RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C MTC1P47018 478 aaKnown RBP14.84□□□□□ -0.03
SUB1YMR039C DRS1P32892 752 aaKnown RBP14.25□□□□□ -0.13
SUB1YMR039C FAP1P53971 965 aa13.62□□□□□ -0.23
SUB1YMR039C PRY3P47033 881 aa12.82□□□□□ -0.36
SUB1YMR039C PRI1P10363 409 aa12.54□□□□□ -0.4
SUB1YMR039C AAD16Q02895 342 aa12.53□□□□□ -0.4
SUB1YMR039C DIP2Q12220 943 aaPredicted RBP12.34□□□□□ -0.43
SUB1YMR039C ISW2Q08773 1120 aa12.2□□□□□ -0.46
SUB1YMR039C YCK3P39962 524 aa12.17□□□□□ -0.46
SUB1YMR039C BFR2Q06631 534 aaKnown RBP12.05□□□□□ -0.48
SUB1YMR039C AVT3P36062 692 aa12.04□□□□□ -0.48
SUB1YMR039C HAA1Q12753 694 aaKnown RBP12.04□□□□□ -0.48
SUB1YMR039C RPG1P38249 964 aaKnown RBP12.03□□□□□ -0.48
SUB1YMR039C RSE1Q04693 1361 aaKnown RBP11.83□□□□□ -0.52
SUB1YMR039C TSR3Q12094 313 aaKnown RBP11.78□□□□□ -0.52
SUB1YMR039C RPL17AP05740 184 aaKnown RBP11.41□□□□□ -0.58
SUB1YMR039C RPL17BP46990 184 aaKnown RBP11.41□□□□□ -0.58
SUB1YMR039C MRPL32P25348 183 aa11.34□□□□□ -0.59
SUB1YMR039C REB1P21538 810 aa11.33□□□□□ -0.6
SUB1YMR039C YGL015CP33199 130 aa11.07□□□□□ -0.64
SUB1YMR039C SPT21P35209 758 aa10.97□□□□□ -0.65
SUB1YMR039C TFA1P36100 482 aa10.96□□□□□ -0.65
SUB1YMR039C YKR023WP36119 530 aaKnown RBP10.74□□□□□ -0.69
SUB1YMR039C RIM101P33400 625 aa10.7□□□□□ -0.7
SUB1YMR039C CDC27P38042 758 aa10.68□□□□□ -0.7
SUB1YMR039C TFC8Q12308 588 aa10.53□□□□□ -0.72
SUB1YMR039C HOP09932 586 aa10.48□□□□□ -0.73
SUB1YMR039C UBP10P53874 792 aaPredicted RBP10.46□□□□□ -0.73
SUB1YMR039C DCD1P06773 312 aa10.41□□□□□ -0.74
SUB1YMR039C MAP2P38174 421 aaKnown RBP10.4□□□□□ -0.74
SUB1YMR039C BUD31P25337 157 aaPredicted RBP10.39□□□□□ -0.75
SUB1YMR039C OXP1P28273 1286 aa10.32□□□□□ -0.76
SUB1YMR039C BCH2P36122 765 aa10.18□□□□□ -0.78
SUB1YMR039C YIL055CP40523 627 aaKnown RBP10.18□□□□□ -0.78
SUB1YMR039C PTP3P40048 928 aa10.13□□□□□ -0.79
SUB1YMR039C SCY1P53009 804 aa10.13□□□□□ -0.79
SUB1YMR039C RSM7P47150 247 aa10.04□□□□□ -0.8
SUB1YMR039C YAH1Q12184 172 aaKnown RBP10.04□□□□□ -0.8
SUB1YMR039C TGL3P40308 642 aa10.02□□□□□ -0.81
SUB1YMR039C SLX5P32828 619 aaKnown RBP10.01□□□□□ -0.81
SUB1YMR039C TIF4632P39936 914 aaKnown RBP10.01□□□□□ -0.81
SUB1YMR039C EPS1P40557 701 aa9.97□□□□□ -0.81
SUB1YMR039C SSP1P38871 571 aa9.95□□□□□ -0.82
SUB1YMR039C YLR271WQ06152 274 aa9.93□□□□□ -0.82
SUB1YMR039C BDF1P35817 686 aa9.92□□□□□ -0.82
SUB1YMR039C AI2P03876 854 aa9.89□□□□□ -0.83
SUB1YMR039C BBC1P47068 1157 aa9.89□□□□□ -0.83
SUB1YMR039C UBP9P39967 754 aa9.86□□□□□ -0.83
SUB1YMR039C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.84□□□□□ -0.83not detected
SUB1YMR039C SIS1P25294 352 aaKnown RBP9.8□□□□□ -0.84
SUB1YMR039C PSD2P53037 1138 aaKnown RBP9.76□□□□□ -0.85
SUB1YMR039C MGA2P40578 1113 aa9.66□□□□□ -0.86
SUB1YMR039C NSR1P27476 414 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
SUB1YMR039C CST9Q06032 482 aa9.59□□□□□ -0.87
SUB1YMR039C MST1P07236 462 aa9.56□□□□□ -0.88
SUB1YMR039C MRM1P25270 412 aa9.55□□□□□ -0.88
SUB1YMR039C YAP5P40574 245 aa9.49□□□□□ -0.89
SUB1YMR039C YOR238WQ08634 303 aa9.49□□□□□ -0.89
SUB1YMR039C YBL029C-AQ3E756 94 aa9.42□□□□□ -0.9
SUB1YMR039C RTG3P38165 486 aa9.41□□□□□ -0.9
SUB1YMR039C VPS29P38759 282 aa9.36□□□□□ -0.91
SUB1YMR039C VNX1P42839 908 aa9.34□□□□□ -0.91
SUB1YMR039C YMR1P47147 688 aaKnown RBP RIP-Chip data9.32□□□□□ -0.92not detected
SUB1YMR039C RCR1P38212 213 aa9.31□□□□□ -0.92
SUB1YMR039C DBP1P24784 617 aaKnown RBP9.26□□□□□ -0.93
SUB1YMR039C GTT3P39996 337 aa9.25□□□□□ -0.93
SUB1YMR039C PIB1Q06651 286 aa9.25□□□□□ -0.93
SUB1YMR039C STS1P38637 319 aa9.23□□□□□ -0.93
SUB1YMR039C SPP1Q03012 353 aa9.22□□□□□ -0.93
SUB1YMR039C YFR006WP43590 535 aa9.2□□□□□ -0.94
SUB1YMR039C RAM2P29703 316 aa9.18□□□□□ -0.94
SUB1YMR039C WSC3Q12215 556 aa9.17□□□□□ -0.94
SUB1YMR039C VMA1P17255 1071 aaKnown RBP9.14□□□□□ -0.95
SUB1YMR039C MAK11P20484 414 aaKnown RBP9.12□□□□□ -0.95
SUB1YMR039C TIF11P38912 153 aaKnown RBP9.12□□□□□ -0.95
SUB1YMR039C AIR2Q12476 344 aaKnown RBP9.11□□□□□ -0.95
SUB1YMR039C SAM3Q08986 587 aa9.1□□□□□ -0.95
SUB1YMR039C MSB4Q12317 492 aa9.1□□□□□ -0.95
SUB1YMR039C FKH1P40466 484 aa9.06□□□□□ -0.96
SUB1YMR039C YOL036WQ08206 761 aa9.06□□□□□ -0.96
SUB1YMR039C SET4P42948 560 aa9.02□□□□□ -0.97
SUB1YMR039C EAP1P36041 632 aaKnown RBP9.01□□□□□ -0.97
SUB1YMR039C YJL171CP46992 396 aa9.01□□□□□ -0.97
SUB1YMR039C ULI1P43604 169 aa8.99□□□□□ -0.97
SUB1YMR039C IOC2Q12072 812 aa8.99□□□□□ -0.97
SUB1YMR039C COQ8P27697 501 aa8.98□□□□□ -0.97
SUB1YMR039C MIF2P35201 549 aa8.98□□□□□ -0.97
SUB1YMR039C ABP1P15891 592 aaKnown RBP8.97□□□□□ -0.97
SUB1YMR039C EDS1P38073 919 aa8.96□□□□□ -0.98
SUB1YMR039C GYP5Q12344 894 aa8.96□□□□□ -0.98
SUB1YMR039C LDB19Q12502 818 aa8.96□□□□□ -0.98
SUB1YMR039C PTC3P34221 468 aaKnown RBP8.93□□□□□ -0.98
SUB1YMR039C TRP5P00931 707 aaKnown RBP8.92□□□□□ -0.98
SUB1YMR039C NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
SUB1YMR039C GRE2Q12068 342 aaKnown RBP8.9□□□□□ -0.98
SUB1YMR039C HTA1P04911 132 aaKnown RBP8.87□□□□□ -0.99
SUB1YMR039C HTA2P04912 132 aa8.87□□□□□ -0.99
SUB1YMR039C BMT6Q12291 365 aa8.87□□□□□ -0.99
SUB1YMR039C GUT1P32190 709 aa8.86□□□□□ -0.99
SUB1YMR039C DCW1P36091 449 aa8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms