RNA–Protein interactions for RNA: YBR291C

CTP1, Transcript of Mitochondrial inner membrane citrate transporter, yeastyeast

Gene CTP1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTP1YBR291C MTC1P47018 478 aaKnown RBP11.8□□□□□ -0.52
CTP1YBR291C FAP1P53971 965 aa11.45□□□□□ -0.58
CTP1YBR291C DRS1P32892 752 aaKnown RBP10.99□□□□□ -0.65
CTP1YBR291C PRY3P47033 881 aa10.73□□□□□ -0.69
CTP1YBR291C AAD16Q02895 342 aa10.35□□□□□ -0.75
CTP1YBR291C PRI1P10363 409 aa10.3□□□□□ -0.76
CTP1YBR291C HAA1Q12753 694 aaKnown RBP10.07□□□□□ -0.8
CTP1YBR291C ISW2Q08773 1120 aa10.03□□□□□ -0.8
CTP1YBR291C YCK3P39962 524 aa9.87□□□□□ -0.83
CTP1YBR291C RPG1P38249 964 aaKnown RBP9.84□□□□□ -0.83
CTP1YBR291C TSR3Q12094 313 aaKnown RBP9.68□□□□□ -0.86
CTP1YBR291C BFR2Q06631 534 aaKnown RBP9.57□□□□□ -0.88
CTP1YBR291C MRPL32P25348 183 aa9.42□□□□□ -0.9
CTP1YBR291C DIP2Q12220 943 aaPredicted RBP9.33□□□□□ -0.92
CTP1YBR291C AVT3P36062 692 aa9.26□□□□□ -0.93
CTP1YBR291C RSE1Q04693 1361 aaKnown RBP9.25□□□□□ -0.93
CTP1YBR291C YGL015CP33199 130 aa9.21□□□□□ -0.94
CTP1YBR291C TFA1P36100 482 aa9.18□□□□□ -0.94
CTP1YBR291C REB1P21538 810 aa9.07□□□□□ -0.96
CTP1YBR291C RPL17AP05740 184 aaKnown RBP8.97□□□□□ -0.97
CTP1YBR291C RPL17BP46990 184 aaKnown RBP8.97□□□□□ -0.97
CTP1YBR291C BUD31P25337 157 aaPredicted RBP8.68□□□□□ -1.02
CTP1YBR291C CDC27P38042 758 aa8.67□□□□□ -1.02
CTP1YBR291C UBP10P53874 792 aaPredicted RBP8.66□□□□□ -1.02
CTP1YBR291C MAP2P38174 421 aaKnown RBP8.52□□□□□ -1.05
CTP1YBR291C YKR023WP36119 530 aaKnown RBP8.49□□□□□ -1.05
CTP1YBR291C SPT21P35209 758 aa8.44□□□□□ -1.06
CTP1YBR291C TIF4632P39936 914 aaKnown RBP8.39□□□□□ -1.07
CTP1YBR291C TFC8Q12308 588 aa8.37□□□□□ -1.07
CTP1YBR291C HOP09932 586 aa8.35□□□□□ -1.07
CTP1YBR291C UBP9P39967 754 aa8.32□□□□□ -1.08
CTP1YBR291C DCD1P06773 312 aa8.3□□□□□ -1.08
CTP1YBR291C SIS1P25294 352 aaKnown RBP8.27□□□□□ -1.09
CTP1YBR291C TGL3P40308 642 aa8.27□□□□□ -1.09
CTP1YBR291C SCY1P53009 804 aa8.27□□□□□ -1.09
CTP1YBR291C SLX5P32828 619 aaKnown RBP8.26□□□□□ -1.09
CTP1YBR291C RIM101P33400 625 aa8.06□□□□□ -1.12
CTP1YBR291C BCH2P36122 765 aa8.05□□□□□ -1.12
CTP1YBR291C RQC2Q12532 1038 aaKnown RBP7.99□□□□□ -1.13
CTP1YBR291C EPS1P40557 701 aa7.84□□□□□ -1.15
CTP1YBR291C PTP3P40048 928 aa7.82□□□□□ -1.16
CTP1YBR291C YOR238WQ08634 303 aa7.81□□□□□ -1.16
CTP1YBR291C BDF1P35817 686 aa7.8□□□□□ -1.16
CTP1YBR291C OXP1P28273 1286 aa7.79□□□□□ -1.16
CTP1YBR291C MST1P07236 462 aa7.78□□□□□ -1.16
CTP1YBR291C YBL029C-AQ3E756 94 aa7.78□□□□□ -1.16
CTP1YBR291C YIL055CP40523 627 aaKnown RBP7.77□□□□□ -1.17
CTP1YBR291C SSP1P38871 571 aa7.76□□□□□ -1.17
CTP1YBR291C NSR1P27476 414 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
CTP1YBR291C BBC1P47068 1157 aa7.71□□□□□ -1.18
CTP1YBR291C YAP5P40574 245 aa7.68□□□□□ -1.18
CTP1YBR291C VNX1P42839 908 aa7.67□□□□□ -1.18
CTP1YBR291C SPP1Q03012 353 aa7.67□□□□□ -1.18
CTP1YBR291C YAH1Q12184 172 aaKnown RBP7.65□□□□□ -1.18
CTP1YBR291C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
CTP1YBR291C YJL171CP46992 396 aa7.62□□□□□ -1.19
CTP1YBR291C YLR271WQ06152 274 aa7.61□□□□□ -1.19
CTP1YBR291C WSC3Q12215 556 aa7.6□□□□□ -1.19
CTP1YBR291C GTT3P39996 337 aa7.59□□□□□ -1.19
CTP1YBR291C RSM7P47150 247 aa7.58□□□□□ -1.2
CTP1YBR291C DMA1P38823 416 aa7.56□□□□□ -1.2
CTP1YBR291C AI2P03876 854 aa7.55□□□□□ -1.2
CTP1YBR291C TIF11P38912 153 aaKnown RBP7.53□□□□□ -1.2
CTP1YBR291C MGA2P40578 1113 aa7.5□□□□□ -1.21
CTP1YBR291C FKH1P40466 484 aa7.48□□□□□ -1.21
CTP1YBR291C AIR2Q12476 344 aaKnown RBP7.48□□□□□ -1.21
CTP1YBR291C PSD2P53037 1138 aaKnown RBP7.42□□□□□ -1.22
CTP1YBR291C BMT6Q12291 365 aa7.41□□□□□ -1.22
CTP1YBR291C LDB19Q12502 818 aa7.41□□□□□ -1.22
CTP1YBR291C ULI1P43604 169 aa7.4□□□□□ -1.22
CTP1YBR291C CST9Q06032 482 aa7.36□□□□□ -1.23
CTP1YBR291C EAP1P36041 632 aaKnown RBP7.35□□□□□ -1.23
CTP1YBR291C MSB4Q12317 492 aa7.35□□□□□ -1.23
CTP1YBR291C IOC2Q12072 812 aa7.31□□□□□ -1.24
CTP1YBR291C PIB1Q06651 286 aa7.3□□□□□ -1.24
CTP1YBR291C MRM1P25270 412 aa7.24□□□□□ -1.25
CTP1YBR291C RTG1P32607 177 aa7.23□□□□□ -1.25
CTP1YBR291C NCR1Q12200 1170 aa7.21□□□□□ -1.26
CTP1YBR291C TFG1P41895 735 aaPredicted RBP7.2□□□□□ -1.26
CTP1YBR291C YOL036WQ08206 761 aa7.2□□□□□ -1.26
CTP1YBR291C SET4P42948 560 aa7.19□□□□□ -1.26
CTP1YBR291C SAS10Q12136 610 aaPredicted RBP7.19□□□□□ -1.26
CTP1YBR291C TRP5P00931 707 aaKnown RBP7.18□□□□□ -1.26
CTP1YBR291C YNL035CP53962 389 aaKnown RBP7.18□□□□□ -1.26
CTP1YBR291C SEC61P32915 480 aa7.17□□□□□ -1.26
CTP1YBR291C YMR1P47147 688 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
CTP1YBR291C RAM2P29703 316 aa7.15□□□□□ -1.26
CTP1YBR291C RTG3P38165 486 aa7.13□□□□□ -1.27
CTP1YBR291C DBP1P24784 617 aaKnown RBP7.11□□□□□ -1.27
CTP1YBR291C RCR1P38212 213 aa7.1□□□□□ -1.27
CTP1YBR291C ABP1P15891 592 aaKnown RBP7.07□□□□□ -1.28
CTP1YBR291C VMA1P17255 1071 aaKnown RBP7.07□□□□□ -1.28
CTP1YBR291C MAK11P20484 414 aaKnown RBP7.05□□□□□ -1.28
CTP1YBR291C JIP4Q03361 876 aa7.05□□□□□ -1.28
CTP1YBR291C SAM3Q08986 587 aa7.05□□□□□ -1.28
CTP1YBR291C YFR006WP43590 535 aa7.04□□□□□ -1.28
CTP1YBR291C BCK2P33306 851 aa7.03□□□□□ -1.28
CTP1YBR291C VPS29P38759 282 aa7.03□□□□□ -1.28
CTP1YBR291C SET1P38827 1080 aaKnown RBP7.03□□□□□ -1.28
CTP1YBR291C LEU3P08638 886 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms