL012C MTC1P47018 478 aaKnown RBP7.62□□□□□ -1.19
VTC4YJL012C DRS1P32892 752 aaKnown RBP7.61□□□□□ -1.19
VTC4YJL012C BFR2Q06631 534 aaKnown RBP6.53□□□□□ -1.36
VTC4YJL012C DIP2Q12220 943 aaPredicted RBP6.51□□□□□ -1.37
VTC4YJL012C AVT3P36062 692 aa6.5□□□□□ -1.37
VTC4YJL012C MON2P48563 1636 aaPredicted RBP6.39□□□□□ -1.39
VTC4YJL012C INO80P53115 1489 aa6.31□□□□□ -1.4
VTC4YJL012C TFA1P36100 482 aa6.21□□□□□ -1.42
VTC4YJL012C FAP1P53971 965 aa6.17□□□□□ -1.42
VTC4YJL012C PRI1P10363 409 aa6.16□□□□□ -1.42
VTC4YJL012C RPG1P38249 964 aaKnown RBP6.12□□□□□ -1.43
VTC4YJL012C ISW2Q08773 1120 aa6.07□□□□□ -1.44
VTC4YJL012C RSE1Q04693 1361 aaKnown RBP6.07□□□□□ -1.44
VTC4YJL012C DNA2P38859 1522 aa6.01□□□□□ -1.45
VTC4YJL012C AAD16Q02895 342 aa5.97□□□□□ -1.45
VTC4YJL012C KOG1P38873 1557 aa5.93□□□□□ -1.46
VTC4YJL012C RPL17AP05740 184 aaKnown RBP5.89□□□□□ -1.47
VTC4YJL012C RPL17BP46990 184 aaKnown RBP5.89□□□□□ -1.47
VTC4YJL012C TSR3Q12094 313 aaKnown RBP5.86□□□□□ -1.47
VTC4YJL012C SWR1Q05471 1514 aa5.82□□□□□ -1.48
VTC4YJL012C YCK3P39962 524 aa5.82□□□□□ -1.48
VTC4YJL012C PRY3P47033 881 aa5.82□□□□□ -1.48
VTC4YJL012C SPT21P35209 758 aa5.79□□□□□ -1.48
VTC4YJL012C SPA2P23201 1466 aaKnown RBP5.77□□□□□ -1.49
VTC4YJL012C REB1P21538 810 aa5.72□□□□□ -1.49
VTC4YJL012C RIM101P33400 625 aa5.67□□□□□ -1.5
VTC4YJL012C YKR023WP36119 530 aaKnown RBP5.63□□□□□ -1.51
VTC4YJL012C TY1B-DR4Q07793 1604 aa5.57□□□□□ -1.52
VTC4YJL012C OXP1P28273 1286 aa5.57□□□□□ -1.52
VTC4YJL012C MIF2P35201 549 aa5.55□□□□□ -1.52
VTC4YJL012C TCB3Q03640 1545 aaKnown RBP5.52□□□□□ -1.53
VTC4YJL012C CDC27P38042 758 aa5.52□□□□□ -1.53
VTC4YJL012C DCD1P06773 312 aa5.5□□□□□ -1.53
VTC4YJL012C HOP09932 586 aa5.48□□□□□ -1.53
VTC4YJL012C MRPL32P25348 183 aa5.47□□□□□ -1.53
VTC4YJL012C TFC8Q12308 588 aa5.45□□□□□ -1.54
VTC4YJL012C PTP3P40048 928 aa5.42□□□□□ -1.54
VTC4YJL012C HAA1Q12753 694 aaKnown RBP5.41□□□□□ -1.54
VTC4YJL012C SGS1P35187 1447 aa5.38□□□□□ -1.55
VTC4YJL012C YLR271WQ06152 274 aa5.38□□□□□ -1.55
VTC4YJL012C YAH1Q12184 172 aaKnown RBP5.35□□□□□ -1.55
VTC4YJL012C SSP1P38871 571 aa5.33□□□□□ -1.56
VTC4YJL012C BCH2P36122 765 aa5.32□□□□□ -1.56
VTC4YJL012C REV3P14284 1504 aa5.32□□□□□ -1.56
VTC4YJL012C ECM5Q03214 1411 aa5.29□□□□□ -1.56
VTC4YJL012C THO2P53552 1597 aaKnown RBP5.29□□□□□ -1.56
VTC4YJL012C YFR006WP43590 535 aa5.27□□□□□ -1.57
VTC4YJL012C RSM7P47150 247 aa5.26□□□□□ -1.57
VTC4YJL012C YIL055CP40523 627 aaKnown RBP5.25□□□□□ -1.57
VTC4YJL012C SSN2P38931 1420 aa5.25□□□□□ -1.57
VTC4YJL012C CST9Q06032 482 aa5.24□□□□□ -1.57
VTC4YJL012C MDS3P53094 1487 aa5.23□□□□□ -1.57
VTC4YJL012C BUD4P47136 1447 aa5.23□□□□□ -1.57
VTC4YJL012C MAP2P38174 421 aaKnown RBP5.22□□□□□ -1.57
VTC4YJL012C PSD2P53037 1138 aaKnown RBP5.21□□□□□ -1.58
VTC4YJL012C SPT6P23615 1451 aaKnown RBP5.21□□□□□ -1.58
VTC4YJL012C HSL1P34244 1518 aa5.2□□□□□ -1.58
VTC4YJL012C AI2P03876 854 aa5.19□□□□□ -1.58
VTC4YJL012C EPS1P40557 701 aa5.18□□□□□ -1.58
VTC4YJL012C BDF1P35817 686 aa5.17□□□□□ -1.58
VTC4YJL012C PEP1P32319 1579 aa5.17□□□□□ -1.58
VTC4YJL012C BPT1P14772 1559 aa5.16□□□□□ -1.58
VTC4YJL012C SCY1P53009 804 aa5.16□□□□□ -1.58
VTC4YJL012C DMA1P38823 416 aa5.14□□□□□ -1.59
VTC4YJL012C MGA2P40578 1113 aa5.14□□□□□ -1.59
VTC4YJL012C YGL015CP33199 130 aa5.11□□□□□ -1.59
VTC4YJL012C RCR1P38212 213 aa5.11□□□□□ -1.59
VTC4YJL012C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
VTC4YJL012C UBP10P53874 792 aaPredicted RBP5.09□□□□□ -1.59
VTC4YJL012C MYO2P19524 1574 aaKnown RBP5.08□□□□□ -1.6
VTC4YJL012C YCF1P39109 1515 aaKnown RBP5.06□□□□□ -1.6
VTC4YJL012C HIR3P47171 1648 aa5.06□□□□□ -1.6
VTC4YJL012C LTE1P07866 1435 aa5.05□□□□□ -1.6
VTC4YJL012C MRM1P25270 412 aa5.04□□□□□ -1.6
VTC4YJL012C BNI1P41832 1953 aa5.03□□□□□ -1.6
VTC4YJL012C ABP1P15891 592 aaKnown RBP5.02□□□□□ -1.61
VTC4YJL012C DNF1P32660 1571 aa5.02□□□□□ -1.61
VTC4YJL012C RAM2P29703 316 aa5.02□□□□□ -1.61
VTC4YJL012C BBC1P47068 1157 aa5.02□□□□□ -1.61
VTC4YJL012C MET5P47169 1442 aa5□□□□□ -1.61
VTC4YJL012C VPS29P38759 282 aa4.99□□□□□ -1.61
VTC4YJL012C SLX5P32828 619 aaKnown RBP4.99□□□□□ -1.61
VTC4YJL012C RPA190P10964 1664 aaKnown RBP4.98□□□□□ -1.61
VTC4YJL012C IRC20Q06554 1556 aa4.98□□□□□ -1.61
VTC4YJL012C CDC25P04821 1589 aa4.98□□□□□ -1.61
VTC4YJL012C ATG2P53855 1592 aa4.98□□□□□ -1.61
VTC4YJL012C SSK2P53599 1579 aa4.96□□□□□ -1.62
VTC4YJL012C TAF2P23255 1407 aa4.95□□□□□ -1.62
VTC4YJL012C ESC1Q03661 1658 aaKnown RBP4.95□□□□□ -1.62
VTC4YJL012C GEA2P39993 1459 aaKnown RBP4.92□□□□□ -1.62
VTC4YJL012C STS1P38637 319 aa4.92□□□□□ -1.62
VTC4YJL012C RTG3P38165 486 aa4.91□□□□□ -1.62
VTC4YJL012C MMS1Q06211 1407 aa4.89□□□□□ -1.63
VTC4YJL012C XRN1P22147 1528 aaKnown RBP4.89□□□□□ -1.63
VTC4YJL012C SAS10Q12136 610 aaPredicted RBP4.88□□□□□ -1.63
VTC4YJL012C RPO31P04051 1460 aa4.87□□□□□ -1.63
VTC4YJL012C ITT1Q04638 464 aa4.87□□□□□ -1.63
VTC4YJL012C RQC2Q12532 1038 aaKnown RBP4.87□□□□□ -1.63
VTC4YJL012C TGL3P40308 642 aa4.86□□□□□ -1.63
VTC4YJL012C EDS1P38073 919 aa4.85□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms